RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 ZNF530Q6P9A1 599 aaPredicted RBP13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 RAPGEF4Q8WZA2 1011 aa13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 ZNF853P0CG23 659 aa13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 GNAI1P63096 354 aa13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 PLEKHO1Q53GL0 409 aaPredicted RBP13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 CFAP44Q96MT7 982 aa13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
PABPC1P4-201ENST00000539977 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 RGPD2P0DJD1 1756 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 COL18A1P39060 1754 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 MPRIPQ6WCQ1 1025 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
PABPC1P4-201ENST00000539977 TSPYL6Q8N831 410 aa13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 NCAPD2Q15021 1401 aa13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 TATP17735 454 aaPredicted RBP13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 RARSP54136 660 aaKnown RBP13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 KRT24Q2M2I5 525 aa13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 COL5A2P05997 1499 aaPredicted RBP13.4□□□□□ -0.26
PABPC1P4-201ENST00000539977 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
PABPC1P4-201ENST00000539977 PHLPP1O60346 1717 aa13.39□□□□□ -0.27
PABPC1P4-201ENST00000539977 AMOTQ4VCS5 1084 aa13.39□□□□□ -0.27
PABPC1P4-201ENST00000539977 CRB1P82279 1406 aa13.39□□□□□ -0.27
PABPC1P4-201ENST00000539977 MEGF6O75095 1541 aa13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 CHL1O00533 1208 aa13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 C1orf141Q5JVX7 400 aa13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 C8orf58Q8NAV2 365 aa13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 FRAT1Q92837 279 aaPredicted RBP13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 TCERG1O14776 1098 aaKnown RBP13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 AKAP4Q5JQC9 854 aa13.38□□□□□ -0.27
PABPC1P4-201ENST00000539977 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
PABPC1P4-201ENST00000539977 CARD10Q9BWT7 1032 aa13.37□□□□□ -0.27
PABPC1P4-201ENST00000539977 TSPYL4Q9UJ04 414 aa13.37□□□□□ -0.27
PABPC1P4-201ENST00000539977 DLG5Q8TDM6 1919 aa13.36□□□□□ -0.27
PABPC1P4-201ENST00000539977 HSPA1LP34931 641 aa13.36□□□□□ -0.27
PABPC1P4-201ENST00000539977 EXOC6Q8TAG9 804 aa13.36□□□□□ -0.27
PABPC1P4-201ENST00000539977 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
PABPC1P4-201ENST00000539977 ABCC6O95255 1503 aa13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 LMO7Q8WWI1 1683 aa13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 CYP27B1O15528 508 aa13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 CANXP27824 592 aaKnown RBP13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 TNNQ9UQP3 1299 aa13.35□□□□□ -0.27
PABPC1P4-201ENST00000539977 RNMTO43148 476 aaKnown RBP13.34□□□□□ -0.27
PABPC1P4-201ENST00000539977 VAMP4O75379 141 aa13.34□□□□□ -0.27
PABPC1P4-201ENST00000539977 TAF7Q15545 349 aaPredicted RBP13.34□□□□□ -0.27
PABPC1P4-201ENST00000539977 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
PABPC1P4-201ENST00000539977 PHKG2P15735 406 aa13.33□□□□□ -0.27
PABPC1P4-201ENST00000539977 CRBNQ96SW2 442 aa13.33□□□□□ -0.27
PABPC1P4-201ENST00000539977 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 IL2RBP14784 551 aa13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 TEFQ10587 303 aa13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 C8orf37Q96NL8 207 aa13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 COL22A1Q8NFW1 1626 aaPredicted RBP13.33□□□□□ -0.28
PABPC1P4-201ENST00000539977 CEMIPQ8WUJ3 1361 aa13.32□□□□□ -0.28
PABPC1P4-201ENST00000539977 JCADQ9P266 1359 aa13.32□□□□□ -0.28
PABPC1P4-201ENST00000539977 KCNQ3O43525 872 aa13.32□□□□□ -0.28
PABPC1P4-201ENST00000539977 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
PABPC1P4-201ENST00000539977 ZCRB1Q8TBF4 217 aaKnown RBP13.32□□□□□ -0.28
PABPC1P4-201ENST00000539977 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
PABPC1P4-201ENST00000539977 IFNL2Q8IZJ0 200 aa13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 B4GALNT3Q6L9W6 998 aa13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 NGLY1Q96IV0 654 aa13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 OVOS2A0A0G2JMS6 1433 aa13.31□□□□□ -0.28
PABPC1P4-201ENST00000539977 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
PABPC1P4-201ENST00000539977 NECTIN2Q92692 538 aa13.3□□□□□ -0.28
PABPC1P4-201ENST00000539977 NOB1Q9ULX3 412 aaKnown RBP13.3□□□□□ -0.28
PABPC1P4-201ENST00000539977 RLBP1P12271 317 aa13.29□□□□□ -0.28
PABPC1P4-201ENST00000539977 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
PABPC1P4-201ENST00000539977 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
PABPC1P4-201ENST00000539977 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
PABPC1P4-201ENST00000539977 COL14A1Q05707 1796 aaKnown RBP13.28□□□□□ -0.28
PABPC1P4-201ENST00000539977 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
PABPC1P4-201ENST00000539977 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
PABPC1P4-201ENST00000539977 COG6Q9Y2V7 657 aa13.28□□□□□ -0.28
PABPC1P4-201ENST00000539977 ALDH1L2Q3SY69 923 aa13.27□□□□□ -0.28
PABPC1P4-201ENST00000539977 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.28
PABPC1P4-201ENST00000539977 DCAF5Q96JK2 942 aa13.27□□□□□ -0.28
PABPC1P4-201ENST00000539977 PCDH11XQ9BZA7 1347 aa13.27□□□□□ -0.29
PABPC1P4-201ENST00000539977 PCDH11YQ9BZA8 1340 aa13.27□□□□□ -0.29
PABPC1P4-201ENST00000539977 ZKSCAN2Q63HK3 967 aa13.27□□□□□ -0.29
PABPC1P4-201ENST00000539977 SLC52A2Q9HAB3 445 aa13.27□□□□□ -0.29
PABPC1P4-201ENST00000539977 TRIM27P14373 513 aa13.26□□□□□ -0.29
PABPC1P4-201ENST00000539977 EIF4A1P60842 406 aaKnown RBP13.26□□□□□ -0.29
PABPC1P4-201ENST00000539977 SPATA31A1Q5TZJ5 1347 aa13.26□□□□□ -0.29
PABPC1P4-201ENST00000539977 CABP4P57796 275 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 UNC5CLQ8IV45 518 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms