RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 FHDC1Q9C0D6 1143 aaPredicted RBP12.22□□□□□ -0.45
RTN4IP1-204ENST00000539449 U2SURPO15042 1029 aaKnown RBP12.21□□□□□ -0.45
RTN4IP1-204ENST00000539449 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
RTN4IP1-204ENST00000539449 EIF4A2Q14240 407 aaKnown RBP12.21□□□□□ -0.45
RTN4IP1-204ENST00000539449 PDGFDQ9GZP0 370 aaPredicted RBP12.21□□□□□ -0.45
RTN4IP1-204ENST00000539449 SALL2Q9Y467 1007 aaPredicted RBP12.21□□□□□ -0.45
RTN4IP1-204ENST00000539449 RGPD2P0DJD1 1756 aa12.2□□□□□ -0.46
RTN4IP1-204ENST00000539449 GCP02774 474 aa12.2□□□□□ -0.46
RTN4IP1-204ENST00000539449 U2AF1L5P0DN76 240 aaPredicted RBP12.2□□□□□ -0.46
RTN4IP1-204ENST00000539449 U2AF1Q01081 240 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTN4IP1-204ENST00000539449 SPATA31A1Q5TZJ5 1347 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 ZBTB7CA1YPR0 619 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 HOXC9P31274 260 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 AMPHP49418 695 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 ANO8Q9HCE9 1232 aaPredicted RBP12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 ATF5Q9Y2D1 282 aaPredicted RBP12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 RGPD3A6NKT7 1758 aaPredicted RBP12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 COL18A1P39060 1754 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
RTN4IP1-204ENST00000539449 APAF1O14727 1248 aa12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 ZC3H6P61129 1189 aaKnown RBP12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 PDE3BQ13370 1112 aa12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 ARHGEF25Q86VW2 580 aa12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 KCNH5Q8NCM2 988 aa12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 NUDCQ9Y266 331 aa12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 FLT4P35916 1363 aa12.18□□□□□ -0.46
RTN4IP1-204ENST00000539449 ZBED9Q6R2W3 1325 aa12.17□□□□□ -0.46
RTN4IP1-204ENST00000539449 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
RTN4IP1-204ENST00000539449 HMOX1P09601 288 aa12.17□□□□□ -0.46
RTN4IP1-204ENST00000539449 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
RTN4IP1-204ENST00000539449 AEBP1Q8IUX7 1158 aa12.16□□□□□ -0.46
RTN4IP1-204ENST00000539449 IP6K1Q92551 441 aa12.16□□□□□ -0.46
RTN4IP1-204ENST00000539449 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
RTN4IP1-204ENST00000539449 LTV1Q96GA3 475 aaPredicted RBP12.16□□□□□ -0.46
RTN4IP1-204ENST00000539449 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
RTN4IP1-204ENST00000539449 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
RTN4IP1-204ENST00000539449 RRP7AQ9Y3A4 280 aaKnown RBP12.15□□□□□ -0.46
RTN4IP1-204ENST00000539449 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
RTN4IP1-204ENST00000539449 DLG5Q8TDM6 1919 aa12.14□□□□□ -0.47
RTN4IP1-204ENST00000539449 GPR162Q16538 588 aa12.14□□□□□ -0.47
RTN4IP1-204ENST00000539449 TCP11L2Q8N4U5 519 aa12.14□□□□□ -0.47
RTN4IP1-204ENST00000539449 EYA1Q99502 592 aa12.14□□□□□ -0.47
RTN4IP1-204ENST00000539449 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
RTN4IP1-204ENST00000539449 PLSCR1O15162 318 aa12.13□□□□□ -0.47
RTN4IP1-204ENST00000539449 HSPA6P17066 643 aa12.13□□□□□ -0.47
RTN4IP1-204ENST00000539449 PRKAR2BP31323 418 aa12.13□□□□□ -0.47
RTN4IP1-204ENST00000539449 CHRNA2Q15822 529 aa12.13□□□□□ -0.47
RTN4IP1-204ENST00000539449 PHACTR3Q96KR7 559 aa12.13□□□□□ -0.47
RTN4IP1-204ENST00000539449 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
RTN4IP1-204ENST00000539449 SBF2Q86WG5 1849 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 FCHSD2O94868 740 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 BARGINQ6ZT62 677 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 STRN4Q9NRL3 753 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 USP35Q9P2H5 1018 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 KIAA0232Q92628 1395 aa12.12□□□□□ -0.47
RTN4IP1-204ENST00000539449 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 MAP3K5Q99683 1374 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 NBPF6Q5VWK0 638 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 USHBP1Q8N6Y0 703 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 NBPF4Q96M43 638 aa12.11□□□□□ -0.47
RTN4IP1-204ENST00000539449 LMO7Q8WWI1 1683 aa12.1□□□□□ -0.47
RTN4IP1-204ENST00000539449 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
RTN4IP1-204ENST00000539449 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
RTN4IP1-204ENST00000539449 ARXQ96QS3 562 aa12.1□□□□□ -0.47
RTN4IP1-204ENST00000539449 MTFR1LQ9H019 292 aa12.1□□□□□ -0.47
RTN4IP1-204ENST00000539449 CPDO75976 1380 aa12.09□□□□□ -0.47
RTN4IP1-204ENST00000539449 CAPN15O75808 1086 aa12.09□□□□□ -0.47
RTN4IP1-204ENST00000539449 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
RTN4IP1-204ENST00000539449 PARP4Q9UKK3 1724 aaKnown RBP12.08□□□□□ -0.47
RTN4IP1-204ENST00000539449 KDRP35968 1356 aa12.08□□□□□ -0.48
RTN4IP1-204ENST00000539449 PROM2Q8N271 834 aa12.08□□□□□ -0.48
RTN4IP1-204ENST00000539449 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
RTN4IP1-204ENST00000539449 GOLGB1Q14789 3259 aaKnown RBP12.08□□□□□ -0.48
RTN4IP1-204ENST00000539449 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
RTN4IP1-204ENST00000539449 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
RTN4IP1-204ENST00000539449 WWC1Q8IX03 1113 aa12.07□□□□□ -0.48
RTN4IP1-204ENST00000539449 STK32BQ9NY57 414 aa12.07□□□□□ -0.48
RTN4IP1-204ENST00000539449 OVOS2A0A0G2JMS6 1433 aa12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 RIPK4P57078 832 aa12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 NFE2L2Q16236 605 aa12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 PELP1Q8IZL8 1130 aaKnown RBP12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 PNNQ9H307 717 aaKnown RBP12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 ERBB3P21860 1342 aa12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 ABCC6O95255 1503 aa12.06□□□□□ -0.48
RTN4IP1-204ENST00000539449 NCAPD2Q15021 1401 aa12.05□□□□□ -0.48
RTN4IP1-204ENST00000539449 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
RTN4IP1-204ENST00000539449 EVA1CP58658 441 aa12.05□□□□□ -0.48
RTN4IP1-204ENST00000539449 SLFN5Q08AF3 891 aa12.05□□□□□ -0.48
RTN4IP1-204ENST00000539449 PTF1AQ7RTS3 328 aa12.05□□□□□ -0.48
RTN4IP1-204ENST00000539449 SLC34A2O95436 690 aa12.04□□□□□ -0.48
RTN4IP1-204ENST00000539449 GOLGA2Q08379 1002 aa12.04□□□□□ -0.48
RTN4IP1-204ENST00000539449 CCDC27Q2M243 656 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms