RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 ANP32AP39687 249 aaKnown RBP13.09□□□□□ -0.31
FOXO3-203ENST00000540898 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
FOXO3-203ENST00000540898 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
FOXO3-203ENST00000540898 ARHGEF25Q86VW2 580 aa13.09□□□□□ -0.31
FOXO3-203ENST00000540898 MED1Q15648 1581 aaPredicted RBP13.09□□□□□ -0.31
FOXO3-203ENST00000540898 RGPD5Q99666 1765 aa13.09□□□□□ -0.31
FOXO3-203ENST00000540898 GNAI1P63096 354 aa13.09□□□□□ -0.31
FOXO3-203ENST00000540898 EIF5BO60841 1220 aaKnown RBP13.08□□□□□ -0.32
FOXO3-203ENST00000540898 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
FOXO3-203ENST00000540898 TMEM57Q8N5G2 664 aa13.08□□□□□ -0.32
FOXO3-203ENST00000540898 ZKSCAN2Q63HK3 967 aa13.08□□□□□ -0.32
FOXO3-203ENST00000540898 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
FOXO3-203ENST00000540898 CRB1P82279 1406 aa13.07□□□□□ -0.32
FOXO3-203ENST00000540898 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
FOXO3-203ENST00000540898 MSH6P52701 1360 aa13.07□□□□□ -0.32
FOXO3-203ENST00000540898 DZIP1LQ8IYY4 767 aaKnown RBP13.07□□□□□ -0.32
FOXO3-203ENST00000540898 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 FTSJ3Q8IY81 847 aaKnown RBP13.06□□□□□ -0.32
FOXO3-203ENST00000540898 USP19O94966 1318 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 CHL1O00533 1208 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 RGS3P49796 1198 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 MRPL50Q8N5N7 158 aaKnown RBP13.06□□□□□ -0.32
FOXO3-203ENST00000540898 ANKRD24Q8TF21 1146 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
FOXO3-203ENST00000540898 ALS2Q96Q42 1657 aa13.05□□□□□ -0.32
FOXO3-203ENST00000540898 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
FOXO3-203ENST00000540898 SLIT3O75094 1523 aa13.05□□□□□ -0.32
FOXO3-203ENST00000540898 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
FOXO3-203ENST00000540898 MVPQ14764 893 aaKnown RBP13.05□□□□□ -0.32
FOXO3-203ENST00000540898 KCNH5Q8NCM2 988 aa13.05□□□□□ -0.32
FOXO3-203ENST00000540898 C1orf115Q9H7X2 142 aa13.04□□□□□ -0.32
FOXO3-203ENST00000540898 PXDNQ92626 1479 aa13.04□□□□□ -0.32
FOXO3-203ENST00000540898 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
FOXO3-203ENST00000540898 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
FOXO3-203ENST00000540898 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
FOXO3-203ENST00000540898 RTL1A6NKG5 1358 aa13.03□□□□□ -0.32
FOXO3-203ENST00000540898 KCNQ3O43525 872 aa13.02□□□□□ -0.32
FOXO3-203ENST00000540898 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.32
FOXO3-203ENST00000540898 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.32
FOXO3-203ENST00000540898 SLAIN2Q9P270 581 aa13.02□□□□□ -0.32
FOXO3-203ENST00000540898 GNAT3A8MTJ3 354 aa13.02□□□□□ -0.33
FOXO3-203ENST00000540898 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
FOXO3-203ENST00000540898 CENPQQ7L2Z9 268 aaPredicted RBP13.02□□□□□ -0.33
FOXO3-203ENST00000540898 PKNOX2Q96KN3 472 aa13.02□□□□□ -0.33
FOXO3-203ENST00000540898 G2E3Q7L622 706 aa13.01□□□□□ -0.33
FOXO3-203ENST00000540898 GAS2L2Q8NHY3 880 aa13.01□□□□□ -0.33
FOXO3-203ENST00000540898 KIF24Q5T7B8 1368 aa13.01□□□□□ -0.33
FOXO3-203ENST00000540898 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
FOXO3-203ENST00000540898 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
FOXO3-203ENST00000540898 DCCP43146 1447 aa13.01□□□□□ -0.33
FOXO3-203ENST00000540898 KIAA0232Q92628 1395 aa13□□□□□ -0.33
FOXO3-203ENST00000540898 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
FOXO3-203ENST00000540898 ALDH1L2Q3SY69 923 aa13□□□□□ -0.33
FOXO3-203ENST00000540898 MAP3K5Q99683 1374 aa13□□□□□ -0.33
FOXO3-203ENST00000540898 ERBB3P21860 1342 aa13□□□□□ -0.33
FOXO3-203ENST00000540898 TNS3Q68CZ2 1445 aa12.99□□□□□ -0.33
FOXO3-203ENST00000540898 NLRP2Q9NX02 1062 aa12.99□□□□□ -0.33
FOXO3-203ENST00000540898 KIF16BQ96L93 1317 aa12.99□□□□□ -0.33
FOXO3-203ENST00000540898 ZNF530Q6P9A1 599 aaPredicted RBP12.99□□□□□ -0.33
FOXO3-203ENST00000540898 USP35Q9P2H5 1018 aa12.99□□□□□ -0.33
FOXO3-203ENST00000540898 PHRF1Q9P1Y6 1649 aaKnown RBP12.98□□□□□ -0.33
FOXO3-203ENST00000540898 F6X3S4 739 aa12.98□□□□□ -0.33
FOXO3-203ENST00000540898 PDE4AP27815 886 aa12.97□□□□□ -0.33
FOXO3-203ENST00000540898 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
FOXO3-203ENST00000540898 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
FOXO3-203ENST00000540898 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
FOXO3-203ENST00000540898 RGS12O14924 1447 aa12.96□□□□□ -0.33
FOXO3-203ENST00000540898 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
FOXO3-203ENST00000540898 PRAMEF22A3QJZ6 481 aa12.96□□□□□ -0.34
FOXO3-203ENST00000540898 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.34
FOXO3-203ENST00000540898 COL18A1P39060 1754 aa12.95□□□□□ -0.34
FOXO3-203ENST00000540898 ANXA1P04083 346 aa12.95□□□□□ -0.34
FOXO3-203ENST00000540898 CSB-PGBD3P0DP91 1061 aa12.95□□□□□ -0.34
FOXO3-203ENST00000540898 MEGF6O75095 1541 aa12.95□□□□□ -0.34
FOXO3-203ENST00000540898 CRYBG1Q9Y4K1 1723 aa12.95□□□□□ -0.34
FOXO3-203ENST00000540898 ZBTB7BO15156 539 aaPredicted RBP12.95□□□□□ -0.34
FOXO3-203ENST00000540898 IPO8O15397 1037 aaKnown RBP12.95□□□□□ -0.34
FOXO3-203ENST00000540898 PDZRN3Q9UPQ7 1066 aa12.95□□□□□ -0.34
FOXO3-203ENST00000540898 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
FOXO3-203ENST00000540898 ABCC4O15439 1325 aa12.94□□□□□ -0.34
FOXO3-203ENST00000540898 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
FOXO3-203ENST00000540898 TAF7Q15545 349 aaPredicted RBP12.94□□□□□ -0.34
FOXO3-203ENST00000540898 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
FOXO3-203ENST00000540898 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
FOXO3-203ENST00000540898 SIRT2Q8IXJ6 389 aa12.93□□□□□ -0.34
FOXO3-203ENST00000540898 ZNF428Q96B54 188 aa12.93□□□□□ -0.34
FOXO3-203ENST00000540898 BACH2Q9BYV9 841 aa12.93□□□□□ -0.34
FOXO3-203ENST00000540898 EIF2S2P20042 333 aaKnown RBP12.93□□□□□ -0.34
FOXO3-203ENST00000540898 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
FOXO3-203ENST00000540898 PLEKHO1Q53GL0 409 aaPredicted RBP12.92□□□□□ -0.34
FOXO3-203ENST00000540898 SLC4A10Q6U841 1118 aa12.92□□□□□ -0.34
FOXO3-203ENST00000540898 PHAXQ9H814 394 aaKnown RBP12.92□□□□□ -0.34
FOXO3-203ENST00000540898 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
FOXO3-203ENST00000540898 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
FOXO3-203ENST00000540898 SLC39A6Q13433 755 aa12.91□□□□□ -0.34
FOXO3-203ENST00000540898 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
FOXO3-203ENST00000540898 FAM208AQ9UK61 1670 aaKnown RBP12.91□□□□□ -0.34
FOXO3-203ENST00000540898 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms