RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 KIF14Q15058 1648 aa17.31■□□□□ 0.36
CACNB1-206ENST00000539338 MYL6BP14649 208 aa17.31■□□□□ 0.36
CACNB1-206ENST00000539338 NCOA1Q15788 1441 aa17.31■□□□□ 0.36
CACNB1-206ENST00000539338 SMC2O95347 1197 aa17.3■□□□□ 0.36
CACNB1-206ENST00000539338 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
CACNB1-206ENST00000539338 WDR33Q9C0J8 1336 aaKnown RBP17.3■□□□□ 0.36
CACNB1-206ENST00000539338 EXOC6BQ9Y2D4 811 aa17.3■□□□□ 0.36
CACNB1-206ENST00000539338 FOXO3O43524 673 aa17.29■□□□□ 0.36
CACNB1-206ENST00000539338 RRP12Q5JTH9 1297 aaKnown RBP17.29■□□□□ 0.36
CACNB1-206ENST00000539338 CWC27Q6UX04 472 aaKnown RBP17.29■□□□□ 0.36
CACNB1-206ENST00000539338 AACSQ86V21 672 aa17.29■□□□□ 0.36
CACNB1-206ENST00000539338 RPAP2Q8IXW5 612 aaPredicted RBP17.29■□□□□ 0.36
CACNB1-206ENST00000539338 UHRF1BP1LA0JNW5 1464 aa17.29■□□□□ 0.36
CACNB1-206ENST00000539338 WDR62O43379 1518 aa17.29■□□□□ 0.36
CACNB1-206ENST00000539338 STK38Q15208 465 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 TEX35Q5T0J7 233 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 MCM10Q7L590 875 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 BRMS1Q9HCU9 246 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 WAPLQ7Z5K2 1190 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 STARD3NLO95772 234 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 ARGLU1Q9NWB6 273 aaPredicted RBP17.28■□□□□ 0.36
CACNB1-206ENST00000539338 XBP1P17861 261 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 TMOD3Q9NYL9 352 aa17.28■□□□□ 0.36
CACNB1-206ENST00000539338 NKTRP30414 1462 aaKnown RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 RBM10P98175 930 aaKnown RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 SAMD1Q6SPF0 538 aaPredicted RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 SMARCA5O60264 1052 aaPredicted RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 NAP1L1P55209 391 aaKnown RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 LARP1BQ659C4 914 aaKnown RBP17.27■□□□□ 0.36
CACNB1-206ENST00000539338 TTLL5Q6EMB2 1281 aa17.27■□□□□ 0.35
CACNB1-206ENST00000539338 TMOD2Q9NZR1 351 aa17.27■□□□□ 0.35
CACNB1-206ENST00000539338 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.35
CACNB1-206ENST00000539338 ZNF396Q96N95 335 aaPredicted RBP17.27■□□□□ 0.35
CACNB1-206ENST00000539338 CIZ1Q9ULV3 898 aaPredicted RBP17.27■□□□□ 0.35
CACNB1-206ENST00000539338 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
CACNB1-206ENST00000539338 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
CACNB1-206ENST00000539338 ZNF518AQ6AHZ1 1483 aa17.26■□□□□ 0.35
CACNB1-206ENST00000539338 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
CACNB1-206ENST00000539338 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
CACNB1-206ENST00000539338 JAKMIP1Q96N16 626 aaKnown RBP17.26■□□□□ 0.35
CACNB1-206ENST00000539338 CCDC192P0DO97 292 aa17.25■□□□□ 0.35
CACNB1-206ENST00000539338 TNMDQ9H2S6 317 aa17.25■□□□□ 0.35
CACNB1-206ENST00000539338 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
CACNB1-206ENST00000539338 DUSP27Q5VZP5 1158 aa17.25■□□□□ 0.35
CACNB1-206ENST00000539338 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
CACNB1-206ENST00000539338 KRT85P78386 507 aa17.25■□□□□ 0.35
CACNB1-206ENST00000539338 BTBD11A6QL63 1104 aa17.24■□□□□ 0.35
CACNB1-206ENST00000539338 PDRG1Q9NUG6 133 aa17.24■□□□□ 0.35
CACNB1-206ENST00000539338 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
CACNB1-206ENST00000539338 RXRBP28702 533 aa17.24■□□□□ 0.35
CACNB1-206ENST00000539338 ANKRD1Q15327 319 aa17.24■□□□□ 0.35
CACNB1-206ENST00000539338 BLOC1S2Q6QNY1 142 aa17.24■□□□□ 0.35
CACNB1-206ENST00000539338 TTLL12Q14166 644 aaPredicted RBP17.24■□□□□ 0.35
CACNB1-206ENST00000539338 RPRD2Q5VT52 1461 aaKnown RBP17.24■□□□□ 0.35
CACNB1-206ENST00000539338 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
CACNB1-206ENST00000539338 ME1P48163 572 aa17.23■□□□□ 0.35
CACNB1-206ENST00000539338 CNKSR2Q8WXI2 1034 aa17.23■□□□□ 0.35
CACNB1-206ENST00000539338 SMARCC1Q92922 1105 aaPredicted RBP17.23■□□□□ 0.35
CACNB1-206ENST00000539338 NME9Q86XW9 330 aa17.22■□□□□ 0.35
CACNB1-206ENST00000539338 CLEC11AQ9Y240 323 aa17.22■□□□□ 0.35
CACNB1-206ENST00000539338 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
CACNB1-206ENST00000539338 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
CACNB1-206ENST00000539338 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACNB1-206ENST00000539338 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
CACNB1-206ENST00000539338 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.35
CACNB1-206ENST00000539338 GNAT3A8MTJ3 354 aa17.21■□□□□ 0.35
CACNB1-206ENST00000539338 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
CACNB1-206ENST00000539338 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
CACNB1-206ENST00000539338 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
CACNB1-206ENST00000539338 ABCC2Q92887 1545 aa17.21■□□□□ 0.35
CACNB1-206ENST00000539338 A0A087WZG4 1122 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 CDCA7Q9BWT1 371 aaPredicted RBP17.2■□□□□ 0.34
CACNB1-206ENST00000539338 ALDH1L2Q3SY69 923 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 ESPNB1AK53 854 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 TRIM27P14373 513 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 SPATA32Q96LK8 384 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 MAP7D2Q96T17 732 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.2■□□□□ 0.34
CACNB1-206ENST00000539338 PRM3Q9NNZ6 103 aa17.2■□□□□ 0.34
CACNB1-206ENST00000539338 MX1P20591 662 aa17.19■□□□□ 0.34
CACNB1-206ENST00000539338 CASTP20810 708 aaKnown RBP17.19■□□□□ 0.34
CACNB1-206ENST00000539338 SYCE3A1L190 88 aa17.19■□□□□ 0.34
CACNB1-206ENST00000539338 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
CACNB1-206ENST00000539338 CCDC43Q96MW1 224 aaKnown RBP17.19■□□□□ 0.34
CACNB1-206ENST00000539338 F6X3S4 739 aa17.19■□□□□ 0.34
CACNB1-206ENST00000539338 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
CACNB1-206ENST00000539338 RUFY1Q96T51 708 aa17.19■□□□□ 0.34
CACNB1-206ENST00000539338 TBC1D2Q9BYX2 928 aa17.19■□□□□ 0.34
CACNB1-206ENST00000539338 HSP90B2PQ58FF3 399 aa17.18■□□□□ 0.34
CACNB1-206ENST00000539338 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
CACNB1-206ENST00000539338 DDB1Q16531 1140 aa17.18■□□□□ 0.34
CACNB1-206ENST00000539338 GPR162Q16538 588 aa17.18■□□□□ 0.34
CACNB1-206ENST00000539338 SERPINC1P01008 464 aa17.18■□□□□ 0.34
CACNB1-206ENST00000539338 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
CACNB1-206ENST00000539338 ZSCAN31Q96LW9 406 aaPredicted RBP17.17■□□□□ 0.34
CACNB1-206ENST00000539338 USP21Q9UK80 565 aa17.17■□□□□ 0.34
CACNB1-206ENST00000539338 CAGE1Q8TC20 777 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms