RNA–Protein interactions for RNA: ENST00000539885.1

NCAPD2-209, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 3

Gene NCAPD2, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-209ENST00000539885 USHBP1Q8N6Y0 703 aa15.31■□□□□ 0.04
NCAPD2-209ENST00000539885 NHSQ6T4R5 1651 aa15.31■□□□□ 0.04
NCAPD2-209ENST00000539885 MAP2P11137 1827 aaKnown RBP15.3■□□□□ 0.04
NCAPD2-209ENST00000539885 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
NCAPD2-209ENST00000539885 PCDH11XQ9BZA7 1347 aa15.3■□□□□ 0.04
NCAPD2-209ENST00000539885 PCDH11YQ9BZA8 1340 aa15.3■□□□□ 0.04
NCAPD2-209ENST00000539885 SBF2Q86WG5 1849 aa15.29■□□□□ 0.04
NCAPD2-209ENST00000539885 RGPD2P0DJD1 1756 aa15.29■□□□□ 0.04
NCAPD2-209ENST00000539885 IGSF1Q8N6C5 1336 aa15.29■□□□□ 0.04
NCAPD2-209ENST00000539885 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
NCAPD2-209ENST00000539885 EYA1Q99502 592 aa15.29■□□□□ 0.04
NCAPD2-209ENST00000539885 RREB1Q92766 1687 aa15.28■□□□□ 0.04
NCAPD2-209ENST00000539885 DDX54Q8TDD1 881 aaKnown RBP15.28■□□□□ 0.04
NCAPD2-209ENST00000539885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.28■□□□□ 0.04
NCAPD2-209ENST00000539885 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
NCAPD2-209ENST00000539885 PKD1L3Q7Z443 1732 aa15.26■□□□□ 0.03
NCAPD2-209ENST00000539885 SHANK3Q9BYB0 1731 aa15.26■□□□□ 0.03
NCAPD2-209ENST00000539885 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
NCAPD2-209ENST00000539885 CC2D1BQ5T0F9 858 aaKnown RBP15.26■□□□□ 0.03
NCAPD2-209ENST00000539885 SPG7Q9UQ90 795 aa15.26■□□□□ 0.03
NCAPD2-209ENST00000539885 NUP188Q5SRE5 1749 aa15.24■□□□□ 0.03
NCAPD2-209ENST00000539885 KCNQ2O43526 872 aa15.24■□□□□ 0.03
NCAPD2-209ENST00000539885 NBPF14Q5TI25 921 aa15.24■□□□□ 0.03
NCAPD2-209ENST00000539885 PTF1AQ7RTS3 328 aa15.24■□□□□ 0.03
NCAPD2-209ENST00000539885 ACSBG1Q96GR2 724 aa15.24■□□□□ 0.03
NCAPD2-209ENST00000539885 KDRP35968 1356 aa15.24■□□□□ 0.03
NCAPD2-209ENST00000539885 SENP3-EIF4A1A0A087X0R7 540 aa15.23■□□□□ 0.03
NCAPD2-209ENST00000539885 MTHFSP49914 203 aa15.23■□□□□ 0.03
NCAPD2-209ENST00000539885 CYP27B1O15528 508 aa15.22■□□□□ 0.03
NCAPD2-209ENST00000539885 IL13P35225 146 aa15.22■□□□□ 0.03
NCAPD2-209ENST00000539885 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
NCAPD2-209ENST00000539885 NKX1-1Q15270 411 aaPredicted RBP15.21■□□□□ 0.03
NCAPD2-209ENST00000539885 TXNRD1Q16881 649 aa15.21■□□□□ 0.03
NCAPD2-209ENST00000539885 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
NCAPD2-209ENST00000539885 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
NCAPD2-209ENST00000539885 BTAF1O14981 1849 aa15.2■□□□□ 0.02
NCAPD2-209ENST00000539885 DIAPH1O60610 1272 aaKnown RBP15.19■□□□□ 0.02
NCAPD2-209ENST00000539885 R3HDM1Q15032 1099 aaKnown RBP15.19■□□□□ 0.02
NCAPD2-209ENST00000539885 IFNL2Q8IZJ0 200 aa15.19■□□□□ 0.02
NCAPD2-209ENST00000539885 SYTL4Q96C24 671 aaPredicted RBP15.19■□□□□ 0.02
NCAPD2-209ENST00000539885 COL3A1P02461 1466 aaPredicted RBP15.19■□□□□ 0.02
NCAPD2-209ENST00000539885 PLEKHO1Q53GL0 409 aaPredicted RBP15.18■□□□□ 0.02
NCAPD2-209ENST00000539885 SLC27A3Q5K4L6 730 aa15.18■□□□□ 0.02
NCAPD2-209ENST00000539885 PROM2Q8N271 834 aa15.18■□□□□ 0.02
NCAPD2-209ENST00000539885 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
NCAPD2-209ENST00000539885 HSP90AB1P08238 724 aaKnown RBP15.17■□□□□ 0.02
NCAPD2-209ENST00000539885 PHKG2P15735 406 aa15.17■□□□□ 0.02
NCAPD2-209ENST00000539885 HMGB2P26583 209 aaKnown RBP15.17■□□□□ 0.02
NCAPD2-209ENST00000539885 SULT6B1Q6IMI4 303 aa15.17■□□□□ 0.02
NCAPD2-209ENST00000539885 CFAP53Q96M91 514 aa15.17■□□□□ 0.02
NCAPD2-209ENST00000539885 AEBP1Q8IUX7 1158 aa15.16■□□□□ 0.02
NCAPD2-209ENST00000539885 PAPPAQ13219 1627 aa15.15■□□□□ 0.02
NCAPD2-209ENST00000539885 STK32BQ9NY57 414 aa15.15■□□□□ 0.02
NCAPD2-209ENST00000539885 PPP2R1AP30153 589 aa15.14■□□□□ 0.01
NCAPD2-209ENST00000539885 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
NCAPD2-209ENST00000539885 SMARCC1Q92922 1105 aaPredicted RBP15.14■□□□□ 0.01
NCAPD2-209ENST00000539885 DCAF5Q96JK2 942 aa15.14■□□□□ 0.01
NCAPD2-209ENST00000539885 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
NCAPD2-209ENST00000539885 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
NCAPD2-209ENST00000539885 CNGB1Q14028 1251 aaPredicted RBP15.13■□□□□ 0.01
NCAPD2-209ENST00000539885 C1orf141Q5JVX7 400 aa15.13■□□□□ 0.01
NCAPD2-209ENST00000539885 ERVV-2B6SEH9 535 aa15.12■□□□□ 0.01
NCAPD2-209ENST00000539885 SLC15A2Q16348 729 aa15.12■□□□□ 0.01
NCAPD2-209ENST00000539885 TMOD3Q9NYL9 352 aa15.12■□□□□ 0.01
NCAPD2-209ENST00000539885 LY75O60449 1722 aa15.12■□□□□ 0.01
NCAPD2-209ENST00000539885 PALLDQ8WX93 1383 aa15.11■□□□□ 0.01
NCAPD2-209ENST00000539885 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
NCAPD2-209ENST00000539885 LRRC4BQ9NT99 713 aa15.11■□□□□ 0.01
NCAPD2-209ENST00000539885 NUDCQ9Y266 331 aa15.11■□□□□ 0.01
NCAPD2-209ENST00000539885 PIGBQ92521 554 aa15.1■□□□□ 0.01
NCAPD2-209ENST00000539885 CCNL1Q9UK58 526 aaPredicted RBP15.1■□□□□ 0.01
NCAPD2-209ENST00000539885 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 U2SURPO15042 1029 aaKnown RBP15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 HMOX1P09601 288 aa15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 C1QTNF8P60827 252 aa15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 RALBP1Q15311 655 aa15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 ZNF784Q8NCA9 323 aaPredicted RBP15.09■□□□□ 0.01
NCAPD2-209ENST00000539885 AKT1S1Q96B36 256 aa15.08■□□□□ 0
NCAPD2-209ENST00000539885 CASZ1Q86V15 1759 aa15.08■□□□□ 0
NCAPD2-209ENST00000539885 DDX10Q13206 875 aaKnown RBP15.07■□□□□ 0
NCAPD2-209ENST00000539885 ITGB4P16144 1822 aa15.06■□□□□ 0
NCAPD2-209ENST00000539885 ZNF827Q17R98 1081 aa15.06■□□□□ 0
NCAPD2-209ENST00000539885 SPON1Q9HCB6 807 aa15.06■□□□□ 0
NCAPD2-209ENST00000539885 MRC1P22897 1456 aa15.06■□□□□ 0
NCAPD2-209ENST00000539885 CABP4P57796 275 aa15.05■□□□□ -0
NCAPD2-209ENST00000539885 GAS2L2Q8NHY3 880 aa15.05■□□□□ -0
NCAPD2-209ENST00000539885 KAT6BQ8WYB5 2073 aa15.05■□□□□ -0
NCAPD2-209ENST00000539885 QSER1Q2KHR3 1735 aa15.04■□□□□ -0
NCAPD2-209ENST00000539885 FCHSD2O94868 740 aa15.04■□□□□ -0
NCAPD2-209ENST00000539885 MTHFSDQ2M296 383 aaKnown RBP15.04■□□□□ -0
NCAPD2-209ENST00000539885 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
NCAPD2-209ENST00000539885 ADAMTS7Q9UKP4 1686 aa15.03■□□□□ -0
NCAPD2-209ENST00000539885 MAP3K5Q99683 1374 aa15.03■□□□□ -0
NCAPD2-209ENST00000539885 LOC102724428A0A0B4J2F2 783 aa15.03■□□□□ -0
NCAPD2-209ENST00000539885 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
NCAPD2-209ENST00000539885 SIK1P57059 783 aa15.03■□□□□ -0
NCAPD2-209ENST00000539885 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
NCAPD2-209ENST00000539885 SLC16A10Q8TF71 515 aa15.03■□□□□ -0
NCAPD2-209ENST00000539885 MTFR1LQ9H019 292 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms