RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 USHBP1Q8N6Y0 703 aa22.72■■□□□ 1.23
TRIM65-203ENST00000540812 SYTL4Q96C24 671 aaPredicted RBP22.72■■□□□ 1.23
TRIM65-203ENST00000540812 NSD2O96028 1365 aa22.72■■□□□ 1.23
TRIM65-203ENST00000540812 SHANK3Q9BYB0 1731 aa22.71■■□□□ 1.23
TRIM65-203ENST00000540812 AKT1S1Q96B36 256 aa22.71■■□□□ 1.23
TRIM65-203ENST00000540812 SYT17Q9BSW7 474 aa22.71■■□□□ 1.23
TRIM65-203ENST00000540812 KCNQ4P56696 695 aa22.7■■□□□ 1.22
TRIM65-203ENST00000540812 SLC27A3Q5K4L6 730 aa22.7■■□□□ 1.22
TRIM65-203ENST00000540812 DOT1LQ8TEK3 1739 aa22.69■■□□□ 1.22
TRIM65-203ENST00000540812 HSP90AB2PQ58FF8 381 aa22.68■■□□□ 1.22
TRIM65-203ENST00000540812 ARXQ96QS3 562 aa22.67■■□□□ 1.22
TRIM65-203ENST00000540812 CARD14Q9BXL6 1004 aa22.67■■□□□ 1.22
TRIM65-203ENST00000540812 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
TRIM65-203ENST00000540812 KIF20BQ96Q89 1820 aa22.66■■□□□ 1.22
TRIM65-203ENST00000540812 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
TRIM65-203ENST00000540812 INSRP06213 1382 aa22.65■■□□□ 1.22
TRIM65-203ENST00000540812 PNPLA7Q6ZV29 1317 aa22.64■■□□□ 1.22
TRIM65-203ENST00000540812 RAPGEF4Q8WZA2 1011 aa22.64■■□□□ 1.21
TRIM65-203ENST00000540812 NSD3Q9BZ95 1437 aa22.64■■□□□ 1.21
TRIM65-203ENST00000540812 FLT4P35916 1363 aa22.63■■□□□ 1.21
TRIM65-203ENST00000540812 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
TRIM65-203ENST00000540812 LY75O60449 1722 aa22.62■■□□□ 1.21
TRIM65-203ENST00000540812 TATP17735 454 aaPredicted RBP22.62■■□□□ 1.21
TRIM65-203ENST00000540812 TFCP2L1Q9NZI6 479 aa22.62■■□□□ 1.21
TRIM65-203ENST00000540812 EMILIN1Q9Y6C2 1016 aa22.62■■□□□ 1.21
TRIM65-203ENST00000540812 QSER1Q2KHR3 1735 aa22.61■■□□□ 1.21
TRIM65-203ENST00000540812 CCNL1Q9UK58 526 aaPredicted RBP22.61■■□□□ 1.21
TRIM65-203ENST00000540812 TUBGCP6Q96RT7 1819 aa22.61■■□□□ 1.21
TRIM65-203ENST00000540812 SLC16A10Q8TF71 515 aa22.6■■□□□ 1.21
TRIM65-203ENST00000540812 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
TRIM65-203ENST00000540812 MAP3K5Q99683 1374 aa22.6■■□□□ 1.21
TRIM65-203ENST00000540812 GOLGB1Q14789 3259 aaKnown RBP22.59■■□□□ 1.21
TRIM65-203ENST00000540812 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
TRIM65-203ENST00000540812 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
TRIM65-203ENST00000540812 CYP27B1O15528 508 aa22.56■■□□□ 1.2
TRIM65-203ENST00000540812 POLD1P28340 1107 aa22.56■■□□□ 1.2
TRIM65-203ENST00000540812 TIMELESSQ9UNS1 1208 aa22.56■■□□□ 1.2
TRIM65-203ENST00000540812 COL24A1Q17RW2 1714 aa22.55■■□□□ 1.2
TRIM65-203ENST00000540812 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
TRIM65-203ENST00000540812 KLHL34Q8N239 644 aa22.55■■□□□ 1.2
TRIM65-203ENST00000540812 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
TRIM65-203ENST00000540812 MPRIPQ6WCQ1 1025 aa22.53■■□□□ 1.2
TRIM65-203ENST00000540812 COL23A1Q86Y22 540 aaPredicted RBP22.53■■□□□ 1.2
TRIM65-203ENST00000540812 NCAPD2Q15021 1401 aa22.52■■□□□ 1.2
TRIM65-203ENST00000540812 ZNF784Q8NCA9 323 aaPredicted RBP22.52■■□□□ 1.2
TRIM65-203ENST00000540812 POLR3GLQ9BT43 218 aa22.52■■□□□ 1.2
TRIM65-203ENST00000540812 MSH5O43196 834 aa22.51■■□□□ 1.19
TRIM65-203ENST00000540812 TOGARAM1Q9Y4F4 1720 aa22.51■■□□□ 1.19
TRIM65-203ENST00000540812 PALLDQ8WX93 1383 aa22.5■■□□□ 1.19
TRIM65-203ENST00000540812 NLGN2Q8NFZ4 835 aa22.5■■□□□ 1.19
TRIM65-203ENST00000540812 ANKRD26Q9UPS8 1709 aa22.5■■□□□ 1.19
TRIM65-203ENST00000540812 WASHC2AQ641Q2 1341 aa22.5■■□□□ 1.19
TRIM65-203ENST00000540812 CLSPNQ9HAW4 1339 aa22.5■■□□□ 1.19
TRIM65-203ENST00000540812 PKD1L3Q7Z443 1732 aa22.49■■□□□ 1.19
TRIM65-203ENST00000540812 GPR162Q16538 588 aa22.49■■□□□ 1.19
TRIM65-203ENST00000540812 EYA1Q99502 592 aa22.49■■□□□ 1.19
TRIM65-203ENST00000540812 MSL1Q68DK7 614 aa22.48■■□□□ 1.19
TRIM65-203ENST00000540812 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
TRIM65-203ENST00000540812 C5P01031 1676 aa22.48■■□□□ 1.19
TRIM65-203ENST00000540812 MAP2P11137 1827 aaKnown RBP22.46■■□□□ 1.19
TRIM65-203ENST00000540812 NKX1-1Q15270 411 aaPredicted RBP22.46■■□□□ 1.19
TRIM65-203ENST00000540812 PIGBQ92521 554 aa22.46■■□□□ 1.19
TRIM65-203ENST00000540812 CHD4Q14839 1912 aa22.46■■□□□ 1.19
TRIM65-203ENST00000540812 ITGB4P16144 1822 aa22.45■■□□□ 1.19
TRIM65-203ENST00000540812 TNNT2P45379 298 aaPredicted RBP22.45■■□□□ 1.18
TRIM65-203ENST00000540812 PELP1Q8IZL8 1130 aaKnown RBP22.45■■□□□ 1.18
TRIM65-203ENST00000540812 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
TRIM65-203ENST00000540812 AMIGO3Q86WK7 504 aa22.44■■□□□ 1.18
TRIM65-203ENST00000540812 SMARCC1Q92922 1105 aaPredicted RBP22.44■■□□□ 1.18
TRIM65-203ENST00000540812 TAF1LQ8IZX4 1826 aa22.43■■□□□ 1.18
TRIM65-203ENST00000540812 EIF4A2Q14240 407 aaKnown RBP22.42■■□□□ 1.18
TRIM65-203ENST00000540812 C4BP0C0L5 1744 aa22.41■■□□□ 1.18
TRIM65-203ENST00000540812 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
TRIM65-203ENST00000540812 SMIM5Q71RC9 77 aa22.41■■□□□ 1.18
TRIM65-203ENST00000540812 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.41■■□□□ 1.18
TRIM65-203ENST00000540812 PHKG2P15735 406 aa22.4■■□□□ 1.18
TRIM65-203ENST00000540812 PANK3Q9H999 370 aa22.4■■□□□ 1.18
TRIM65-203ENST00000540812 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.17
TRIM65-203ENST00000540812 FLAD1Q8NFF5 587 aa22.39■■□□□ 1.17
TRIM65-203ENST00000540812 AK7Q96M32 723 aa22.39■■□□□ 1.17
TRIM65-203ENST00000540812 LOC102724428A0A0B4J2F2 783 aa22.38■■□□□ 1.17
TRIM65-203ENST00000540812 YBX3P16989 372 aaKnown RBP eCLIP22.38■■□□□ 1.17
TRIM65-203ENST00000540812 SIK1P57059 783 aa22.38■■□□□ 1.17
TRIM65-203ENST00000540812 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
TRIM65-203ENST00000540812 LINC00116Q8NCU8 138 aa22.38■■□□□ 1.17
TRIM65-203ENST00000540812 TMOD3Q9NYL9 352 aa22.38■■□□□ 1.17
TRIM65-203ENST00000540812 HMGB2P26583 209 aaKnown RBP22.37■■□□□ 1.17
TRIM65-203ENST00000540812 ASAP1Q9ULH1 1129 aa22.37■■□□□ 1.17
TRIM65-203ENST00000540812 PHF14O94880 888 aa22.36■■□□□ 1.17
TRIM65-203ENST00000540812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.35■■□□□ 1.17
TRIM65-203ENST00000540812 UBR3Q6ZT12 1888 aa22.34■■□□□ 1.17
TRIM65-203ENST00000540812 IGSF1Q8N6C5 1336 aa22.34■■□□□ 1.17
TRIM65-203ENST00000540812 ITPK1Q13572 414 aa22.34■■□□□ 1.17
TRIM65-203ENST00000540812 ATG3Q9NT62 314 aa22.34■■□□□ 1.17
TRIM65-203ENST00000540812 CD2APQ9Y5K6 639 aa22.33■■□□□ 1.17
TRIM65-203ENST00000540812 GRIN3BO60391 1043 aa22.31■■□□□ 1.16
TRIM65-203ENST00000540812 SSFA2P28290 1259 aa22.31■■□□□ 1.16
TRIM65-203ENST00000540812 ATP6V1AP38606 617 aa22.31■■□□□ 1.16
TRIM65-203ENST00000540812 PLEKHG2Q9H7P9 1386 aa22.29■■□□□ 1.16
TRIM65-203ENST00000540812 GNPATO15228 680 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms