RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 SUPT6HQ7KZ85 1726 aaKnown RBP7.36□□□□□ -1.23
SNHG1-211ENST00000539921 ELP1O95163 1332 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 STK25O00506 426 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 IRX1P78414 480 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-211ENST00000539921 LRCH2Q5VUJ6 765 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 CHADLQ6NUI6 762 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 FAM43BQ6ZT52 329 aaPredicted RBP7.36□□□□□ -1.23
SNHG1-211ENST00000539921 SRLQ86TD4 932 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 GPATCH11Q8N954 259 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.36□□□□□ -1.236e-32■□□□□ 8.9
SNHG1-211ENST00000539921 POLKQ9UBT6 870 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 ATP10AO60312 1499 aa7.36□□□□□ -1.23
SNHG1-211ENST00000539921 PYGBP11216 843 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 MMS22LQ6ZRQ5 1243 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 SKAP1Q86WV1 359 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 MSL3Q8N5Y2 521 aaKnown RBP7.35□□□□□ -1.23
SNHG1-211ENST00000539921 ZNF592Q92610 1267 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 ERO1AQ96HE7 468 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 PAIP2Q9BPZ3 127 aaKnown RBP7.35□□□□□ -1.23
SNHG1-211ENST00000539921 SUFUQ9UMX1 484 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 FAM135AQ9P2D6 1515 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 PIK3C2GO75747 1445 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 ANKRD50Q9ULJ7 1429 aa7.35□□□□□ -1.23
SNHG1-211ENST00000539921 UGGT2Q9NYU1 1516 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 EIF3JO75822 258 aaKnown RBP7.34□□□□□ -1.23
SNHG1-211ENST00000539921 SLFN5Q08AF3 891 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 NBPF8Q3BBV2 869 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 CCDC112Q8NEF3 446 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 ANKRD20A12PQ8NF67 263 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 FBXO18Q8NFZ0 1043 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 RNF217Q8TC41 542 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 EXOC4Q96A65 974 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 AK7Q96M32 723 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 TEX13AQ9BXU3 409 aaPredicted RBP7.34□□□□□ -1.23
SNHG1-211ENST00000539921 UBXN6Q9BZV1 441 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 KCND1Q9NSA2 647 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 MRVI1Q9Y6F6 885 aa7.34□□□□□ -1.23
SNHG1-211ENST00000539921 GPRASP1Q5JY77 1395 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 PTPRCP08575 1304 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 CCDC171Q6TFL3 1326 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 TMCO5BA8MYB1 307 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 IGHDP01880 384 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 MAP2K2P36507 400 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 ANAPC15P60006 121 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 SARNPP82979 210 aaKnown RBP7.33□□□□□ -1.24
SNHG1-211ENST00000539921 SEMA3FQ13275 785 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 MTA1Q13330 715 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 NKX1-1Q15270 411 aaPredicted RBP7.33□□□□□ -1.24
SNHG1-211ENST00000539921 P3H3Q8IVL6 736 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 SGSM3Q96HU1 749 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.33□□□□□ -1.241e-323■■■■□ 19.6
SNHG1-211ENST00000539921 PTPRGP23470 1445 aa7.33□□□□□ -1.24
SNHG1-211ENST00000539921 IRF6O14896 467 aa7.32□□□□□ -1.24
SNHG1-211ENST00000539921 NEMFO60524 1076 aa7.32□□□□□ -1.24
SNHG1-211ENST00000539921 TPM1P09493 284 aa7.32□□□□□ -1.24
SNHG1-211ENST00000539921 H2AFXP16104 143 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 HDAC1Q13547 482 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 DHX8Q14562 1220 aaKnown RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 ZSCAN26Q16670 478 aa7.32□□□□□ -1.24
SNHG1-211ENST00000539921 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 ERCC4Q92889 916 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 ZNF446Q9NWS9 450 aa7.32□□□□□ -1.24
SNHG1-211ENST00000539921 MKRN1Q9UHC7 482 aaKnown RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 CFAP74Q9C0B2 1584 aa7.32□□□□□ -1.24
SNHG1-211ENST00000539921 PRDM15P57071 1507 aaPredicted RBP7.32□□□□□ -1.24
SNHG1-211ENST00000539921 CCDC141Q6ZP82 1450 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 COL17A1Q9UMD9 1497 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 IGSF3O75054 1194 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 IPO7O95373 1038 aaKnown RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 RBM6P78332 1123 aaKnown RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 ICA1Q05084 483 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 ZRSR1Q15695 479 aaKnown RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 TSGA10IPQ3SY00 556 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 CCDC30Q5VVM6 783 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 JAKMIP3Q5VZ66 844 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 SYT10Q6XYQ8 523 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 ANKRD23Q86SG2 305 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 FMNL3Q8IVF7 1028 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 EFCAB13Q8IY85 973 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 MPHOSPH9Q99550 1183 aa7.31□□□□□ -1.24
SNHG1-211ENST00000539921 RYDENQ9NUL5 291 aaKnown RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 ARGLU1Q9NWB6 273 aaPredicted RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 RRP15Q9Y3B9 282 aaKnown RBP7.31□□□□□ -1.24
SNHG1-211ENST00000539921 CLTCL1P53675 1640 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 ANKRD18BA2A2Z9 1011 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 ERICH4A6NGS2 130 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 CT47B1P0C2W7 299 aaPredicted RBP7.3□□□□□ -1.24
SNHG1-211ENST00000539921 SSFA2P28290 1259 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 KMT5BQ4FZB7 885 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 BMP2KLQ5H9B9 411 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 TMEM87AQ8NBN3 555 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 TSC1Q92574 1164 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 PDZRN3Q9UPQ7 1066 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 STK24Q9Y6E0 443 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 RAD54L2Q9Y4B4 1467 aa7.3□□□□□ -1.24
SNHG1-211ENST00000539921 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.29□□□□□ -1.24
SNHG1-211ENST00000539921 H0YHG0 523 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms