RNA–Protein interactions for RNA: ENST00000539928.1

PHC1-207, Transcript of polyhomeotic homolog 1, humanhuman

TSL 4

Gene PHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-207ENST00000539928 RTL1A6NKG5 1358 aa12.79□□□□□ -0.36
PHC1-207ENST00000539928 ZBTB7AO95365 584 aa12.78□□□□□ -0.36
PHC1-207ENST00000539928 SLC15A2Q16348 729 aa12.78□□□□□ -0.36
PHC1-207ENST00000539928 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
PHC1-207ENST00000539928 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
PHC1-207ENST00000539928 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
PHC1-207ENST00000539928 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.37
PHC1-207ENST00000539928 ZCRB1Q8TBF4 217 aaKnown RBP12.77□□□□□ -0.37
PHC1-207ENST00000539928 NSD3Q9BZ95 1437 aa12.77□□□□□ -0.37
PHC1-207ENST00000539928 MEGF6O75095 1541 aa12.77□□□□□ -0.37
PHC1-207ENST00000539928 INSRP06213 1382 aa12.75□□□□□ -0.37
PHC1-207ENST00000539928 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
PHC1-207ENST00000539928 SMG6Q86US8 1419 aaKnown RBP12.75□□□□□ -0.37
PHC1-207ENST00000539928 SYTL4Q96C24 671 aaPredicted RBP12.75□□□□□ -0.37
PHC1-207ENST00000539928 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
PHC1-207ENST00000539928 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
PHC1-207ENST00000539928 LRRC4BQ9NT99 713 aa12.75□□□□□ -0.37
PHC1-207ENST00000539928 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
PHC1-207ENST00000539928 FLT4P35916 1363 aa12.74□□□□□ -0.37
PHC1-207ENST00000539928 PTGER2P43116 358 aa12.74□□□□□ -0.37
PHC1-207ENST00000539928 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
PHC1-207ENST00000539928 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
PHC1-207ENST00000539928 RAPGEF4Q8WZA2 1011 aa12.74□□□□□ -0.37
PHC1-207ENST00000539928 EMILIN1Q9Y6C2 1016 aa12.74□□□□□ -0.37
PHC1-207ENST00000539928 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
PHC1-207ENST00000539928 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
PHC1-207ENST00000539928 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
PHC1-207ENST00000539928 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
PHC1-207ENST00000539928 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
PHC1-207ENST00000539928 PPM1GO15355 546 aaPredicted RBP12.72□□□□□ -0.37
PHC1-207ENST00000539928 TATP17735 454 aaPredicted RBP12.72□□□□□ -0.37
PHC1-207ENST00000539928 KCNQ4P56696 695 aa12.72□□□□□ -0.37
PHC1-207ENST00000539928 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
PHC1-207ENST00000539928 NSD2O96028 1365 aa12.71□□□□□ -0.37
PHC1-207ENST00000539928 HSPA5P11021 654 aaKnown RBP12.71□□□□□ -0.37
PHC1-207ENST00000539928 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.37
PHC1-207ENST00000539928 SLC27A3Q5K4L6 730 aa12.71□□□□□ -0.37
PHC1-207ENST00000539928 MAP2P11137 1827 aaKnown RBP12.71□□□□□ -0.38
PHC1-207ENST00000539928 AKT1S1Q96B36 256 aa12.7□□□□□ -0.38
PHC1-207ENST00000539928 TNNT2P45379 298 aaPredicted RBP12.69□□□□□ -0.38
PHC1-207ENST00000539928 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
PHC1-207ENST00000539928 LY75O60449 1722 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 PCDH11XQ9BZA7 1347 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 PCDH11YQ9BZA8 1340 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 CYP27B1O15528 508 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 POTEHQ6S545 545 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 POLKQ9UBT6 870 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
PHC1-207ENST00000539928 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
PHC1-207ENST00000539928 PANK3Q9H999 370 aa12.67□□□□□ -0.38
PHC1-207ENST00000539928 TFCP2L1Q9NZI6 479 aa12.67□□□□□ -0.38
PHC1-207ENST00000539928 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
PHC1-207ENST00000539928 PNPLA7Q6ZV29 1317 aa12.66□□□□□ -0.38
PHC1-207ENST00000539928 ARXQ96QS3 562 aa12.66□□□□□ -0.38
PHC1-207ENST00000539928 EYA1Q99502 592 aa12.66□□□□□ -0.38
PHC1-207ENST00000539928 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
PHC1-207ENST00000539928 TUBGCP6Q96RT7 1819 aa12.66□□□□□ -0.38
PHC1-207ENST00000539928 QSER1Q2KHR3 1735 aa12.65□□□□□ -0.38
PHC1-207ENST00000539928 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
PHC1-207ENST00000539928 YY1P25490 414 aa12.65□□□□□ -0.38
PHC1-207ENST00000539928 MPRIPQ6WCQ1 1025 aa12.65□□□□□ -0.38
PHC1-207ENST00000539928 PKD1L3Q7Z443 1732 aa12.65□□□□□ -0.38
PHC1-207ENST00000539928 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
PHC1-207ENST00000539928 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
PHC1-207ENST00000539928 ITGB4P16144 1822 aa12.64□□□□□ -0.39
PHC1-207ENST00000539928 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
PHC1-207ENST00000539928 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
PHC1-207ENST00000539928 PALLDQ8WX93 1383 aa12.62□□□□□ -0.39
PHC1-207ENST00000539928 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
PHC1-207ENST00000539928 PIGBQ92521 554 aa12.62□□□□□ -0.39
PHC1-207ENST00000539928 COL23A1Q86Y22 540 aaPredicted RBP12.61□□□□□ -0.39
PHC1-207ENST00000539928 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.39
PHC1-207ENST00000539928 C5P01031 1676 aa12.61□□□□□ -0.39
PHC1-207ENST00000539928 TAF1LQ8IZX4 1826 aa12.6□□□□□ -0.39
PHC1-207ENST00000539928 COL24A1Q17RW2 1714 aa12.6□□□□□ -0.39
PHC1-207ENST00000539928 POLD1P28340 1107 aa12.6□□□□□ -0.39
PHC1-207ENST00000539928 MORC1Q86VD1 984 aa12.6□□□□□ -0.39
PHC1-207ENST00000539928 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
PHC1-207ENST00000539928 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
PHC1-207ENST00000539928 MAP3K5Q99683 1374 aa12.59□□□□□ -0.39
PHC1-207ENST00000539928 PHKG2P15735 406 aa12.59□□□□□ -0.39
PHC1-207ENST00000539928 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
PHC1-207ENST00000539928 IGSF1Q8N6C5 1336 aa12.59□□□□□ -0.39
PHC1-207ENST00000539928 NPM3O75607 178 aaKnown RBP12.58□□□□□ -0.4
PHC1-207ENST00000539928 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
PHC1-207ENST00000539928 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
PHC1-207ENST00000539928 KNSTRNQ9Y448 316 aa12.58□□□□□ -0.4
PHC1-207ENST00000539928 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
PHC1-207ENST00000539928 KIF7Q2M1P5 1343 aa12.57□□□□□ -0.4
PHC1-207ENST00000539928 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
PHC1-207ENST00000539928 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
PHC1-207ENST00000539928 HMGB2P26583 209 aaKnown RBP12.56□□□□□ -0.4
PHC1-207ENST00000539928 SIK1P57059 783 aa12.56□□□□□ -0.4
PHC1-207ENST00000539928 SMIM5Q71RC9 77 aa12.56□□□□□ -0.4
PHC1-207ENST00000539928 AMIGO3Q86WK7 504 aa12.56□□□□□ -0.4
PHC1-207ENST00000539928 CHD4Q14839 1912 aa12.55□□□□□ -0.4
PHC1-207ENST00000539928 GPR162Q16538 588 aa12.55□□□□□ -0.4
PHC1-207ENST00000539928 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
PHC1-207ENST00000539928 AEBP1Q8IUX7 1158 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms