RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CPDO75976 1380 aa18.68■□□□□ 0.58
CYB561A3-216ENST00000540755 SPATA31A1Q5TZJ5 1347 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 CAMTA1Q9Y6Y1 1673 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 SLFN5Q08AF3 891 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 NEUROD2Q15784 382 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 SULT6B1Q6IMI4 303 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 WDR63Q8IWG1 891 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 RGPD5Q99666 1765 aa18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 TNS1Q9HBL0 1735 aaKnown RBP18.67■□□□□ 0.58
CYB561A3-216ENST00000540755 E9PSI1 815 aa18.66■□□□□ 0.58
CYB561A3-216ENST00000540755 ZC3H6P61129 1189 aaKnown RBP18.66■□□□□ 0.58
CYB561A3-216ENST00000540755 TRMT2AQ8IZ69 625 aaKnown RBP18.66■□□□□ 0.58
CYB561A3-216ENST00000540755 EYA1Q99502 592 aa18.66■□□□□ 0.58
CYB561A3-216ENST00000540755 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
CYB561A3-216ENST00000540755 RGPD2P0DJD1 1756 aa18.65■□□□□ 0.58
CYB561A3-216ENST00000540755 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
CYB561A3-216ENST00000540755 DUSP27Q5VZP5 1158 aa18.65■□□□□ 0.58
CYB561A3-216ENST00000540755 PHACTR3Q96KR7 559 aa18.65■□□□□ 0.58
CYB561A3-216ENST00000540755 RIPK4P57078 832 aa18.64■□□□□ 0.57
CYB561A3-216ENST00000540755 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
CYB561A3-216ENST00000540755 TRIM35Q9UPQ4 493 aa18.64■□□□□ 0.57
CYB561A3-216ENST00000540755 SUPT16HQ9Y5B9 1047 aaKnown RBP18.64■□□□□ 0.57
CYB561A3-216ENST00000540755 SF3B2Q13435 895 aaKnown RBP18.63■□□□□ 0.57
CYB561A3-216ENST00000540755 STRN4Q9NRL3 753 aa18.63■□□□□ 0.57
CYB561A3-216ENST00000540755 FAM208AQ9UK61 1670 aaKnown RBP18.63■□□□□ 0.57
CYB561A3-216ENST00000540755 ZBTB7CA1YPR0 619 aa18.62■□□□□ 0.57
CYB561A3-216ENST00000540755 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
CYB561A3-216ENST00000540755 NCAPD2Q15021 1401 aa18.62■□□□□ 0.57
CYB561A3-216ENST00000540755 LTV1Q96GA3 475 aaPredicted RBP18.61■□□□□ 0.57
CYB561A3-216ENST00000540755 SPINK5Q9NQ38 1064 aaPredicted RBP18.61■□□□□ 0.57
CYB561A3-216ENST00000540755 COL5A2P05997 1499 aaPredicted RBP18.61■□□□□ 0.57
CYB561A3-216ENST00000540755 IL16Q14005 1332 aa18.6■□□□□ 0.57
CYB561A3-216ENST00000540755 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
CYB561A3-216ENST00000540755 RNF123Q5XPI4 1314 aa18.59■□□□□ 0.57
CYB561A3-216ENST00000540755 NEFLP07196 543 aa18.58■□□□□ 0.57
CYB561A3-216ENST00000540755 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.57
CYB561A3-216ENST00000540755 AXIN2Q9Y2T1 843 aa18.58■□□□□ 0.57
CYB561A3-216ENST00000540755 LRP5O75197 1615 aa18.58■□□□□ 0.56
CYB561A3-216ENST00000540755 BAG6P46379 1132 aa18.58■□□□□ 0.56
CYB561A3-216ENST00000540755 ANKRD24Q8TF21 1146 aa18.58■□□□□ 0.56
CYB561A3-216ENST00000540755 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.56
CYB561A3-216ENST00000540755 ERBB3P21860 1342 aa18.57■□□□□ 0.56
CYB561A3-216ENST00000540755 NBPF6Q5VWK0 638 aa18.57■□□□□ 0.56
CYB561A3-216ENST00000540755 BARGINQ6ZT62 677 aa18.57■□□□□ 0.56
CYB561A3-216ENST00000540755 NBPF4Q96M43 638 aa18.57■□□□□ 0.56
CYB561A3-216ENST00000540755 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
CYB561A3-216ENST00000540755 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
CYB561A3-216ENST00000540755 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
CYB561A3-216ENST00000540755 CALD1Q05682 793 aaKnown RBP18.55■□□□□ 0.56
CYB561A3-216ENST00000540755 GAS2L2Q8NHY3 880 aa18.55■□□□□ 0.56
CYB561A3-216ENST00000540755 EN1Q05925 392 aaPredicted RBP18.54■□□□□ 0.56
CYB561A3-216ENST00000540755 EVA1CP58658 441 aa18.53■□□□□ 0.56
CYB561A3-216ENST00000540755 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
CYB561A3-216ENST00000540755 MTHFSDQ2M296 383 aaKnown RBP18.52■□□□□ 0.56
CYB561A3-216ENST00000540755 USHBP1Q8N6Y0 703 aa18.52■□□□□ 0.56
CYB561A3-216ENST00000540755 CRB1P82279 1406 aa18.52■□□□□ 0.56
CYB561A3-216ENST00000540755 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.56
CYB561A3-216ENST00000540755 PSDA5PKW4 1024 aaPredicted RBP18.52■□□□□ 0.55
CYB561A3-216ENST00000540755 FKBP8Q14318 412 aa18.52■□□□□ 0.55
CYB561A3-216ENST00000540755 FAM196AQ6ZSG2 479 aa18.52■□□□□ 0.55
CYB561A3-216ENST00000540755 RREB1Q92766 1687 aa18.51■□□□□ 0.55
CYB561A3-216ENST00000540755 FANCIQ9NVI1 1328 aa18.51■□□□□ 0.55
CYB561A3-216ENST00000540755 TRIM37O94972 964 aa18.51■□□□□ 0.55
CYB561A3-216ENST00000540755 PLEKHG2Q9H7P9 1386 aa18.5■□□□□ 0.55
CYB561A3-216ENST00000540755 HTATSF1O43719 755 aaKnown RBP18.5■□□□□ 0.55
CYB561A3-216ENST00000540755 RRP1P56182 461 aaKnown RBP18.49■□□□□ 0.55
CYB561A3-216ENST00000540755 IFT57Q9NWB7 429 aa18.49■□□□□ 0.55
CYB561A3-216ENST00000540755 THRAP3Q9Y2W1 955 aaKnown RBP18.49■□□□□ 0.55
CYB561A3-216ENST00000540755 GNAI1P63096 354 aa18.48■□□□□ 0.55
CYB561A3-216ENST00000540755 ERICH6BQ5W0A0 696 aa18.48■□□□□ 0.55
CYB561A3-216ENST00000540755 CAMKK2Q96RR4 588 aa18.48■□□□□ 0.55
CYB561A3-216ENST00000540755 NUP188Q5SRE5 1749 aa18.48■□□□□ 0.55
CYB561A3-216ENST00000540755 CT47B1P0C2W7 299 aaPredicted RBP18.47■□□□□ 0.55
CYB561A3-216ENST00000540755 ZNF853P0CG23 659 aa18.47■□□□□ 0.55
CYB561A3-216ENST00000540755 EZH2Q15910 746 aaKnown RBP18.47■□□□□ 0.55
CYB561A3-216ENST00000540755 THUMPD2Q9BTF0 503 aaKnown RBP18.47■□□□□ 0.55
CYB561A3-216ENST00000540755 MAP3K5Q99683 1374 aa18.47■□□□□ 0.55
CYB561A3-216ENST00000540755 VIRMAQ69YN4 1812 aaKnown RBP18.47■□□□□ 0.55
CYB561A3-216ENST00000540755 CSB-PGBD3P0DP91 1061 aa18.46■□□□□ 0.55
CYB561A3-216ENST00000540755 AMOTQ4VCS5 1084 aa18.46■□□□□ 0.55
CYB561A3-216ENST00000540755 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
CYB561A3-216ENST00000540755 WDR17Q8IZU2 1322 aa18.46■□□□□ 0.55
CYB561A3-216ENST00000540755 RTF1Q92541 710 aaKnown RBP18.46■□□□□ 0.54
CYB561A3-216ENST00000540755 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.54
CYB561A3-216ENST00000540755 NLRP2Q9NX02 1062 aa18.46■□□□□ 0.54
CYB561A3-216ENST00000540755 GNAT3A8MTJ3 354 aa18.45■□□□□ 0.54
CYB561A3-216ENST00000540755 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
CYB561A3-216ENST00000540755 PLEKHO1Q53GL0 409 aaPredicted RBP18.45■□□□□ 0.54
CYB561A3-216ENST00000540755 PKD1L3Q7Z443 1732 aa18.44■□□□□ 0.54
CYB561A3-216ENST00000540755 R3HDM1Q15032 1099 aaKnown RBP18.44■□□□□ 0.54
CYB561A3-216ENST00000540755 MCM10Q7L590 875 aa18.44■□□□□ 0.54
CYB561A3-216ENST00000540755 SBF2Q86WG5 1849 aa18.43■□□□□ 0.54
CYB561A3-216ENST00000540755 OVOS2A0A0G2JMS6 1433 aa18.43■□□□□ 0.54
CYB561A3-216ENST00000540755 APBA3O96018 575 aa18.43■□□□□ 0.54
CYB561A3-216ENST00000540755 IRX6P78412 446 aaPredicted RBP18.42■□□□□ 0.54
CYB561A3-216ENST00000540755 EXOSC9Q06265 439 aaKnown RBP18.42■□□□□ 0.54
CYB561A3-216ENST00000540755 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
CYB561A3-216ENST00000540755 AKAP4Q5JQC9 854 aa18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms