RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 MAP3K5Q99683 1374 aa26.2■■□□□ 1.78
LINC00943-205ENST00000539315 FAM208AQ9UK61 1670 aaKnown RBP26.19■■□□□ 1.78
LINC00943-205ENST00000539315 COG3Q96JB2 828 aa26.19■■□□□ 1.78
LINC00943-205ENST00000539315 RGPD2P0DJD1 1756 aa26.19■■□□□ 1.78
LINC00943-205ENST00000539315 PRIM1P49642 420 aaKnown RBP26.18■■□□□ 1.78
LINC00943-205ENST00000539315 KCNQ4P56696 695 aa26.18■■□□□ 1.78
LINC00943-205ENST00000539315 CDCA8Q53HL2 280 aa26.18■■□□□ 1.78
LINC00943-205ENST00000539315 PNPLA7Q6ZV29 1317 aa26.16■■□□□ 1.78
LINC00943-205ENST00000539315 NSD2O96028 1365 aa26.16■■□□□ 1.78
LINC00943-205ENST00000539315 GOLGB1Q14789 3259 aaKnown RBP26.16■■□□□ 1.78
LINC00943-205ENST00000539315 QSER1Q2KHR3 1735 aa26.16■■□□□ 1.78
LINC00943-205ENST00000539315 AMPHP49418 695 aa26.15■■□□□ 1.78
LINC00943-205ENST00000539315 SLC16A10Q8TF71 515 aa26.15■■□□□ 1.78
LINC00943-205ENST00000539315 SHANK3Q9BYB0 1731 aa26.14■■□□□ 1.78
LINC00943-205ENST00000539315 TUBGCP6Q96RT7 1819 aa26.14■■□□□ 1.78
LINC00943-205ENST00000539315 ZCRB1Q8TBF4 217 aaKnown RBP26.14■■□□□ 1.78
LINC00943-205ENST00000539315 SYTL4Q96C24 671 aaPredicted RBP26.14■■□□□ 1.78
LINC00943-205ENST00000539315 ANKRD36BQ8N2N9 1353 aa26.14■■□□□ 1.78
LINC00943-205ENST00000539315 COL24A1Q17RW2 1714 aa26.14■■□□□ 1.77
LINC00943-205ENST00000539315 MEGF6O75095 1541 aa26.13■■□□□ 1.77
LINC00943-205ENST00000539315 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
LINC00943-205ENST00000539315 LY75O60449 1722 aa26.11■■□□□ 1.77
LINC00943-205ENST00000539315 NBPF6Q5VWK0 638 aa26.11■■□□□ 1.77
LINC00943-205ENST00000539315 NBPF4Q96M43 638 aa26.11■■□□□ 1.77
LINC00943-205ENST00000539315 FYB1O15117 783 aa26.1■■□□□ 1.77
LINC00943-205ENST00000539315 RRS1Q15050 365 aaKnown RBP26.1■■□□□ 1.77
LINC00943-205ENST00000539315 TFCP2L1Q9NZI6 479 aa26.1■■□□□ 1.77
LINC00943-205ENST00000539315 POLR3GLQ9BT43 218 aa26.08■■□□□ 1.77
LINC00943-205ENST00000539315 GGNBP2Q9H3C7 697 aa26.08■■□□□ 1.77
LINC00943-205ENST00000539315 USHBP1Q8N6Y0 703 aa26.07■■□□□ 1.76
LINC00943-205ENST00000539315 RTL1A6NKG5 1358 aa26.07■■□□□ 1.76
LINC00943-205ENST00000539315 POLD1P28340 1107 aa26.06■■□□□ 1.76
LINC00943-205ENST00000539315 GPR162Q16538 588 aa26.06■■□□□ 1.76
LINC00943-205ENST00000539315 KIF7Q2M1P5 1343 aa26.06■■□□□ 1.76
LINC00943-205ENST00000539315 WASHC2AQ641Q2 1341 aa26.06■■□□□ 1.76
LINC00943-205ENST00000539315 CCNL1Q9UK58 526 aaPredicted RBP26.05■■□□□ 1.76
LINC00943-205ENST00000539315 KLHL34Q8N239 644 aa26.04■■□□□ 1.76
LINC00943-205ENST00000539315 NLGN2Q8NFZ4 835 aa26.03■■□□□ 1.76
LINC00943-205ENST00000539315 CGNL1Q0VF96 1302 aa26.01■■□□□ 1.75
LINC00943-205ENST00000539315 HSP90AB2PQ58FF8 381 aa26.01■■□□□ 1.75
LINC00943-205ENST00000539315 COL23A1Q86Y22 540 aaPredicted RBP26.01■■□□□ 1.75
LINC00943-205ENST00000539315 RAPGEF4Q8WZA2 1011 aa25.99■■□□□ 1.75
LINC00943-205ENST00000539315 INSRP06213 1382 aa25.98■■□□□ 1.75
LINC00943-205ENST00000539315 TATP17735 454 aaPredicted RBP25.97■■□□□ 1.75
LINC00943-205ENST00000539315 C1QTNF8P60827 252 aa25.97■■□□□ 1.75
LINC00943-205ENST00000539315 PELP1Q8IZL8 1130 aaKnown RBP25.97■■□□□ 1.75
LINC00943-205ENST00000539315 MSH5O43196 834 aa25.95■■□□□ 1.74
LINC00943-205ENST00000539315 DDX10Q13206 875 aaKnown RBP25.95■■□□□ 1.74
LINC00943-205ENST00000539315 CARD14Q9BXL6 1004 aa25.95■■□□□ 1.74
LINC00943-205ENST00000539315 SMG6Q86US8 1419 aaKnown RBP25.95■■□□□ 1.74
LINC00943-205ENST00000539315 CYP27B1O15528 508 aa25.94■■□□□ 1.74
LINC00943-205ENST00000539315 YBX3P16989 372 aaKnown RBP eCLIP25.93■■□□□ 1.74
LINC00943-205ENST00000539315 MSL1Q68DK7 614 aa25.93■■□□□ 1.74
LINC00943-205ENST00000539315 FLT4P35916 1363 aa25.93■■□□□ 1.74
LINC00943-205ENST00000539315 KIF20BQ96Q89 1820 aa25.93■■□□□ 1.74
LINC00943-205ENST00000539315 PCDH11XQ9BZA7 1347 aa25.92■■□□□ 1.74
LINC00943-205ENST00000539315 PCDH11YQ9BZA8 1340 aa25.92■■□□□ 1.74
LINC00943-205ENST00000539315 TAF1LQ8IZX4 1826 aa25.91■■□□□ 1.74
LINC00943-205ENST00000539315 KIF24Q5T7B8 1368 aa25.91■■□□□ 1.74
LINC00943-205ENST00000539315 C5P01031 1676 aa25.9■■□□□ 1.74
LINC00943-205ENST00000539315 MPRIPQ6WCQ1 1025 aa25.9■■□□□ 1.74
LINC00943-205ENST00000539315 EMILIN1Q9Y6C2 1016 aa25.9■■□□□ 1.74
LINC00943-205ENST00000539315 PALLDQ8WX93 1383 aa25.9■■□□□ 1.74
LINC00943-205ENST00000539315 ITGB4P16144 1822 aa25.89■■□□□ 1.74
LINC00943-205ENST00000539315 SENP3-EIF4A1A0A087X0R7 540 aa25.89■■□□□ 1.74
LINC00943-205ENST00000539315 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
LINC00943-205ENST00000539315 AMIGO3Q86WK7 504 aa25.87■■□□□ 1.73
LINC00943-205ENST00000539315 GRIN3BO60391 1043 aa25.86■■□□□ 1.73
LINC00943-205ENST00000539315 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
LINC00943-205ENST00000539315 FLAD1Q8NFF5 587 aa25.85■■□□□ 1.73
LINC00943-205ENST00000539315 PIGBQ92521 554 aa25.85■■□□□ 1.73
LINC00943-205ENST00000539315 NSD3Q9BZ95 1437 aa25.85■■□□□ 1.73
LINC00943-205ENST00000539315 NKX1-1Q15270 411 aaPredicted RBP25.84■■□□□ 1.73
LINC00943-205ENST00000539315 SMIM5Q71RC9 77 aa25.84■■□□□ 1.73
LINC00943-205ENST00000539315 PKD1L3Q7Z443 1732 aa25.84■■□□□ 1.73
LINC00943-205ENST00000539315 PANK3Q9H999 370 aa25.84■■□□□ 1.73
LINC00943-205ENST00000539315 GIGYF1O75420 1035 aaPredicted RBP25.83■■□□□ 1.73
LINC00943-205ENST00000539315 CD2APQ9Y5K6 639 aa25.83■■□□□ 1.73
LINC00943-205ENST00000539315 SMARCC1Q92922 1105 aaPredicted RBP25.82■■□□□ 1.72
LINC00943-205ENST00000539315 C4BP0C0L5 1744 aa25.82■■□□□ 1.72
LINC00943-205ENST00000539315 MAP2P11137 1827 aaKnown RBP25.81■■□□□ 1.72
LINC00943-205ENST00000539315 CEP350Q5VT06 3117 aa25.81■■□□□ 1.72
LINC00943-205ENST00000539315 EYA1Q99502 592 aa25.8■■□□□ 1.72
LINC00943-205ENST00000539315 UBR3Q6ZT12 1888 aa25.8■■□□□ 1.72
LINC00943-205ENST00000539315 PPM1GO15355 546 aaPredicted RBP25.79■■□□□ 1.72
LINC00943-205ENST00000539315 HMGB2P26583 209 aaKnown RBP25.79■■□□□ 1.72
LINC00943-205ENST00000539315 DIEXFQ68CQ4 756 aaKnown RBP25.79■■□□□ 1.72
LINC00943-205ENST00000539315 AK7Q96M32 723 aa25.78■■□□□ 1.72
LINC00943-205ENST00000539315 ANKRD26Q9UPS8 1709 aa25.77■■□□□ 1.72
LINC00943-205ENST00000539315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.76■■□□□ 1.71
LINC00943-205ENST00000539315 PHF14O94880 888 aa25.76■■□□□ 1.71
LINC00943-205ENST00000539315 LINC00116Q8NCU8 138 aa25.76■■□□□ 1.71
LINC00943-205ENST00000539315 POLKQ9UBT6 870 aa25.76■■□□□ 1.71
LINC00943-205ENST00000539315 SPG7Q9UQ90 795 aa25.76■■□□□ 1.71
LINC00943-205ENST00000539315 KNSTRNQ9Y448 316 aa25.76■■□□□ 1.71
LINC00943-205ENST00000539315 LOC102724428A0A0B4J2F2 783 aa25.75■■□□□ 1.71
LINC00943-205ENST00000539315 SIK1P57059 783 aa25.75■■□□□ 1.71
LINC00943-205ENST00000539315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.75■■□□□ 1.71
LINC00943-205ENST00000539315 ASAP1Q9ULH1 1129 aa25.74■■□□□ 1.71
LINC00943-205ENST00000539315 ITPK1Q13572 414 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms