RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NLRP2Q9NX02 1062 aa18.66■□□□□ 0.58
CD4-208ENST00000538827 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
CD4-208ENST00000538827 R3HDM1Q15032 1099 aaKnown RBP18.65■□□□□ 0.58
CD4-208ENST00000538827 NBPF6Q5VWK0 638 aa18.65■□□□□ 0.58
CD4-208ENST00000538827 NBPF4Q96M43 638 aa18.65■□□□□ 0.58
CD4-208ENST00000538827 PLEKHF1Q96S99 279 aa18.65■□□□□ 0.58
CD4-208ENST00000538827 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
CD4-208ENST00000538827 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
CD4-208ENST00000538827 KDRP35968 1356 aa18.64■□□□□ 0.57
CD4-208ENST00000538827 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
CD4-208ENST00000538827 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
CD4-208ENST00000538827 EVA1CP58658 441 aa18.63■□□□□ 0.57
CD4-208ENST00000538827 BTG4Q9NY30 223 aa18.63■□□□□ 0.57
CD4-208ENST00000538827 WDR17Q8IZU2 1322 aa18.63■□□□□ 0.57
CD4-208ENST00000538827 NCAPD2Q15021 1401 aa18.63■□□□□ 0.57
CD4-208ENST00000538827 WNK3Q9BYP7 1800 aa18.63■□□□□ 0.57
CD4-208ENST00000538827 EN1Q05925 392 aaPredicted RBP18.62■□□□□ 0.57
CD4-208ENST00000538827 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
CD4-208ENST00000538827 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
CD4-208ENST00000538827 CCDC9Q9Y3X0 531 aaKnown RBP18.61■□□□□ 0.57
CD4-208ENST00000538827 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
CD4-208ENST00000538827 LARP1Q6PKG0 1096 aaKnown RBP18.59■□□□□ 0.57
CD4-208ENST00000538827 PHACTR3Q96KR7 559 aa18.59■□□□□ 0.57
CD4-208ENST00000538827 CRB1P82279 1406 aa18.58■□□□□ 0.57
CD4-208ENST00000538827 NFE2L2Q16236 605 aa18.58■□□□□ 0.56
CD4-208ENST00000538827 MEGF6O75095 1541 aa18.58■□□□□ 0.56
CD4-208ENST00000538827 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
CD4-208ENST00000538827 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
CD4-208ENST00000538827 DISP2A7MBM2 1401 aa18.57■□□□□ 0.56
CD4-208ENST00000538827 A0A0G2JS52 829 aa18.56■□□□□ 0.56
CD4-208ENST00000538827 RIPK4P57078 832 aa18.56■□□□□ 0.56
CD4-208ENST00000538827 MYT1Q01538 1121 aa18.56■□□□□ 0.56
CD4-208ENST00000538827 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
CD4-208ENST00000538827 TATP17735 454 aaPredicted RBP18.55■□□□□ 0.56
CD4-208ENST00000538827 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
CD4-208ENST00000538827 GAS2L2Q8NHY3 880 aa18.55■□□□□ 0.56
CD4-208ENST00000538827 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
CD4-208ENST00000538827 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
CD4-208ENST00000538827 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
CD4-208ENST00000538827 MTHFSDQ2M296 383 aaKnown RBP18.53■□□□□ 0.56
CD4-208ENST00000538827 IFFO2Q5TF58 517 aa18.53■□□□□ 0.56
CD4-208ENST00000538827 PLEKHO1Q53GL0 409 aaPredicted RBP18.52■□□□□ 0.56
CD4-208ENST00000538827 OVOS2A0A0G2JMS6 1433 aa18.51■□□□□ 0.55
CD4-208ENST00000538827 FAM98CQ17RN3 349 aaKnown RBP18.51■□□□□ 0.55
CD4-208ENST00000538827 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
CD4-208ENST00000538827 WWC1Q8IX03 1113 aa18.51■□□□□ 0.55
CD4-208ENST00000538827 LRRC37A3O60309 1634 aa18.51■□□□□ 0.55
CD4-208ENST00000538827 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
CD4-208ENST00000538827 SHANK3Q9BYB0 1731 aa18.51■□□□□ 0.55
CD4-208ENST00000538827 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
CD4-208ENST00000538827 EZH2Q15910 746 aaKnown RBP18.5■□□□□ 0.55
CD4-208ENST00000538827 CCDC27Q2M243 656 aa18.5■□□□□ 0.55
CD4-208ENST00000538827 TRIM35Q9UPQ4 493 aa18.5■□□□□ 0.55
CD4-208ENST00000538827 GOLGA2Q08379 1002 aa18.49■□□□□ 0.55
CD4-208ENST00000538827 AMOTQ4VCS5 1084 aa18.49■□□□□ 0.55
CD4-208ENST00000538827 CAMKK2Q96RR4 588 aa18.49■□□□□ 0.55
CD4-208ENST00000538827 IL2RBP14784 551 aa18.48■□□□□ 0.55
CD4-208ENST00000538827 PDE3BQ13370 1112 aa18.48■□□□□ 0.55
CD4-208ENST00000538827 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
CD4-208ENST00000538827 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
CD4-208ENST00000538827 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
CD4-208ENST00000538827 CDCA7LQ96GN5 454 aa18.48■□□□□ 0.55
CD4-208ENST00000538827 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
CD4-208ENST00000538827 PLEKHG2Q9H7P9 1386 aa18.47■□□□□ 0.55
CD4-208ENST00000538827 DCTN1Q14203 1278 aa18.47■□□□□ 0.55
CD4-208ENST00000538827 PPP1R1BQ9UD71 204 aaPredicted RBP18.47■□□□□ 0.55
CD4-208ENST00000538827 SPG7Q9UQ90 795 aa18.47■□□□□ 0.55
CD4-208ENST00000538827 SPATA31A1Q5TZJ5 1347 aa18.47■□□□□ 0.55
CD4-208ENST00000538827 GNAT3A8MTJ3 354 aa18.46■□□□□ 0.55
CD4-208ENST00000538827 NBPF14Q5TI25 921 aa18.45■□□□□ 0.54
CD4-208ENST00000538827 MCM10Q7L590 875 aa18.45■□□□□ 0.54
CD4-208ENST00000538827 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
CD4-208ENST00000538827 SPATA31A5Q5VU36 1347 aa18.45■□□□□ 0.54
CD4-208ENST00000538827 SPATA31A7Q8IWB4 1347 aa18.45■□□□□ 0.54
CD4-208ENST00000538827 SCN11AQ9UI33 1791 aa18.45■□□□□ 0.54
CD4-208ENST00000538827 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
CD4-208ENST00000538827 AKAP4Q5JQC9 854 aa18.44■□□□□ 0.54
CD4-208ENST00000538827 SPON1Q9HCB6 807 aa18.44■□□□□ 0.54
CD4-208ENST00000538827 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
CD4-208ENST00000538827 E9PSI1 815 aa18.43■□□□□ 0.54
CD4-208ENST00000538827 FAM182BQ5T319 152 aa18.43■□□□□ 0.54
CD4-208ENST00000538827 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
CD4-208ENST00000538827 PCDH11XQ9BZA7 1347 aa18.43■□□□□ 0.54
CD4-208ENST00000538827 PCDH11YQ9BZA8 1340 aa18.43■□□□□ 0.54
CD4-208ENST00000538827 TNS2Q63HR2 1409 aa18.42■□□□□ 0.54
CD4-208ENST00000538827 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
CD4-208ENST00000538827 ZCRB1Q8TBF4 217 aaKnown RBP18.42■□□□□ 0.54
CD4-208ENST00000538827 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
CD4-208ENST00000538827 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
CD4-208ENST00000538827 APBA3O96018 575 aa18.41■□□□□ 0.54
CD4-208ENST00000538827 MYH16Q9H6N6 1097 aa18.41■□□□□ 0.54
CD4-208ENST00000538827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.41■□□□□ 0.54
CD4-208ENST00000538827 THRAP3Q9Y2W1 955 aaKnown RBP18.41■□□□□ 0.54
CD4-208ENST00000538827 IL16Q14005 1332 aa18.41■□□□□ 0.54
CD4-208ENST00000538827 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
CD4-208ENST00000538827 KCNQ2O43526 872 aa18.4■□□□□ 0.54
CD4-208ENST00000538827 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
CD4-208ENST00000538827 PHKG2P15735 406 aa18.4■□□□□ 0.54
CD4-208ENST00000538827 IFNL2Q8IZJ0 200 aa18.4■□□□□ 0.54
CD4-208ENST00000538827 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms