RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 DLG5Q8TDM6 1919 aa13.81□□□□□ -0.2
CPT1A-206ENST00000540367 INTS3Q68E01 1043 aaKnown RBP13.81□□□□□ -0.2
CPT1A-206ENST00000540367 NCLP19338 710 aaKnown RBP13.81□□□□□ -0.2
CPT1A-206ENST00000540367 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
CPT1A-206ENST00000540367 SLC52A1Q9NWF4 448 aa13.81□□□□□ -0.2
CPT1A-206ENST00000540367 PREX1Q8TCU6 1659 aa13.8□□□□□ -0.2
CPT1A-206ENST00000540367 RBSNQ9H1K0 784 aa13.8□□□□□ -0.2
CPT1A-206ENST00000540367 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
CPT1A-206ENST00000540367 TMEM131LA2VDJ0 1609 aa13.8□□□□□ -0.2
CPT1A-206ENST00000540367 PKP1Q13835 747 aa13.8□□□□□ -0.2
CPT1A-206ENST00000540367 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
CPT1A-206ENST00000540367 ATP7BP35670 1465 aa13.79□□□□□ -0.2
CPT1A-206ENST00000540367 ST18O60284 1047 aa13.79□□□□□ -0.2
CPT1A-206ENST00000540367 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
CPT1A-206ENST00000540367 C8orf58Q8NAV2 365 aa13.79□□□□□ -0.2
CPT1A-206ENST00000540367 EMILIN1Q9Y6C2 1016 aa13.79□□□□□ -0.2
CPT1A-206ENST00000540367 CDK12Q9NYV4 1490 aaPredicted RBP13.78□□□□□ -0.2
CPT1A-206ENST00000540367 RIMS2Q9UQ26 1411 aa13.78□□□□□ -0.2
CPT1A-206ENST00000540367 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
CPT1A-206ENST00000540367 LMOD3Q0VAK6 560 aa13.78□□□□□ -0.2
CPT1A-206ENST00000540367 PRIM1P49642 420 aaKnown RBP13.78□□□□□ -0.2
CPT1A-206ENST00000540367 CASC1Q6TDU7 716 aa13.78□□□□□ -0.2
CPT1A-206ENST00000540367 ANKRD44Q8N8A2 993 aa13.78□□□□□ -0.2
CPT1A-206ENST00000540367 PODXL2Q9NZ53 605 aa13.78□□□□□ -0.2
CPT1A-206ENST00000540367 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
CPT1A-206ENST00000540367 GPT2Q8TD30 523 aa13.77□□□□□ -0.21
CPT1A-206ENST00000540367 FAM83GA6ND36 823 aa13.76□□□□□ -0.21
CPT1A-206ENST00000540367 PRPF40AO75400 957 aaKnown RBP13.76□□□□□ -0.21
CPT1A-206ENST00000540367 SDSP20132 328 aa13.76□□□□□ -0.21
CPT1A-206ENST00000540367 IL13P35225 146 aa13.76□□□□□ -0.21
CPT1A-206ENST00000540367 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
CPT1A-206ENST00000540367 ZGPATQ8N5A5 531 aaKnown RBP13.76□□□□□ -0.21
CPT1A-206ENST00000540367 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.76□□□□□ -0.21
CPT1A-206ENST00000540367 CPSF1Q10570 1443 aaKnown RBP13.76□□□□□ -0.21
CPT1A-206ENST00000540367 ALKQ9UM73 1620 aa13.76□□□□□ -0.21
CPT1A-206ENST00000540367 ZDHHC9Q9Y397 364 aa13.76□□□□□ -0.21
CPT1A-206ENST00000540367 LRSAM1Q6UWE0 723 aa13.75□□□□□ -0.21
CPT1A-206ENST00000540367 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
CPT1A-206ENST00000540367 OTUD7AQ8TE49 926 aaPredicted RBP13.75□□□□□ -0.21
CPT1A-206ENST00000540367 RGS12O14924 1447 aa13.75□□□□□ -0.21
CPT1A-206ENST00000540367 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
CPT1A-206ENST00000540367 REC8O95072 547 aa13.75□□□□□ -0.21
CPT1A-206ENST00000540367 RRS1Q15050 365 aaKnown RBP13.75□□□□□ -0.21
CPT1A-206ENST00000540367 NME9Q86XW9 330 aa13.75□□□□□ -0.21
CPT1A-206ENST00000540367 RBM27Q9P2N5 1060 aaKnown RBP13.75□□□□□ -0.21
CPT1A-206ENST00000540367 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
CPT1A-206ENST00000540367 MCM5P33992 734 aa13.74□□□□□ -0.21
CPT1A-206ENST00000540367 R3HCC1Q9Y3T6 440 aaKnown RBP13.74□□□□□ -0.21
CPT1A-206ENST00000540367 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
CPT1A-206ENST00000540367 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
CPT1A-206ENST00000540367 TMEM63CQ9P1W3 806 aa13.73□□□□□ -0.21
CPT1A-206ENST00000540367 SOX12O15370 315 aa13.73□□□□□ -0.21
CPT1A-206ENST00000540367 TXNDC2Q86VQ3 553 aa13.73□□□□□ -0.21
CPT1A-206ENST00000540367 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
CPT1A-206ENST00000540367 RTL1A6NKG5 1358 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 AATKQ6ZMQ8 1374 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 XPCQ01831 940 aaPredicted RBP13.72□□□□□ -0.21
CPT1A-206ENST00000540367 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 EDC4Q6P2E9 1401 aaKnown RBP13.72□□□□□ -0.21
CPT1A-206ENST00000540367 MSH6P52701 1360 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 ERC2O15083 957 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 MBD3O95983 291 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 CCDC39Q9UFE4 941 aa13.72□□□□□ -0.21
CPT1A-206ENST00000540367 SYCE3A1L190 88 aa13.71□□□□□ -0.21
CPT1A-206ENST00000540367 A2ML1A8K2U0 1454 aa13.71□□□□□ -0.21
CPT1A-206ENST00000540367 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
CPT1A-206ENST00000540367 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
CPT1A-206ENST00000540367 RBM10P98175 930 aaKnown RBP13.71□□□□□ -0.21
CPT1A-206ENST00000540367 METP08581 1390 aa13.7□□□□□ -0.22
CPT1A-206ENST00000540367 UQCRHLA0A096LP55 91 aa13.7□□□□□ -0.22
CPT1A-206ENST00000540367 UQCRHP07919 91 aa13.7□□□□□ -0.22
CPT1A-206ENST00000540367 NSFL1CQ9UNZ2 370 aaKnown RBP13.7□□□□□ -0.22
CPT1A-206ENST00000540367 ESF1Q9H501 851 aaKnown RBP13.69□□□□□ -0.22
CPT1A-206ENST00000540367 PTPRCP08575 1304 aa13.69□□□□□ -0.22
CPT1A-206ENST00000540367 APBB1O00213 710 aa13.69□□□□□ -0.22
CPT1A-206ENST00000540367 CHAMP1Q96JM3 812 aa13.69□□□□□ -0.22
CPT1A-206ENST00000540367 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
CPT1A-206ENST00000540367 NRKQ7Z2Y5 1582 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 BRD1O95696 1058 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 MCM2P49736 904 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 TUBGCP6Q96RT7 1819 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 DYNC1I1O14576 645 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 MEIS3Q99687 375 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 KIAA0232Q92628 1395 aa13.68□□□□□ -0.22
CPT1A-206ENST00000540367 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
CPT1A-206ENST00000540367 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
CPT1A-206ENST00000540367 NEK4P51957 841 aa13.67□□□□□ -0.22
CPT1A-206ENST00000540367 CUL4AQ13619 759 aa13.67□□□□□ -0.22
CPT1A-206ENST00000540367 SASS6Q6UVJ0 657 aa13.67□□□□□ -0.22
CPT1A-206ENST00000540367 SETD1AO15047 1707 aaKnown RBP13.67□□□□□ -0.22
CPT1A-206ENST00000540367 HMMRO75330 724 aa13.66□□□□□ -0.22
CPT1A-206ENST00000540367 MTERF4Q7Z6M4 381 aaKnown RBP13.66□□□□□ -0.22
CPT1A-206ENST00000540367 PDE1AP54750 535 aa13.66□□□□□ -0.22
CPT1A-206ENST00000540367 TSPY26PQ9H489 355 aa13.66□□□□□ -0.22
CPT1A-206ENST00000540367 CHL1O00533 1208 aa13.65□□□□□ -0.22
CPT1A-206ENST00000540367 FOXD4L5Q5VV16 416 aaPredicted RBP13.65□□□□□ -0.22
CPT1A-206ENST00000540367 FOXD4L4Q8WXT5 416 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms