RNA–Protein interactions for RNA: ENST00000540887.1

STIP1-210, Transcript of stress induced phosphoprotein 1, humanhuman

TSL 2

Gene STIP1, Length 877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STIP1-210ENST00000540887 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
STIP1-210ENST00000540887 DDX54Q8TDD1 881 aaKnown RBP20.83■□□□□ 0.93
STIP1-210ENST00000540887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.933e-7■■□□□ 14.2
STIP1-210ENST00000540887 SPG7Q9UQ90 795 aa20.83■□□□□ 0.93
STIP1-210ENST00000540887 NUDCQ9Y266 331 aa20.83■□□□□ 0.93
STIP1-210ENST00000540887 BCL9O00512 1426 aa20.83■□□□□ 0.93
STIP1-210ENST00000540887 SULT6B1Q6IMI4 303 aa20.82■□□□□ 0.92
STIP1-210ENST00000540887 MYBBP1AQ9BQG0 1328 aaKnown RBP20.81■□□□□ 0.92
STIP1-210ENST00000540887 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
STIP1-210ENST00000540887 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
STIP1-210ENST00000540887 KDRP35968 1356 aa20.81■□□□□ 0.92
STIP1-210ENST00000540887 U2SURPO15042 1029 aaKnown RBP20.8■□□□□ 0.92
STIP1-210ENST00000540887 PRKRIP1Q9H875 184 aaPredicted RBP20.8■□□□□ 0.92
STIP1-210ENST00000540887 PKD1L3Q7Z443 1732 aa20.8■□□□□ 0.92
STIP1-210ENST00000540887 SHANK3Q9BYB0 1731 aa20.79■□□□□ 0.92
STIP1-210ENST00000540887 TRIM37O94972 964 aa20.79■□□□□ 0.92
STIP1-210ENST00000540887 AEBP1Q8IUX7 1158 aa20.79■□□□□ 0.92
STIP1-210ENST00000540887 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
STIP1-210ENST00000540887 AMOTQ4VCS5 1084 aa20.78■□□□□ 0.92
STIP1-210ENST00000540887 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
STIP1-210ENST00000540887 BAG6P46379 1132 aa20.77■□□□□ 0.92
STIP1-210ENST00000540887 HMOX1P09601 288 aa20.76■□□□□ 0.91
STIP1-210ENST00000540887 BCL11BQ9C0K0 894 aaPredicted RBP20.76■□□□□ 0.91
STIP1-210ENST00000540887 TNS1Q9HBL0 1735 aaKnown RBP20.75■□□□□ 0.91
STIP1-210ENST00000540887 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
STIP1-210ENST00000540887 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
STIP1-210ENST00000540887 CYP27B1O15528 508 aa20.73■□□□□ 0.91
STIP1-210ENST00000540887 ANP32CO43423 234 aa20.73■□□□□ 0.91
STIP1-210ENST00000540887 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
STIP1-210ENST00000540887 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
STIP1-210ENST00000540887 NHSQ6T4R5 1651 aa20.73■□□□□ 0.91
STIP1-210ENST00000540887 EP400Q96L91 3159 aa20.73■□□□□ 0.91
STIP1-210ENST00000540887 APBA3O96018 575 aa20.72■□□□□ 0.91
STIP1-210ENST00000540887 ACSBG1Q96GR2 724 aa20.72■□□□□ 0.91
STIP1-210ENST00000540887 HSP90AB1P08238 724 aaKnown RBP20.71■□□□□ 0.91
STIP1-210ENST00000540887 PHKG2P15735 406 aa20.71■□□□□ 0.91
STIP1-210ENST00000540887 FCHSD2O94868 740 aa20.7■□□□□ 0.9
STIP1-210ENST00000540887 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
STIP1-210ENST00000540887 C1orf141Q5JVX7 400 aa20.7■□□□□ 0.9
STIP1-210ENST00000540887 ZNF530Q6P9A1 599 aaPredicted RBP20.7■□□□□ 0.9
STIP1-210ENST00000540887 DOT1LQ8TEK3 1739 aa20.7■□□□□ 0.9
STIP1-210ENST00000540887 DEFB132Q7Z7B7 95 aa20.69■□□□□ 0.9
STIP1-210ENST00000540887 SYTL4Q96C24 671 aaPredicted RBP20.69■□□□□ 0.9
STIP1-210ENST00000540887 KCNQ2O43526 872 aa20.68■□□□□ 0.9
STIP1-210ENST00000540887 RSPH6AQ9H0K4 717 aa20.68■□□□□ 0.9
STIP1-210ENST00000540887 NEFMP07197 916 aa20.67■□□□□ 0.9
STIP1-210ENST00000540887 PRKAR2BP31323 418 aa20.67■□□□□ 0.9
STIP1-210ENST00000540887 PRIM1P49642 420 aaKnown RBP20.67■□□□□ 0.9
STIP1-210ENST00000540887 EN1Q05925 392 aaPredicted RBP20.67■□□□□ 0.9
STIP1-210ENST00000540887 PNNQ9H307 717 aaKnown RBP20.67■□□□□ 0.9
STIP1-210ENST00000540887 PLSCR1O15162 318 aa20.66■□□□□ 0.9
STIP1-210ENST00000540887 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
STIP1-210ENST00000540887 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
STIP1-210ENST00000540887 PTF1AQ7RTS3 328 aa20.65■□□□□ 0.9
STIP1-210ENST00000540887 GAS2L2Q8NHY3 880 aa20.65■□□□□ 0.9
STIP1-210ENST00000540887 BTAF1O14981 1849 aa20.64■□□□□ 0.9
STIP1-210ENST00000540887 RGPD3A6NKT7 1758 aaPredicted RBP20.64■□□□□ 0.9
STIP1-210ENST00000540887 RGPD4Q7Z3J3 1758 aa20.64■□□□□ 0.9
STIP1-210ENST00000540887 MTHFSDQ2M296 383 aaKnown RBP20.64■□□□□ 0.89
STIP1-210ENST00000540887 WDR43Q15061 677 aaKnown RBP eCLIP20.63■□□□□ 0.89
STIP1-210ENST00000540887 CAMKK2Q96RR4 588 aa20.63■□□□□ 0.89
STIP1-210ENST00000540887 ERVV-2B6SEH9 535 aa20.62■□□□□ 0.89
STIP1-210ENST00000540887 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
STIP1-210ENST00000540887 ITGB4P16144 1822 aa20.62■□□□□ 0.89
STIP1-210ENST00000540887 TOGARAM1Q9Y4F4 1720 aa20.61■□□□□ 0.89
STIP1-210ENST00000540887 MPRIPQ6WCQ1 1025 aa20.61■□□□□ 0.89
STIP1-210ENST00000540887 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
STIP1-210ENST00000540887 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
STIP1-210ENST00000540887 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
STIP1-210ENST00000540887 GNAT3A8MTJ3 354 aa20.58■□□□□ 0.89
STIP1-210ENST00000540887 CABP4P57796 275 aa20.58■□□□□ 0.89
STIP1-210ENST00000540887 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.89
STIP1-210ENST00000540887 KDM6AO15550 1401 aaPredicted RBP20.58■□□□□ 0.88
STIP1-210ENST00000540887 RREB1Q92766 1687 aa20.58■□□□□ 0.88
STIP1-210ENST00000540887 SMARCC1Q92922 1105 aaPredicted RBP20.57■□□□□ 0.88
STIP1-210ENST00000540887 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
STIP1-210ENST00000540887 TXNRD1Q16881 649 aa20.56■□□□□ 0.88
STIP1-210ENST00000540887 PIGBQ92521 554 aa20.56■□□□□ 0.88
STIP1-210ENST00000540887 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
STIP1-210ENST00000540887 RNMTO43148 476 aaKnown RBP20.55■□□□□ 0.88
STIP1-210ENST00000540887 PLEKHF1Q96S99 279 aa20.55■□□□□ 0.88
STIP1-210ENST00000540887 HMGB2P26583 209 aaKnown RBP20.54■□□□□ 0.88
STIP1-210ENST00000540887 NBPF14Q5TI25 921 aa20.54■□□□□ 0.88
STIP1-210ENST00000540887 MRS2Q9HD23 443 aa20.54■□□□□ 0.88
STIP1-210ENST00000540887 SLC27A3Q5K4L6 730 aa20.53■□□□□ 0.88
STIP1-210ENST00000540887 RTF1Q92541 710 aaKnown RBP20.53■□□□□ 0.88
STIP1-210ENST00000540887 ADAMTS8Q9UP79 889 aa20.53■□□□□ 0.88
STIP1-210ENST00000540887 LY75O60449 1722 aa20.53■□□□□ 0.88
STIP1-210ENST00000540887 NUP188Q5SRE5 1749 aa20.53■□□□□ 0.88
STIP1-210ENST00000540887 ADAMTS7Q9UKP4 1686 aa20.52■□□□□ 0.88
STIP1-210ENST00000540887 PALLDQ8WX93 1383 aa20.52■□□□□ 0.88
STIP1-210ENST00000540887 HTATSF1O43719 755 aaKnown RBP20.52■□□□□ 0.88
STIP1-210ENST00000540887 PROM2Q8N271 834 aa20.52■□□□□ 0.88
STIP1-210ENST00000540887 NFATC2IPQ8NCF5 419 aa20.52■□□□□ 0.88
STIP1-210ENST00000540887 LGR6Q9HBX8 967 aa20.52■□□□□ 0.88
STIP1-210ENST00000540887 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
STIP1-210ENST00000540887 SLC52A2Q9HAB3 445 aa20.51■□□□□ 0.87
STIP1-210ENST00000540887 TEFQ10587 303 aa20.5■□□□□ 0.87
STIP1-210ENST00000540887 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
STIP1-210ENST00000540887 CCDC184Q52MB2 194 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms