RNA–Protein interactions for RNA: ENST00000538783.1

LINC02439-201, Transcript of long intergenic non-protein coding RNA 2439, humanhuman

TSL 3 BASIC

Gene LINC02439, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02439-201ENST00000538783 POLR3GLQ9BT43 218 aa13.15□□□□□ -0.3
LINC02439-201ENST00000538783 FHDC1Q9C0D6 1143 aaPredicted RBP13.15□□□□□ -0.3
LINC02439-201ENST00000538783 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
LINC02439-201ENST00000538783 HMGB2P26583 209 aaKnown RBP13.14□□□□□ -0.31
LINC02439-201ENST00000538783 POLD1P28340 1107 aa13.14□□□□□ -0.31
LINC02439-201ENST00000538783 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
LINC02439-201ENST00000538783 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
LINC02439-201ENST00000538783 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
LINC02439-201ENST00000538783 NHSQ6T4R5 1651 aa13.13□□□□□ -0.31
LINC02439-201ENST00000538783 FLT4P35916 1363 aa13.13□□□□□ -0.31
LINC02439-201ENST00000538783 SLC16A10Q8TF71 515 aa13.13□□□□□ -0.31
LINC02439-201ENST00000538783 CCNL1Q9UK58 526 aaPredicted RBP13.13□□□□□ -0.31
LINC02439-201ENST00000538783 INSRP06213 1382 aa13.12□□□□□ -0.31
LINC02439-201ENST00000538783 MSH5O43196 834 aa13.12□□□□□ -0.31
LINC02439-201ENST00000538783 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
LINC02439-201ENST00000538783 AKT1S1Q96B36 256 aa13.12□□□□□ -0.31
LINC02439-201ENST00000538783 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
LINC02439-201ENST00000538783 KAT6BQ8WYB5 2073 aa13.12□□□□□ -0.31
LINC02439-201ENST00000538783 KIF24Q5T7B8 1368 aa13.11□□□□□ -0.31
LINC02439-201ENST00000538783 KCNQ4P56696 695 aa13.11□□□□□ -0.31
LINC02439-201ENST00000538783 NSD3Q9BZ95 1437 aa13.11□□□□□ -0.31
LINC02439-201ENST00000538783 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
LINC02439-201ENST00000538783 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
LINC02439-201ENST00000538783 MEGF6O75095 1541 aa13.1□□□□□ -0.31
LINC02439-201ENST00000538783 SGIP1Q9BQI5 828 aa13.1□□□□□ -0.31
LINC02439-201ENST00000538783 EMILIN1Q9Y6C2 1016 aa13.1□□□□□ -0.31
LINC02439-201ENST00000538783 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
LINC02439-201ENST00000538783 MPRIPQ6WCQ1 1025 aa13.09□□□□□ -0.31
LINC02439-201ENST00000538783 CASZ1Q86V15 1759 aa13.09□□□□□ -0.31
LINC02439-201ENST00000538783 EIF4G2P78344 907 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC02439-201ENST00000538783 GPR162Q16538 588 aa13.08□□□□□ -0.32
LINC02439-201ENST00000538783 SPG7Q9UQ90 795 aa13.08□□□□□ -0.32
LINC02439-201ENST00000538783 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.32
LINC02439-201ENST00000538783 BTAF1O14981 1849 aa13.07□□□□□ -0.32
LINC02439-201ENST00000538783 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
LINC02439-201ENST00000538783 TNNT2P45379 298 aaPredicted RBP13.06□□□□□ -0.32
LINC02439-201ENST00000538783 PELP1Q8IZL8 1130 aaKnown RBP13.06□□□□□ -0.32
LINC02439-201ENST00000538783 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
LINC02439-201ENST00000538783 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
LINC02439-201ENST00000538783 WASHC2AQ641Q2 1341 aa13.06□□□□□ -0.32
LINC02439-201ENST00000538783 NSD2O96028 1365 aa13.06□□□□□ -0.32
LINC02439-201ENST00000538783 UTRNP46939 3433 aa13.06□□□□□ -0.32
LINC02439-201ENST00000538783 CYP27B1O15528 508 aa13.05□□□□□ -0.32
LINC02439-201ENST00000538783 MYOM1P52179 1685 aa13.05□□□□□ -0.32
LINC02439-201ENST00000538783 EYA1Q99502 592 aa13.04□□□□□ -0.32
LINC02439-201ENST00000538783 POLKQ9UBT6 870 aa13.04□□□□□ -0.32
LINC02439-201ENST00000538783 PALLDQ8WX93 1383 aa13.04□□□□□ -0.32
LINC02439-201ENST00000538783 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
LINC02439-201ENST00000538783 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
LINC02439-201ENST00000538783 AK7Q96M32 723 aa13.03□□□□□ -0.32
LINC02439-201ENST00000538783 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC02439-201ENST00000538783 PAPPAQ13219 1627 aa13.02□□□□□ -0.32
LINC02439-201ENST00000538783 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
LINC02439-201ENST00000538783 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.33
LINC02439-201ENST00000538783 PIGBQ92521 554 aa13.02□□□□□ -0.33
LINC02439-201ENST00000538783 PANK3Q9H999 370 aa13.02□□□□□ -0.33
LINC02439-201ENST00000538783 TMOD3Q9NYL9 352 aa13.02□□□□□ -0.33
LINC02439-201ENST00000538783 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
LINC02439-201ENST00000538783 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
LINC02439-201ENST00000538783 MORC1Q86VD1 984 aa13□□□□□ -0.33
LINC02439-201ENST00000538783 ZNF784Q8NCA9 323 aaPredicted RBP13□□□□□ -0.33
LINC02439-201ENST00000538783 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
LINC02439-201ENST00000538783 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
LINC02439-201ENST00000538783 PHKG2P15735 406 aa12.99□□□□□ -0.33
LINC02439-201ENST00000538783 EIF4A2Q14240 407 aaKnown RBP12.99□□□□□ -0.33
LINC02439-201ENST00000538783 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
LINC02439-201ENST00000538783 KIF20BQ96Q89 1820 aa12.99□□□□□ -0.33
LINC02439-201ENST00000538783 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
LINC02439-201ENST00000538783 PHF14O94880 888 aa12.98□□□□□ -0.33
LINC02439-201ENST00000538783 SIK1P57059 783 aa12.98□□□□□ -0.33
LINC02439-201ENST00000538783 PLEKHO1Q53GL0 409 aaPredicted RBP12.98□□□□□ -0.33
LINC02439-201ENST00000538783 RGPD2P0DJD1 1756 aa12.98□□□□□ -0.33
LINC02439-201ENST00000538783 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.97□□□□□ -0.33
LINC02439-201ENST00000538783 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
LINC02439-201ENST00000538783 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
LINC02439-201ENST00000538783 NLGN2Q8NFZ4 835 aa12.97□□□□□ -0.33
LINC02439-201ENST00000538783 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
LINC02439-201ENST00000538783 ASAP1Q9ULH1 1129 aa12.96□□□□□ -0.33
LINC02439-201ENST00000538783 CD2APQ9Y5K6 639 aa12.96□□□□□ -0.33
LINC02439-201ENST00000538783 NCAPD2Q15021 1401 aa12.96□□□□□ -0.34
LINC02439-201ENST00000538783 GNPATO15228 680 aa12.95□□□□□ -0.34
LINC02439-201ENST00000538783 SSFA2P28290 1259 aa12.95□□□□□ -0.34
LINC02439-201ENST00000538783 GOLGB1Q14789 3259 aaKnown RBP12.95□□□□□ -0.34
LINC02439-201ENST00000538783 LY75O60449 1722 aa12.94□□□□□ -0.34
LINC02439-201ENST00000538783 SHANK3Q9BYB0 1731 aa12.94□□□□□ -0.34
LINC02439-201ENST00000538783 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
LINC02439-201ENST00000538783 C1orf141Q5JVX7 400 aa12.94□□□□□ -0.34
LINC02439-201ENST00000538783 ZNF530Q6P9A1 599 aaPredicted RBP12.94□□□□□ -0.34
LINC02439-201ENST00000538783 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
LINC02439-201ENST00000538783 ATG3Q9NT62 314 aa12.94□□□□□ -0.34
LINC02439-201ENST00000538783 IGSF1Q8N6C5 1336 aa12.93□□□□□ -0.34
LINC02439-201ENST00000538783 MTHFSP49914 203 aa12.93□□□□□ -0.34
LINC02439-201ENST00000538783 CABP4P57796 275 aa12.93□□□□□ -0.34
LINC02439-201ENST00000538783 LINC00116Q8NCU8 138 aa12.93□□□□□ -0.34
LINC02439-201ENST00000538783 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
LINC02439-201ENST00000538783 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
LINC02439-201ENST00000538783 ITPK1Q13572 414 aa12.92□□□□□ -0.34
LINC02439-201ENST00000538783 TRAPPC3LQ5T215 181 aa12.92□□□□□ -0.34
LINC02439-201ENST00000538783 SMIM5Q71RC9 77 aa12.92□□□□□ -0.34
LINC02439-201ENST00000538783 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms