RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 NCAPD2Q15021 1401 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 JCADQ9P266 1359 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 HSPA1LP34931 641 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
DDB1-213ENST00000539332 COL14A1Q05707 1796 aaKnown RBP11.51□□□□□ -0.57
DDB1-213ENST00000539332 FAM83GA6ND36 823 aa11.5□□□□□ -0.57
DDB1-213ENST00000539332 NFE2L2Q16236 605 aa11.5□□□□□ -0.57
DDB1-213ENST00000539332 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
DDB1-213ENST00000539332 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
DDB1-213ENST00000539332 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
DDB1-213ENST00000539332 PPP4R2Q9NY27 417 aa11.49□□□□□ -0.57
DDB1-213ENST00000539332 PHACTR3Q96KR7 559 aa11.49□□□□□ -0.57
DDB1-213ENST00000539332 PLCH1Q4KWH8 1693 aa11.48□□□□□ -0.57
DDB1-213ENST00000539332 COL5A2P05997 1499 aaPredicted RBP11.48□□□□□ -0.57
DDB1-213ENST00000539332 NUTM2BA6NNL0 878 aaPredicted RBP11.48□□□□□ -0.57
DDB1-213ENST00000539332 NUTM2EB1AL46 878 aaPredicted RBP11.48□□□□□ -0.57
DDB1-213ENST00000539332 RIPK4P57078 832 aa11.48□□□□□ -0.57
DDB1-213ENST00000539332 IRX6P78412 446 aaPredicted RBP11.48□□□□□ -0.57
DDB1-213ENST00000539332 NUTM2AQ8IVF1 878 aaPredicted RBP11.48□□□□□ -0.57
DDB1-213ENST00000539332 USHBP1Q8N6Y0 703 aa11.48□□□□□ -0.57
DDB1-213ENST00000539332 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
DDB1-213ENST00000539332 NEFMP07197 916 aa11.47□□□□□ -0.57
DDB1-213ENST00000539332 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
DDB1-213ENST00000539332 CSB-PGBD3P0DP91 1061 aa11.46□□□□□ -0.57
DDB1-213ENST00000539332 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.57
DDB1-213ENST00000539332 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.57
DDB1-213ENST00000539332 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.58
DDB1-213ENST00000539332 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.58
DDB1-213ENST00000539332 BTG4Q9NY30 223 aa11.46□□□□□ -0.58
DDB1-213ENST00000539332 SPATA31A6Q5VVP1 1343 aa11.45□□□□□ -0.58
DDB1-213ENST00000539332 NWD2Q9ULI1 1742 aa11.45□□□□□ -0.58
DDB1-213ENST00000539332 LMOD3Q0VAK6 560 aa11.45□□□□□ -0.58
DDB1-213ENST00000539332 NRAPQ86VF7 1730 aa11.45□□□□□ -0.58
DDB1-213ENST00000539332 EVA1CP58658 441 aa11.44□□□□□ -0.58
DDB1-213ENST00000539332 ZNF853P0CG23 659 aa11.44□□□□□ -0.58
DDB1-213ENST00000539332 STRN4Q9NRL3 753 aa11.44□□□□□ -0.58
DDB1-213ENST00000539332 LRP6O75581 1613 aa11.44□□□□□ -0.58
DDB1-213ENST00000539332 CALD1Q05682 793 aaKnown RBP11.43□□□□□ -0.58
DDB1-213ENST00000539332 LARP1Q6PKG0 1096 aaKnown RBP11.43□□□□□ -0.58
DDB1-213ENST00000539332 TOM1L2Q6ZVM7 507 aa11.43□□□□□ -0.58
DDB1-213ENST00000539332 ADAMTS7Q9UKP4 1686 aa11.43□□□□□ -0.58
DDB1-213ENST00000539332 SLIT2O94813 1529 aa11.42□□□□□ -0.58
DDB1-213ENST00000539332 CACNA1FO60840 1977 aa11.42□□□□□ -0.58
DDB1-213ENST00000539332 MTHFSDQ2M296 383 aaKnown RBP11.42□□□□□ -0.58
DDB1-213ENST00000539332 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
DDB1-213ENST00000539332 CRB1P82279 1406 aa11.42□□□□□ -0.58
DDB1-213ENST00000539332 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
DDB1-213ENST00000539332 IFT57Q9NWB7 429 aa11.41□□□□□ -0.58
DDB1-213ENST00000539332 MEGF6O75095 1541 aa11.41□□□□□ -0.58
DDB1-213ENST00000539332 PLEKHG2Q9H7P9 1386 aa11.41□□□□□ -0.58
DDB1-213ENST00000539332 PARP4Q9UKK3 1724 aaKnown RBP11.41□□□□□ -0.58
DDB1-213ENST00000539332 SIPA1L3O60292 1781 aaPredicted RBP11.41□□□□□ -0.58
DDB1-213ENST00000539332 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.41□□□□□ -0.58
DDB1-213ENST00000539332 GAS2L2Q8NHY3 880 aa11.41□□□□□ -0.58
DDB1-213ENST00000539332 RAPGEF4Q8WZA2 1011 aa11.41□□□□□ -0.58
DDB1-213ENST00000539332 PKD1L3Q7Z443 1732 aa11.4□□□□□ -0.58
DDB1-213ENST00000539332 TSR2Q969E8 191 aaKnown RBP11.4□□□□□ -0.58
DDB1-213ENST00000539332 NGLY1Q96IV0 654 aa11.4□□□□□ -0.58
DDB1-213ENST00000539332 C8orf37Q96NL8 207 aa11.4□□□□□ -0.58
DDB1-213ENST00000539332 KDM3BQ7LBC6 1761 aa11.4□□□□□ -0.58
DDB1-213ENST00000539332 PLIN1O60240 522 aa11.39□□□□□ -0.59
DDB1-213ENST00000539332 GNAI1P63096 354 aa11.39□□□□□ -0.59
DDB1-213ENST00000539332 AMOTQ4VCS5 1084 aa11.39□□□□□ -0.59
DDB1-213ENST00000539332 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
DDB1-213ENST00000539332 WNK3Q9BYP7 1800 aa11.39□□□□□ -0.59
DDB1-213ENST00000539332 HTATSF1O43719 755 aaKnown RBP11.39□□□□□ -0.59
DDB1-213ENST00000539332 BCAR3O75815 825 aa11.39□□□□□ -0.59
DDB1-213ENST00000539332 DEKP35659 375 aaKnown RBP11.39□□□□□ -0.59
DDB1-213ENST00000539332 EXOSC9Q06265 439 aaKnown RBP11.39□□□□□ -0.59
DDB1-213ENST00000539332 PLEKHO1Q53GL0 409 aaPredicted RBP11.39□□□□□ -0.59
DDB1-213ENST00000539332 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.38□□□□□ -0.59
DDB1-213ENST00000539332 SCN11AQ9UI33 1791 aa11.38□□□□□ -0.59
DDB1-213ENST00000539332 OVOS2A0A0G2JMS6 1433 aa11.38□□□□□ -0.59
DDB1-213ENST00000539332 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
DDB1-213ENST00000539332 TATP17735 454 aaPredicted RBP11.38□□□□□ -0.59
DDB1-213ENST00000539332 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
DDB1-213ENST00000539332 EXOC6Q8TAG9 804 aa11.38□□□□□ -0.59
DDB1-213ENST00000539332 ZNF428Q96B54 188 aa11.38□□□□□ -0.59
DDB1-213ENST00000539332 THUMPD2Q9BTF0 503 aaKnown RBP11.38□□□□□ -0.59
DDB1-213ENST00000539332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDB1-213ENST00000539332 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
DDB1-213ENST00000539332 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 PDE3AQ14432 1141 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 C20orf194Q5TEA3 1177 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 UNC5CLQ8IV45 518 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 FBXO41Q8TF61 875 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 NOP58Q9Y2X3 529 aaKnown RBP11.37□□□□□ -0.59
DDB1-213ENST00000539332 MAP3K5Q99683 1374 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 SHANK3Q9BYB0 1731 aa11.37□□□□□ -0.59
DDB1-213ENST00000539332 IL2RBP14784 551 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
DDB1-213ENST00000539332 DCTN1Q14203 1278 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 MEX3CQ5U5Q3 659 aaKnown RBP11.36□□□□□ -0.59
DDB1-213ENST00000539332 ZNF530Q6P9A1 599 aaPredicted RBP11.36□□□□□ -0.59
DDB1-213ENST00000539332 MBIPQ9NS73 344 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 CHL1O00533 1208 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 ALDH1L2Q3SY69 923 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 SPATA31A1Q5TZJ5 1347 aa11.36□□□□□ -0.59
DDB1-213ENST00000539332 MCM10Q7L590 875 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms