RNA–Protein interactions for RNA: ENST00000539649.1

PGA3-205, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-205ENST00000539649 PER1O15534 1290 aaPredicted RBP13.54□□□□□ -0.24
PGA3-205ENST00000539649 TNNT2P45379 298 aaPredicted RBP13.54□□□□□ -0.24
PGA3-205ENST00000539649 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
PGA3-205ENST00000539649 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
PGA3-205ENST00000539649 PPM1GO15355 546 aaPredicted RBP13.53□□□□□ -0.24
PGA3-205ENST00000539649 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
PGA3-205ENST00000539649 ANO8Q9HCE9 1232 aaPredicted RBP13.53□□□□□ -0.24
PGA3-205ENST00000539649 TXNRD1Q16881 649 aa13.52□□□□□ -0.25
PGA3-205ENST00000539649 MORC1Q86VD1 984 aa13.52□□□□□ -0.25
PGA3-205ENST00000539649 NHSQ6T4R5 1651 aa13.51□□□□□ -0.25
PGA3-205ENST00000539649 ACSBG1Q96GR2 724 aa13.5□□□□□ -0.25
PGA3-205ENST00000539649 NPC1L1Q9UHC9 1359 aa13.49□□□□□ -0.25
PGA3-205ENST00000539649 EIF4A2Q14240 407 aaKnown RBP13.49□□□□□ -0.25
PGA3-205ENST00000539649 ZCRB1Q8TBF4 217 aaKnown RBP13.49□□□□□ -0.25
PGA3-205ENST00000539649 EYA1Q99502 592 aa13.49□□□□□ -0.25
PGA3-205ENST00000539649 SLC15A2Q16348 729 aa13.48□□□□□ -0.25
PGA3-205ENST00000539649 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
PGA3-205ENST00000539649 RAPGEF4Q8WZA2 1011 aa13.48□□□□□ -0.25
PGA3-205ENST00000539649 SPON1Q9HCB6 807 aa13.48□□□□□ -0.25
PGA3-205ENST00000539649 PKD1L3Q7Z443 1732 aa13.47□□□□□ -0.25
PGA3-205ENST00000539649 TATP17735 454 aaPredicted RBP13.47□□□□□ -0.25
PGA3-205ENST00000539649 PDGFDQ9GZP0 370 aaPredicted RBP13.47□□□□□ -0.25
PGA3-205ENST00000539649 BTAF1O14981 1849 aa13.46□□□□□ -0.25
PGA3-205ENST00000539649 PAPPAQ13219 1627 aa13.46□□□□□ -0.26
PGA3-205ENST00000539649 IGSF1Q8N6C5 1336 aa13.45□□□□□ -0.26
PGA3-205ENST00000539649 DOT1LQ8TEK3 1739 aa13.45□□□□□ -0.26
PGA3-205ENST00000539649 CC2D1BQ5T0F9 858 aaKnown RBP13.45□□□□□ -0.26
PGA3-205ENST00000539649 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
PGA3-205ENST00000539649 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
PGA3-205ENST00000539649 CASZ1Q86V15 1759 aa13.45□□□□□ -0.26
PGA3-205ENST00000539649 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
PGA3-205ENST00000539649 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
PGA3-205ENST00000539649 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
PGA3-205ENST00000539649 CYP27B1O15528 508 aa13.43□□□□□ -0.26
PGA3-205ENST00000539649 PTGER2P43116 358 aa13.43□□□□□ -0.26
PGA3-205ENST00000539649 PRIM1P49642 420 aaKnown RBP13.43□□□□□ -0.26
PGA3-205ENST00000539649 SLC27A3Q5K4L6 730 aa13.43□□□□□ -0.26
PGA3-205ENST00000539649 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
PGA3-205ENST00000539649 MTHFSP49914 203 aa13.42□□□□□ -0.26
PGA3-205ENST00000539649 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
PGA3-205ENST00000539649 IL13P35225 146 aa13.41□□□□□ -0.26
PGA3-205ENST00000539649 ZNF827Q17R98 1081 aa13.41□□□□□ -0.26
PGA3-205ENST00000539649 SGIP1Q9BQI5 828 aa13.41□□□□□ -0.26
PGA3-205ENST00000539649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.41□□□□□ -0.26
PGA3-205ENST00000539649 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
PGA3-205ENST00000539649 ZBTB7AO95365 584 aa13.4□□□□□ -0.26
PGA3-205ENST00000539649 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
PGA3-205ENST00000539649 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
PGA3-205ENST00000539649 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
PGA3-205ENST00000539649 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
PGA3-205ENST00000539649 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
PGA3-205ENST00000539649 SYTL4Q96C24 671 aaPredicted RBP13.39□□□□□ -0.27
PGA3-205ENST00000539649 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
PGA3-205ENST00000539649 KDRP35968 1356 aa13.39□□□□□ -0.27
PGA3-205ENST00000539649 ITGB4P16144 1822 aa13.37□□□□□ -0.27
PGA3-205ENST00000539649 LY75O60449 1722 aa13.37□□□□□ -0.27
PGA3-205ENST00000539649 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
PGA3-205ENST00000539649 PHKG2P15735 406 aa13.36□□□□□ -0.27
PGA3-205ENST00000539649 SULT6B1Q6IMI4 303 aa13.36□□□□□ -0.27
PGA3-205ENST00000539649 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
PGA3-205ENST00000539649 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
PGA3-205ENST00000539649 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
PGA3-205ENST00000539649 KCNQ4P56696 695 aa13.35□□□□□ -0.27
PGA3-205ENST00000539649 IFNL2Q8IZJ0 200 aa13.35□□□□□ -0.27
PGA3-205ENST00000539649 SLC16A10Q8TF71 515 aa13.35□□□□□ -0.27
PGA3-205ENST00000539649 PLEKHO1Q53GL0 409 aaPredicted RBP13.34□□□□□ -0.27
PGA3-205ENST00000539649 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
PGA3-205ENST00000539649 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
PGA3-205ENST00000539649 AMOTQ4VCS5 1084 aa13.33□□□□□ -0.28
PGA3-205ENST00000539649 ZNF530Q6P9A1 599 aaPredicted RBP13.33□□□□□ -0.28
PGA3-205ENST00000539649 MPRIPQ6WCQ1 1025 aa13.33□□□□□ -0.28
PGA3-205ENST00000539649 PIGBQ92521 554 aa13.33□□□□□ -0.28
PGA3-205ENST00000539649 PALLDQ8WX93 1383 aa13.32□□□□□ -0.28
PGA3-205ENST00000539649 MAP3K5Q99683 1374 aa13.32□□□□□ -0.28
PGA3-205ENST00000539649 KDM6AO15550 1401 aaPredicted RBP13.32□□□□□ -0.28
PGA3-205ENST00000539649 HMOX1P09601 288 aa13.32□□□□□ -0.28
PGA3-205ENST00000539649 SYT17Q9BSW7 474 aa13.32□□□□□ -0.28
PGA3-205ENST00000539649 TFCP2L1Q9NZI6 479 aa13.32□□□□□ -0.28
PGA3-205ENST00000539649 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
PGA3-205ENST00000539649 ARXQ96QS3 562 aa13.31□□□□□ -0.28
PGA3-205ENST00000539649 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
PGA3-205ENST00000539649 HSP90AB1P08238 724 aaKnown RBP13.3□□□□□ -0.28
PGA3-205ENST00000539649 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
PGA3-205ENST00000539649 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
PGA3-205ENST00000539649 DCAF5Q96JK2 942 aa13.3□□□□□ -0.28
PGA3-205ENST00000539649 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
PGA3-205ENST00000539649 QSER1Q2KHR3 1735 aa13.3□□□□□ -0.28
PGA3-205ENST00000539649 ERVV-2B6SEH9 535 aa13.29□□□□□ -0.28
PGA3-205ENST00000539649 COL23A1Q86Y22 540 aaPredicted RBP13.29□□□□□ -0.28
PGA3-205ENST00000539649 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
PGA3-205ENST00000539649 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
PGA3-205ENST00000539649 C5P01031 1676 aa13.28□□□□□ -0.28
PGA3-205ENST00000539649 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
PGA3-205ENST00000539649 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
PGA3-205ENST00000539649 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
PGA3-205ENST00000539649 DDX10Q13206 875 aaKnown RBP13.28□□□□□ -0.28
PGA3-205ENST00000539649 C1orf141Q5JVX7 400 aa13.28□□□□□ -0.28
PGA3-205ENST00000539649 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
PGA3-205ENST00000539649 SCN11AQ9UI33 1791 aa13.27□□□□□ -0.28
PGA3-205ENST00000539649 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms