RNA–Protein interactions for RNA: ENST00000539170.5

GABARAPL1-205, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3 BASIC

Gene GABARAPL1, Length 1,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-205ENST00000539170 MCM10Q7L590 875 aa21.52■■□□□ 1.03
GABARAPL1-205ENST00000539170 USHBP1Q8N6Y0 703 aa21.52■■□□□ 1.03
GABARAPL1-205ENST00000539170 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 PLEKHG5O94827 1062 aa21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 RTF1Q92541 710 aaKnown RBP21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 ERBB3P21860 1342 aa21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 MAP3K5Q99683 1374 aa21.51■■□□□ 1.03
GABARAPL1-205ENST00000539170 CHL1O00533 1208 aa21.5■■□□□ 1.03
GABARAPL1-205ENST00000539170 SSH1Q8WYL5 1049 aa21.5■■□□□ 1.03
GABARAPL1-205ENST00000539170 LRRC59Q96AG4 307 aaKnown RBP21.5■■□□□ 1.03
GABARAPL1-205ENST00000539170 BCL2L13Q9BXK5 485 aa21.5■■□□□ 1.03
GABARAPL1-205ENST00000539170 SMC4Q9NTJ3 1288 aa21.5■■□□□ 1.03
GABARAPL1-205ENST00000539170 FRAT1Q92837 279 aaPredicted RBP21.49■■□□□ 1.03
GABARAPL1-205ENST00000539170 GNAT3A8MTJ3 354 aa21.49■■□□□ 1.03
GABARAPL1-205ENST00000539170 BRPF1P55201 1214 aaPredicted RBP21.49■■□□□ 1.03
GABARAPL1-205ENST00000539170 VAMP4O75379 141 aa21.48■■□□□ 1.03
GABARAPL1-205ENST00000539170 KIF16BQ96L93 1317 aa21.47■■□□□ 1.03
GABARAPL1-205ENST00000539170 ZKSCAN2Q63HK3 967 aa21.47■■□□□ 1.03
GABARAPL1-205ENST00000539170 CABLES1Q8TDN4 633 aa21.47■■□□□ 1.03
GABARAPL1-205ENST00000539170 KIAA0232Q92628 1395 aa21.47■■□□□ 1.03
GABARAPL1-205ENST00000539170 MS4A1P11836 297 aa21.46■■□□□ 1.03
GABARAPL1-205ENST00000539170 TWISTNBQ3B726 338 aaPredicted RBP21.45■■□□□ 1.02
GABARAPL1-205ENST00000539170 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
GABARAPL1-205ENST00000539170 PANK1Q8TE04 598 aa21.45■■□□□ 1.02
GABARAPL1-205ENST00000539170 PLEKHG2Q9H7P9 1386 aa21.44■■□□□ 1.02
GABARAPL1-205ENST00000539170 ROBO1Q9Y6N7 1651 aa21.44■■□□□ 1.02
GABARAPL1-205ENST00000539170 AAMPQ13685 434 aa21.43■■□□□ 1.02
GABARAPL1-205ENST00000539170 AMOTQ4VCS5 1084 aa21.43■■□□□ 1.02
GABARAPL1-205ENST00000539170 C8orf58Q8NAV2 365 aa21.43■■□□□ 1.02
GABARAPL1-205ENST00000539170 AHDC1Q5TGY3 1603 aaPredicted RBP21.43■■□□□ 1.02
GABARAPL1-205ENST00000539170 RLBP1P12271 317 aa21.42■■□□□ 1.02
GABARAPL1-205ENST00000539170 HAP1P54257 671 aaPredicted RBP21.42■■□□□ 1.02
GABARAPL1-205ENST00000539170 PLEKHO1Q53GL0 409 aaPredicted RBP21.42■■□□□ 1.02
GABARAPL1-205ENST00000539170 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
GABARAPL1-205ENST00000539170 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
GABARAPL1-205ENST00000539170 CEMIPQ8WUJ3 1361 aa21.42■■□□□ 1.02
GABARAPL1-205ENST00000539170 ATF7IPQ6VMQ6 1270 aa21.41■■□□□ 1.02
GABARAPL1-205ENST00000539170 BABAM1Q9NWV8 329 aa21.41■■□□□ 1.02
GABARAPL1-205ENST00000539170 IPO8O15397 1037 aaKnown RBP21.41■■□□□ 1.02
GABARAPL1-205ENST00000539170 DZIP1LQ8IYY4 767 aaKnown RBP21.41■■□□□ 1.02
GABARAPL1-205ENST00000539170 MRPL50Q8N5N7 158 aaKnown RBP21.41■■□□□ 1.02
GABARAPL1-205ENST00000539170 IL17REQ8NFR9 667 aa21.41■■□□□ 1.02
GABARAPL1-205ENST00000539170 OVOS2A0A0G2JMS6 1433 aa21.4■■□□□ 1.02
GABARAPL1-205ENST00000539170 VIRMAQ69YN4 1812 aaKnown RBP21.4■■□□□ 1.02
GABARAPL1-205ENST00000539170 TRIM27P14373 513 aa21.4■■□□□ 1.02
GABARAPL1-205ENST00000539170 TSPYL4Q9UJ04 414 aa21.4■■□□□ 1.02
GABARAPL1-205ENST00000539170 NOB1Q9ULX3 412 aaKnown RBP21.4■■□□□ 1.02
GABARAPL1-205ENST00000539170 ADAMTS7Q9UKP4 1686 aa21.39■■□□□ 1.01
GABARAPL1-205ENST00000539170 AKAP4Q5JQC9 854 aa21.39■■□□□ 1.01
GABARAPL1-205ENST00000539170 CHRNA2Q15822 529 aa21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 FTSJ3Q8IY81 847 aaKnown RBP21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 KDM2BQ8NHM5 1336 aa21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 MVPQ14764 893 aaKnown RBP21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 ZNF530Q6P9A1 599 aaPredicted RBP21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 ARHGAP45Q92619 1136 aa21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 CLUAP1Q96AJ1 413 aa21.38■■□□□ 1.01
GABARAPL1-205ENST00000539170 ELL2O00472 640 aaPredicted RBP21.37■■□□□ 1.01
GABARAPL1-205ENST00000539170 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
GABARAPL1-205ENST00000539170 TSHZ2Q9NRE2 1034 aa21.36■■□□□ 1.01
GABARAPL1-205ENST00000539170 NLRP2Q9NX02 1062 aa21.36■■□□□ 1.01
GABARAPL1-205ENST00000539170 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
GABARAPL1-205ENST00000539170 PKD1L3Q7Z443 1732 aa21.36■■□□□ 1.01
GABARAPL1-205ENST00000539170 TAF7Q15545 349 aaPredicted RBP21.35■■□□□ 1.01
GABARAPL1-205ENST00000539170 PRDM11Q9NQV5 511 aa21.35■■□□□ 1.01
GABARAPL1-205ENST00000539170 CENPQQ7L2Z9 268 aaPredicted RBP21.35■■□□□ 1.01
GABARAPL1-205ENST00000539170 MEGF6O75095 1541 aa21.34■■□□□ 1.01
GABARAPL1-205ENST00000539170 COL5A2P05997 1499 aaPredicted RBP21.34■■□□□ 1.01
GABARAPL1-205ENST00000539170 KRT24Q2M2I5 525 aa21.34■■□□□ 1.01
GABARAPL1-205ENST00000539170 MIS18AQ9NYP9 233 aa21.34■■□□□ 1.01
GABARAPL1-205ENST00000539170 SOS1Q07889 1333 aaPredicted RBP21.34■■□□□ 1.01
GABARAPL1-205ENST00000539170 CSB-PGBD3P0DP91 1061 aa21.33■■□□□ 1.01
GABARAPL1-205ENST00000539170 C1orf141Q5JVX7 400 aa21.33■■□□□ 1.01
GABARAPL1-205ENST00000539170 RAPGEF4Q8WZA2 1011 aa21.33■■□□□ 1.01
GABARAPL1-205ENST00000539170 SIPA1L3O60292 1781 aaPredicted RBP21.33■■□□□ 1
GABARAPL1-205ENST00000539170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 1
GABARAPL1-205ENST00000539170 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
GABARAPL1-205ENST00000539170 DDX19BQ9UMR2 479 aa21.32■■□□□ 1
GABARAPL1-205ENST00000539170 WDR17Q8IZU2 1322 aa21.32■■□□□ 1
GABARAPL1-205ENST00000539170 PARP4Q9UKK3 1724 aaKnown RBP21.31■■□□□ 1
GABARAPL1-205ENST00000539170 LGR6Q9HBX8 967 aa21.31■■□□□ 1
GABARAPL1-205ENST00000539170 RNMTO43148 476 aaKnown RBP21.3■■□□□ 1
GABARAPL1-205ENST00000539170 SCN11AQ9UI33 1791 aa21.3■■□□□ 1
GABARAPL1-205ENST00000539170 ABCC4O15439 1325 aa21.29■■□□□ 1
GABARAPL1-205ENST00000539170 TMEM57Q8N5G2 664 aa21.29■■□□□ 1
GABARAPL1-205ENST00000539170 UBAP1LF5GYI3 381 aa21.28■■□□□ 1
GABARAPL1-205ENST00000539170 API5Q9BZZ5 524 aaKnown RBP21.28■■□□□ 1
GABARAPL1-205ENST00000539170 SPG7Q9UQ90 795 aa21.28■■□□□ 1
GABARAPL1-205ENST00000539170 CACNA1FO60840 1977 aa21.28■■□□□ 1
GABARAPL1-205ENST00000539170 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
GABARAPL1-205ENST00000539170 MPRIPQ6WCQ1 1025 aa21.27■■□□□ 1
GABARAPL1-205ENST00000539170 ITPRIPQ8IWB1 547 aa21.27■■□□□ 1
GABARAPL1-205ENST00000539170 COL16A1Q07092 1604 aaPredicted RBP21.27■■□□□ 1
GABARAPL1-205ENST00000539170 COL14A1Q05707 1796 aaKnown RBP21.27■■□□□ 1
GABARAPL1-205ENST00000539170 PHLPP1O60346 1717 aa21.27■■□□□ 1
GABARAPL1-205ENST00000539170 TEFQ10587 303 aa21.26■□□□□ 0.99
GABARAPL1-205ENST00000539170 RGS12O14924 1447 aa21.26■□□□□ 0.99
GABARAPL1-205ENST00000539170 PTPRCP08575 1304 aa21.25■□□□□ 0.99
GABARAPL1-205ENST00000539170 MRC1P22897 1456 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms