RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 PROM2Q8N271 834 aa26.7■■□□□ 1.86
RAP1B-221ENST00000540209 NCAPD2Q15021 1401 aa26.69■■□□□ 1.86
RAP1B-221ENST00000540209 DDX54Q8TDD1 881 aaKnown RBP26.69■■□□□ 1.86
RAP1B-221ENST00000540209 NSD2O96028 1365 aa26.69■■□□□ 1.86
RAP1B-221ENST00000540209 WASHC2AQ641Q2 1341 aa26.68■■□□□ 1.86
RAP1B-221ENST00000540209 ZCRB1Q8TBF4 217 aaKnown RBP26.68■■□□□ 1.86
RAP1B-221ENST00000540209 KIF7Q2M1P5 1343 aa26.67■■□□□ 1.86
RAP1B-221ENST00000540209 POLKQ9UBT6 870 aa26.67■■□□□ 1.86
RAP1B-221ENST00000540209 PKD1L3Q7Z443 1732 aa26.66■■□□□ 1.86
RAP1B-221ENST00000540209 PPM1GO15355 546 aaPredicted RBP26.66■■□□□ 1.86
RAP1B-221ENST00000540209 TXNRD1Q16881 649 aa26.65■■□□□ 1.86
RAP1B-221ENST00000540209 RAPGEF4Q8WZA2 1011 aa26.65■■□□□ 1.86
RAP1B-221ENST00000540209 ANO8Q9HCE9 1232 aaPredicted RBP26.64■■□□□ 1.86
RAP1B-221ENST00000540209 PAPPAQ13219 1627 aa26.63■■□□□ 1.85
RAP1B-221ENST00000540209 CASZ1Q86V15 1759 aa26.63■■□□□ 1.85
RAP1B-221ENST00000540209 TATP17735 454 aaPredicted RBP26.62■■□□□ 1.85
RAP1B-221ENST00000540209 TNNT2P45379 298 aaPredicted RBP26.62■■□□□ 1.85
RAP1B-221ENST00000540209 LY75O60449 1722 aa26.59■■□□□ 1.85
RAP1B-221ENST00000540209 KNSTRNQ9Y448 316 aa26.58■■□□□ 1.85
RAP1B-221ENST00000540209 PCDH11XQ9BZA7 1347 aa26.58■■□□□ 1.85
RAP1B-221ENST00000540209 PCDH11YQ9BZA8 1340 aa26.58■■□□□ 1.85
RAP1B-221ENST00000540209 EYA1Q99502 592 aa26.57■■□□□ 1.84
RAP1B-221ENST00000540209 PRIM1P49642 420 aaKnown RBP26.56■■□□□ 1.84
RAP1B-221ENST00000540209 TOGARAM1Q9Y4F4 1720 aa26.56■■□□□ 1.84
RAP1B-221ENST00000540209 EIF4A2Q14240 407 aaKnown RBP26.55■■□□□ 1.84
RAP1B-221ENST00000540209 AMER1Q5JTC6 1135 aaPredicted RBP26.55■■□□□ 1.84
RAP1B-221ENST00000540209 MORC1Q86VD1 984 aa26.54■■□□□ 1.84
RAP1B-221ENST00000540209 SYTL4Q96C24 671 aaPredicted RBP26.54■■□□□ 1.84
RAP1B-221ENST00000540209 ITGB4P16144 1822 aa26.53■■□□□ 1.84
RAP1B-221ENST00000540209 CYP27B1O15528 508 aa26.52■■□□□ 1.84
RAP1B-221ENST00000540209 SLC15A2Q16348 729 aa26.52■■□□□ 1.84
RAP1B-221ENST00000540209 STK32BQ9NY57 414 aa26.52■■□□□ 1.84
RAP1B-221ENST00000540209 LRRC4BQ9NT99 713 aa26.51■■□□□ 1.83
RAP1B-221ENST00000540209 PER1O15534 1290 aaPredicted RBP26.5■■□□□ 1.83
RAP1B-221ENST00000540209 PLEKHG2Q9H7P9 1386 aa26.49■■□□□ 1.83
RAP1B-221ENST00000540209 IGSF1Q8N6C5 1336 aa26.49■■□□□ 1.83
RAP1B-221ENST00000540209 QSER1Q2KHR3 1735 aa26.49■■□□□ 1.83
RAP1B-221ENST00000540209 PDGFDQ9GZP0 370 aaPredicted RBP26.49■■□□□ 1.83
RAP1B-221ENST00000540209 SLC27A3Q5K4L6 730 aa26.48■■□□□ 1.83
RAP1B-221ENST00000540209 SPON1Q9HCB6 807 aa26.48■■□□□ 1.83
RAP1B-221ENST00000540209 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.48■■□□□ 1.83
RAP1B-221ENST00000540209 SPG7Q9UQ90 795 aa26.47■■□□□ 1.83
RAP1B-221ENST00000540209 TUBGCP6Q96RT7 1819 aa26.46■■□□□ 1.83
RAP1B-221ENST00000540209 NKX1-1Q15270 411 aaPredicted RBP26.45■■□□□ 1.82
RAP1B-221ENST00000540209 ZNF827Q17R98 1081 aa26.44■■□□□ 1.82
RAP1B-221ENST00000540209 AKT1S1Q96B36 256 aa26.41■■□□□ 1.82
RAP1B-221ENST00000540209 NPC1L1Q9UHC9 1359 aa26.41■■□□□ 1.82
RAP1B-221ENST00000540209 TAF1LQ8IZX4 1826 aa26.41■■□□□ 1.82
RAP1B-221ENST00000540209 C5P01031 1676 aa26.41■■□□□ 1.82
RAP1B-221ENST00000540209 KCNQ4P56696 695 aa26.4■■□□□ 1.82
RAP1B-221ENST00000540209 ZBTB7AO95365 584 aa26.39■■□□□ 1.82
RAP1B-221ENST00000540209 PHKG2P15735 406 aa26.39■■□□□ 1.82
RAP1B-221ENST00000540209 MPRIPQ6WCQ1 1025 aa26.39■■□□□ 1.82
RAP1B-221ENST00000540209 IFNL2Q8IZJ0 200 aa26.38■■□□□ 1.81
RAP1B-221ENST00000540209 CCNL1Q9UK58 526 aaPredicted RBP26.38■■□□□ 1.81
RAP1B-221ENST00000540209 YY1P25490 414 aa26.37■■□□□ 1.81
RAP1B-221ENST00000540209 IL13P35225 146 aa26.37■■□□□ 1.81
RAP1B-221ENST00000540209 CC2D1BQ5T0F9 858 aaKnown RBP26.37■■□□□ 1.81
RAP1B-221ENST00000540209 KDRP35968 1356 aa26.36■■□□□ 1.81
RAP1B-221ENST00000540209 PALLDQ8WX93 1383 aa26.36■■□□□ 1.81
RAP1B-221ENST00000540209 PTGER2P43116 358 aa26.36■■□□□ 1.81
RAP1B-221ENST00000540209 MTHFSP49914 203 aa26.35■■□□□ 1.81
RAP1B-221ENST00000540209 COL24A1Q17RW2 1714 aa26.35■■□□□ 1.81
RAP1B-221ENST00000540209 AEBP1Q8IUX7 1158 aa26.35■■□□□ 1.81
RAP1B-221ENST00000540209 MTFR1LQ9H019 292 aa26.35■■□□□ 1.81
RAP1B-221ENST00000540209 PPP1R1BQ9UD71 204 aaPredicted RBP26.35■■□□□ 1.81
RAP1B-221ENST00000540209 PIGBQ92521 554 aa26.34■■□□□ 1.81
RAP1B-221ENST00000540209 ATF5Q9Y2D1 282 aaPredicted RBP26.33■■□□□ 1.81
RAP1B-221ENST00000540209 PNPLA7Q6ZV29 1317 aa26.33■■□□□ 1.81
RAP1B-221ENST00000540209 PLEKHO1Q53GL0 409 aaPredicted RBP26.31■■□□□ 1.8
RAP1B-221ENST00000540209 SULT6B1Q6IMI4 303 aa26.31■■□□□ 1.8
RAP1B-221ENST00000540209 SMARCC1Q92922 1105 aaPredicted RBP26.31■■□□□ 1.8
RAP1B-221ENST00000540209 SGIP1Q9BQI5 828 aa26.31■■□□□ 1.8
RAP1B-221ENST00000540209 AMOTQ4VCS5 1084 aa26.3■■□□□ 1.8
RAP1B-221ENST00000540209 TFCP2L1Q9NZI6 479 aa26.3■■□□□ 1.8
RAP1B-221ENST00000540209 C4BP0C0L5 1744 aa26.3■■□□□ 1.8
RAP1B-221ENST00000540209 TMOD3Q9NYL9 352 aa26.29■■□□□ 1.8
RAP1B-221ENST00000540209 COL3A1P02461 1466 aaPredicted RBP26.29■■□□□ 1.8
RAP1B-221ENST00000540209 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
RAP1B-221ENST00000540209 ZNF530Q6P9A1 599 aaPredicted RBP26.27■■□□□ 1.8
RAP1B-221ENST00000540209 SLC16A10Q8TF71 515 aa26.27■■□□□ 1.8
RAP1B-221ENST00000540209 HSP90AB1P08238 724 aaKnown RBP26.26■■□□□ 1.79
RAP1B-221ENST00000540209 DCAF5Q96JK2 942 aa26.26■■□□□ 1.79
RAP1B-221ENST00000540209 SCN11AQ9UI33 1791 aa26.25■■□□□ 1.79
RAP1B-221ENST00000540209 ERVV-2B6SEH9 535 aa26.25■■□□□ 1.79
RAP1B-221ENST00000540209 HMGB2P26583 209 aaKnown RBP26.25■■□□□ 1.79
RAP1B-221ENST00000540209 UBR3Q6ZT12 1888 aa26.25■■□□□ 1.79
RAP1B-221ENST00000540209 VIRMAQ69YN4 1812 aaKnown RBP26.25■■□□□ 1.79
RAP1B-221ENST00000540209 ZNF831Q5JPB2 1677 aa26.25■■□□□ 1.79
RAP1B-221ENST00000540209 ASAP1Q9ULH1 1129 aa26.24■■□□□ 1.79
RAP1B-221ENST00000540209 DIAPH1O60610 1272 aaKnown RBP26.23■■□□□ 1.79
RAP1B-221ENST00000540209 CNGB1Q14028 1251 aaPredicted RBP26.23■■□□□ 1.79
RAP1B-221ENST00000540209 LOC102724428A0A0B4J2F2 783 aa26.21■■□□□ 1.79
RAP1B-221ENST00000540209 SIK1P57059 783 aa26.21■■□□□ 1.79
RAP1B-221ENST00000540209 C1orf141Q5JVX7 400 aa26.21■■□□□ 1.79
RAP1B-221ENST00000540209 ATG3Q9NT62 314 aa26.21■■□□□ 1.79
RAP1B-221ENST00000540209 HMOX1P09601 288 aa26.19■■□□□ 1.78
RAP1B-221ENST00000540209 COL23A1Q86Y22 540 aaPredicted RBP26.19■■□□□ 1.78
RAP1B-221ENST00000540209 DCAF8L1A6NGE4 600 aa26.18■■□□□ 1.78
RAP1B-221ENST00000540209 COL5A3P25940 1745 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms