RNA–Protein interactions for RNA: ENST00000539702.1

DDX11-216, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-216ENST00000539702 SLC27A3Q5K4L6 730 aa18.9■□□□□ 0.62
DDX11-216ENST00000539702 NBPF6Q5VWK0 638 aa18.9■□□□□ 0.62
DDX11-216ENST00000539702 NBPF4Q96M43 638 aa18.9■□□□□ 0.62
DDX11-216ENST00000539702 USHBP1Q8N6Y0 703 aa18.89■□□□□ 0.61
DDX11-216ENST00000539702 SGIP1Q9BQI5 828 aa18.89■□□□□ 0.61
DDX11-216ENST00000539702 FHDC1Q9C0D6 1143 aaPredicted RBP18.89■□□□□ 0.61
DDX11-216ENST00000539702 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
DDX11-216ENST00000539702 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
DDX11-216ENST00000539702 SYT17Q9BSW7 474 aa18.88■□□□□ 0.61
DDX11-216ENST00000539702 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
DDX11-216ENST00000539702 LY75O60449 1722 aa18.86■□□□□ 0.61
DDX11-216ENST00000539702 CGNL1Q0VF96 1302 aa18.86■□□□□ 0.61
DDX11-216ENST00000539702 KCNQ4P56696 695 aa18.86■□□□□ 0.61
DDX11-216ENST00000539702 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
DDX11-216ENST00000539702 ARXQ96QS3 562 aa18.86■□□□□ 0.61
DDX11-216ENST00000539702 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
DDX11-216ENST00000539702 NSD2O96028 1365 aa18.85■□□□□ 0.61
DDX11-216ENST00000539702 INSRP06213 1382 aa18.85■□□□□ 0.61
DDX11-216ENST00000539702 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
DDX11-216ENST00000539702 FLT4P35916 1363 aa18.84■□□□□ 0.61
DDX11-216ENST00000539702 TATP17735 454 aaPredicted RBP18.84■□□□□ 0.61
DDX11-216ENST00000539702 TFCP2L1Q9NZI6 479 aa18.84■□□□□ 0.61
DDX11-216ENST00000539702 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
DDX11-216ENST00000539702 TUBGCP6Q96RT7 1819 aa18.84■□□□□ 0.61
DDX11-216ENST00000539702 KIF24Q5T7B8 1368 aa18.83■□□□□ 0.61
DDX11-216ENST00000539702 SLC16A10Q8TF71 515 aa18.83■□□□□ 0.6
DDX11-216ENST00000539702 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.6
DDX11-216ENST00000539702 PNPLA7Q6ZV29 1317 aa18.82■□□□□ 0.6
DDX11-216ENST00000539702 CCNL1Q9UK58 526 aaPredicted RBP18.82■□□□□ 0.6
DDX11-216ENST00000539702 EMILIN1Q9Y6C2 1016 aa18.81■□□□□ 0.6
DDX11-216ENST00000539702 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
DDX11-216ENST00000539702 PCDH11XQ9BZA7 1347 aa18.79■□□□□ 0.6
DDX11-216ENST00000539702 PCDH11YQ9BZA8 1340 aa18.79■□□□□ 0.6
DDX11-216ENST00000539702 PPM1GO15355 546 aaPredicted RBP18.79■□□□□ 0.6
DDX11-216ENST00000539702 POLD1P28340 1107 aa18.79■□□□□ 0.6
DDX11-216ENST00000539702 MAP3K5Q99683 1374 aa18.79■□□□□ 0.6
DDX11-216ENST00000539702 MAP2P11137 1827 aaKnown RBP18.79■□□□□ 0.6
DDX11-216ENST00000539702 COL24A1Q17RW2 1714 aa18.78■□□□□ 0.6
DDX11-216ENST00000539702 CHD4Q14839 1912 aa18.78■□□□□ 0.6
DDX11-216ENST00000539702 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
DDX11-216ENST00000539702 KLHL34Q8N239 644 aa18.77■□□□□ 0.6
DDX11-216ENST00000539702 POLR3GLQ9BT43 218 aa18.77■□□□□ 0.6
DDX11-216ENST00000539702 UTRNP46939 3433 aa18.77■□□□□ 0.59
DDX11-216ENST00000539702 CYP27B1O15528 508 aa18.76■□□□□ 0.59
DDX11-216ENST00000539702 ANKRD26Q9UPS8 1709 aa18.75■□□□□ 0.59
DDX11-216ENST00000539702 ITGB4P16144 1822 aa18.75■□□□□ 0.59
DDX11-216ENST00000539702 MSH5O43196 834 aa18.75■□□□□ 0.59
DDX11-216ENST00000539702 MPRIPQ6WCQ1 1025 aa18.75■□□□□ 0.59
DDX11-216ENST00000539702 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
DDX11-216ENST00000539702 C5P01031 1676 aa18.74■□□□□ 0.59
DDX11-216ENST00000539702 WASHC2AQ641Q2 1341 aa18.74■□□□□ 0.59
DDX11-216ENST00000539702 COL23A1Q86Y22 540 aaPredicted RBP18.73■□□□□ 0.59
DDX11-216ENST00000539702 TOGARAM1Q9Y4F4 1720 aa18.73■□□□□ 0.59
DDX11-216ENST00000539702 TAF1LQ8IZX4 1826 aa18.72■□□□□ 0.59
DDX11-216ENST00000539702 PALLDQ8WX93 1383 aa18.72■□□□□ 0.59
DDX11-216ENST00000539702 GPR162Q16538 588 aa18.72■□□□□ 0.59
DDX11-216ENST00000539702 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
DDX11-216ENST00000539702 HMGB2P26583 209 aaKnown RBP18.71■□□□□ 0.59
DDX11-216ENST00000539702 ZNF784Q8NCA9 323 aaPredicted RBP18.71■□□□□ 0.59
DDX11-216ENST00000539702 EYA1Q99502 592 aa18.71■□□□□ 0.59
DDX11-216ENST00000539702 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
DDX11-216ENST00000539702 SPG7Q9UQ90 795 aa18.71■□□□□ 0.59
DDX11-216ENST00000539702 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
DDX11-216ENST00000539702 TNNT2P45379 298 aaPredicted RBP18.69■□□□□ 0.58
DDX11-216ENST00000539702 NKX1-1Q15270 411 aaPredicted RBP18.69■□□□□ 0.58
DDX11-216ENST00000539702 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
DDX11-216ENST00000539702 EIF4G2P78344 907 aaKnown RBP eCLIP18.68■□□□□ 0.58
DDX11-216ENST00000539702 MSL1Q68DK7 614 aa18.68■□□□□ 0.58
DDX11-216ENST00000539702 PIGBQ92521 554 aa18.68■□□□□ 0.58
DDX11-216ENST00000539702 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
DDX11-216ENST00000539702 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
DDX11-216ENST00000539702 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.67■□□□□ 0.58
DDX11-216ENST00000539702 C4BP0C0L5 1744 aa18.66■□□□□ 0.58
DDX11-216ENST00000539702 HSPA5P11021 654 aaKnown RBP18.66■□□□□ 0.58
DDX11-216ENST00000539702 EIF4A2Q14240 407 aaKnown RBP18.65■□□□□ 0.58
DDX11-216ENST00000539702 AK7Q96M32 723 aa18.65■□□□□ 0.58
DDX11-216ENST00000539702 IFNL2Q8IZJ0 200 aa18.64■□□□□ 0.57
DDX11-216ENST00000539702 PANK3Q9H999 370 aa18.64■□□□□ 0.57
DDX11-216ENST00000539702 TMOD3Q9NYL9 352 aa18.64■□□□□ 0.57
DDX11-216ENST00000539702 UBR3Q6ZT12 1888 aa18.63■□□□□ 0.57
DDX11-216ENST00000539702 PHKG2P15735 406 aa18.63■□□□□ 0.57
DDX11-216ENST00000539702 LOC102724428A0A0B4J2F2 783 aa18.62■□□□□ 0.57
DDX11-216ENST00000539702 SIK1P57059 783 aa18.62■□□□□ 0.57
DDX11-216ENST00000539702 CCER1Q8TC90 406 aaPredicted RBP18.62■□□□□ 0.57
DDX11-216ENST00000539702 PHF14O94880 888 aa18.61■□□□□ 0.57
DDX11-216ENST00000539702 ASAP1Q9ULH1 1129 aa18.61■□□□□ 0.57
DDX11-216ENST00000539702 GOLGB1Q14789 3259 aaKnown RBP18.61■□□□□ 0.57
DDX11-216ENST00000539702 SMIM5Q71RC9 77 aa18.6■□□□□ 0.57
DDX11-216ENST00000539702 AMIGO3Q86WK7 504 aa18.6■□□□□ 0.57
DDX11-216ENST00000539702 IGSF1Q8N6C5 1336 aa18.59■□□□□ 0.57
DDX11-216ENST00000539702 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
DDX11-216ENST00000539702 YBX3P16989 372 aaKnown RBP eCLIP18.59■□□□□ 0.57
DDX11-216ENST00000539702 LINC00116Q8NCU8 138 aa18.59■□□□□ 0.57
DDX11-216ENST00000539702 CD2APQ9Y5K6 639 aa18.59■□□□□ 0.57
DDX11-216ENST00000539702 GRIN3BO60391 1043 aa18.58■□□□□ 0.56
DDX11-216ENST00000539702 ATP6V1AP38606 617 aa18.58■□□□□ 0.56
DDX11-216ENST00000539702 PLEKHG2Q9H7P9 1386 aa18.57■□□□□ 0.56
DDX11-216ENST00000539702 SSFA2P28290 1259 aa18.57■□□□□ 0.56
DDX11-216ENST00000539702 ITPK1Q13572 414 aa18.57■□□□□ 0.56
DDX11-216ENST00000539702 MORC1Q86VD1 984 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms