RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
SEMA4D-222ENST00000540183 USHBP1Q8N6Y0 703 aa20.03■□□□□ 0.8
SEMA4D-222ENST00000540183 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
SEMA4D-222ENST00000540183 SYTL4Q96C24 671 aaPredicted RBP20.03■□□□□ 0.8
SEMA4D-222ENST00000540183 GGNBP2Q9H3C7 697 aa20.03■□□□□ 0.8
SEMA4D-222ENST00000540183 ARXQ96QS3 562 aa20.02■□□□□ 0.8
SEMA4D-222ENST00000540183 FYB1O15117 783 aa20.01■□□□□ 0.79
SEMA4D-222ENST00000540183 USP47Q96K76 1375 aa20■□□□□ 0.79
SEMA4D-222ENST00000540183 NBPF6Q5VWK0 638 aa20■□□□□ 0.79
SEMA4D-222ENST00000540183 ZCRB1Q8TBF4 217 aaKnown RBP20■□□□□ 0.79
SEMA4D-222ENST00000540183 NBPF4Q96M43 638 aa20■□□□□ 0.79
SEMA4D-222ENST00000540183 PNPLA7Q6ZV29 1317 aa20■□□□□ 0.79
SEMA4D-222ENST00000540183 ITGB4P16144 1822 aa19.99■□□□□ 0.79
SEMA4D-222ENST00000540183 RTL1A6NKG5 1358 aa19.98■□□□□ 0.79
SEMA4D-222ENST00000540183 TAF1LQ8IZX4 1826 aa19.98■□□□□ 0.79
SEMA4D-222ENST00000540183 SLC27A3Q5K4L6 730 aa19.98■□□□□ 0.79
SEMA4D-222ENST00000540183 TOGARAM1Q9Y4F4 1720 aa19.98■□□□□ 0.79
SEMA4D-222ENST00000540183 TMF1P82094 1093 aa19.97■□□□□ 0.79
SEMA4D-222ENST00000540183 C5P01031 1676 aa19.97■□□□□ 0.79
SEMA4D-222ENST00000540183 MAP2P11137 1827 aaKnown RBP19.95■□□□□ 0.78
SEMA4D-222ENST00000540183 HSP90AB2PQ58FF8 381 aa19.95■□□□□ 0.78
SEMA4D-222ENST00000540183 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
SEMA4D-222ENST00000540183 TFCP2L1Q9NZI6 479 aa19.95■□□□□ 0.78
SEMA4D-222ENST00000540183 MAP3K5Q99683 1374 aa19.95■□□□□ 0.78
SEMA4D-222ENST00000540183 GOLGB1Q14789 3259 aaKnown RBP19.94■□□□□ 0.78
SEMA4D-222ENST00000540183 ZNF784Q8NCA9 323 aaPredicted RBP19.94■□□□□ 0.78
SEMA4D-222ENST00000540183 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
SEMA4D-222ENST00000540183 PKD1L3Q7Z443 1732 aa19.93■□□□□ 0.78
SEMA4D-222ENST00000540183 SMG6Q86US8 1419 aaKnown RBP19.93■□□□□ 0.78
SEMA4D-222ENST00000540183 SLC24A1O60721 1099 aa19.92■□□□□ 0.78
SEMA4D-222ENST00000540183 CARD14Q9BXL6 1004 aa19.92■□□□□ 0.78
SEMA4D-222ENST00000540183 ANKRD26Q9UPS8 1709 aa19.92■□□□□ 0.78
SEMA4D-222ENST00000540183 SLC16A10Q8TF71 515 aa19.91■□□□□ 0.78
SEMA4D-222ENST00000540183 RAPGEF4Q8WZA2 1011 aa19.91■□□□□ 0.78
SEMA4D-222ENST00000540183 INSRP06213 1382 aa19.91■□□□□ 0.78
SEMA4D-222ENST00000540183 FLT4P35916 1363 aa19.9■□□□□ 0.78
SEMA4D-222ENST00000540183 NSD3Q9BZ95 1437 aa19.9■□□□□ 0.78
SEMA4D-222ENST00000540183 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
SEMA4D-222ENST00000540183 POLD1P28340 1107 aa19.89■□□□□ 0.77
SEMA4D-222ENST00000540183 NLGN2Q8NFZ4 835 aa19.89■□□□□ 0.77
SEMA4D-222ENST00000540183 EMILIN1Q9Y6C2 1016 aa19.89■□□□□ 0.77
SEMA4D-222ENST00000540183 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
SEMA4D-222ENST00000540183 GPR162Q16538 588 aa19.88■□□□□ 0.77
SEMA4D-222ENST00000540183 COL23A1Q86Y22 540 aaPredicted RBP19.88■□□□□ 0.77
SEMA4D-222ENST00000540183 CGNL1Q0VF96 1302 aa19.87■□□□□ 0.77
SEMA4D-222ENST00000540183 MSH5O43196 834 aa19.87■□□□□ 0.77
SEMA4D-222ENST00000540183 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
SEMA4D-222ENST00000540183 UBR3Q6ZT12 1888 aa19.86■□□□□ 0.77
SEMA4D-222ENST00000540183 CYP27B1O15528 508 aa19.86■□□□□ 0.77
SEMA4D-222ENST00000540183 MSL1Q68DK7 614 aa19.86■□□□□ 0.77
SEMA4D-222ENST00000540183 C4BP0C0L5 1744 aa19.85■□□□□ 0.77
SEMA4D-222ENST00000540183 PCDH11XQ9BZA7 1347 aa19.85■□□□□ 0.77
SEMA4D-222ENST00000540183 PCDH11YQ9BZA8 1340 aa19.85■□□□□ 0.77
SEMA4D-222ENST00000540183 MPRIPQ6WCQ1 1025 aa19.85■□□□□ 0.77
SEMA4D-222ENST00000540183 PALLDQ8WX93 1383 aa19.83■□□□□ 0.77
SEMA4D-222ENST00000540183 PPM1GO15355 546 aaPredicted RBP19.83■□□□□ 0.77
SEMA4D-222ENST00000540183 CDCA8Q53HL2 280 aa19.83■□□□□ 0.77
SEMA4D-222ENST00000540183 NCAPD2Q15021 1401 aa19.83■□□□□ 0.76
SEMA4D-222ENST00000540183 KIF24Q5T7B8 1368 aa19.83■□□□□ 0.76
SEMA4D-222ENST00000540183 SMIM5Q71RC9 77 aa19.82■□□□□ 0.76
SEMA4D-222ENST00000540183 AMIGO3Q86WK7 504 aa19.81■□□□□ 0.76
SEMA4D-222ENST00000540183 YBX3P16989 372 aaKnown RBP eCLIP19.8■□□□□ 0.76
SEMA4D-222ENST00000540183 PIGBQ92521 554 aa19.78■□□□□ 0.76
SEMA4D-222ENST00000540183 EYA1Q99502 592 aa19.78■□□□□ 0.76
SEMA4D-222ENST00000540183 POLR3GLQ9BT43 218 aa19.77■□□□□ 0.76
SEMA4D-222ENST00000540183 WASHC2AQ641Q2 1341 aa19.76■□□□□ 0.75
SEMA4D-222ENST00000540183 TNNT2P45379 298 aaPredicted RBP19.75■□□□□ 0.75
SEMA4D-222ENST00000540183 POLKQ9UBT6 870 aa19.75■□□□□ 0.75
SEMA4D-222ENST00000540183 PHF14O94880 888 aa19.74■□□□□ 0.75
SEMA4D-222ENST00000540183 NKX1-1Q15270 411 aaPredicted RBP19.74■□□□□ 0.75
SEMA4D-222ENST00000540183 C1QTNF8P60827 252 aa19.73■□□□□ 0.75
SEMA4D-222ENST00000540183 SMARCC1Q92922 1105 aaPredicted RBP19.73■□□□□ 0.75
SEMA4D-222ENST00000540183 AK7Q96M32 723 aa19.73■□□□□ 0.75
SEMA4D-222ENST00000540183 SPG7Q9UQ90 795 aa19.73■□□□□ 0.75
SEMA4D-222ENST00000540183 LINC00116Q8NCU8 138 aa19.72■□□□□ 0.75
SEMA4D-222ENST00000540183 PCGF6Q9BYE7 350 aa19.72■□□□□ 0.75
SEMA4D-222ENST00000540183 SENP3-EIF4A1A0A087X0R7 540 aa19.71■□□□□ 0.75
SEMA4D-222ENST00000540183 EIF4A2Q14240 407 aaKnown RBP19.71■□□□□ 0.75
SEMA4D-222ENST00000540183 ASAP1Q9ULH1 1129 aa19.71■□□□□ 0.75
SEMA4D-222ENST00000540183 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.7■□□□□ 0.74
SEMA4D-222ENST00000540183 PHKG2P15735 406 aa19.7■□□□□ 0.74
SEMA4D-222ENST00000540183 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
SEMA4D-222ENST00000540183 WWC3Q9ULE0 1092 aa19.7■□□□□ 0.74
SEMA4D-222ENST00000540183 LOC102724428A0A0B4J2F2 783 aa19.69■□□□□ 0.74
SEMA4D-222ENST00000540183 SIK1P57059 783 aa19.69■□□□□ 0.74
SEMA4D-222ENST00000540183 ITPK1Q13572 414 aa19.69■□□□□ 0.74
SEMA4D-222ENST00000540183 TMOD3Q9NYL9 352 aa19.69■□□□□ 0.74
SEMA4D-222ENST00000540183 TIMELESSQ9UNS1 1208 aa19.68■□□□□ 0.74
SEMA4D-222ENST00000540183 CD2APQ9Y5K6 639 aa19.68■□□□□ 0.74
SEMA4D-222ENST00000540183 COL5A3P25940 1745 aaPredicted RBP19.68■□□□□ 0.74
SEMA4D-222ENST00000540183 GRIN3BO60391 1043 aa19.67■□□□□ 0.74
SEMA4D-222ENST00000540183 IFNL2Q8IZJ0 200 aa19.67■□□□□ 0.74
SEMA4D-222ENST00000540183 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
SEMA4D-222ENST00000540183 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
SEMA4D-222ENST00000540183 KIAA1551Q9HCM1 1747 aa19.66■□□□□ 0.74
SEMA4D-222ENST00000540183 GIGYF1O75420 1035 aaPredicted RBP19.66■□□□□ 0.74
SEMA4D-222ENST00000540183 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.66■□□□□ 0.74
SEMA4D-222ENST00000540183 MYH14Q7Z406 1995 aaKnown RBP19.66■□□□□ 0.74
SEMA4D-222ENST00000540183 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
SEMA4D-222ENST00000540183 HSPA5P11021 654 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms