RNA–Protein interactions for RNA: ENST00000538653.1

BCAR3-209, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 2

Gene BCAR3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-209ENST00000538653 SRPK2P78362 688 aaKnown RBP8.96□□□□□ -0.98
BCAR3-209ENST00000538653 TMF1P82094 1093 aa8.96□□□□□ -0.98
BCAR3-209ENST00000538653 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
BCAR3-209ENST00000538653 ESCO1Q5FWF5 840 aa8.96□□□□□ -0.98
BCAR3-209ENST00000538653 NPHP3Q7Z494 1330 aa8.96□□□□□ -0.98
BCAR3-209ENST00000538653 NUTM2FA1L443 756 aa8.95□□□□□ -0.98
BCAR3-209ENST00000538653 HSPA5P11021 654 aaKnown RBP8.95□□□□□ -0.98
BCAR3-209ENST00000538653 MAP3K9P80192 1104 aa8.95□□□□□ -0.98
BCAR3-209ENST00000538653 NUDT16Q96DE0 195 aaKnown RBP8.95□□□□□ -0.98
BCAR3-209ENST00000538653 LARP6Q9BRS8 491 aaKnown RBP8.95□□□□□ -0.98
BCAR3-209ENST00000538653 PRR36Q9H6K5 1346 aa8.95□□□□□ -0.98
BCAR3-209ENST00000538653 NINLQ9Y2I6 1382 aa8.95□□□□□ -0.98
BCAR3-209ENST00000538653 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
BCAR3-209ENST00000538653 RGPD8O14715 1765 aaPredicted RBP8.94□□□□□ -0.98
BCAR3-209ENST00000538653 ORAI2Q96SN7 254 aa8.94□□□□□ -0.98
BCAR3-209ENST00000538653 PPIP5K1Q6PFW1 1433 aa8.94□□□□□ -0.98
BCAR3-209ENST00000538653 COL16A1Q07092 1604 aaPredicted RBP8.94□□□□□ -0.98
BCAR3-209ENST00000538653 ANKK1Q8NFD2 765 aa8.93□□□□□ -0.98
BCAR3-209ENST00000538653 POLR3AO14802 1390 aaPredicted RBP8.93□□□□□ -0.98
BCAR3-209ENST00000538653 DISP3Q9P2K9 1392 aa8.93□□□□□ -0.98
BCAR3-209ENST00000538653 PXDNQ92626 1479 aa8.93□□□□□ -0.98
BCAR3-209ENST00000538653 BRD4O60885 1362 aaPredicted RBP8.92□□□□□ -0.98
BCAR3-209ENST00000538653 SOS2Q07890 1332 aaPredicted RBP8.92□□□□□ -0.98
BCAR3-209ENST00000538653 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
BCAR3-209ENST00000538653 MFSD10Q14728 455 aa8.92□□□□□ -0.98
BCAR3-209ENST00000538653 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
BCAR3-209ENST00000538653 HSPA1LP34931 641 aa8.91□□□□□ -0.98
BCAR3-209ENST00000538653 PSME1Q06323 249 aa8.91□□□□□ -0.98
BCAR3-209ENST00000538653 NGDNQ8NEJ9 315 aaKnown RBP8.91□□□□□ -0.98
BCAR3-209ENST00000538653 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 JCADQ9P266 1359 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 ACEP12821 1306 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 FOXO3O43524 673 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 GTPBP6O43824 516 aaPredicted RBP8.9□□□□□ -0.98
BCAR3-209ENST00000538653 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 PMFBP1Q8TBY8 1022 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 LRRC59Q96AG4 307 aaKnown RBP8.9□□□□□ -0.98
BCAR3-209ENST00000538653 CABP1Q9NZU7 370 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 PCDHGA10Q9Y5H3 936 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 SHPRHQ149N8 1683 aa8.9□□□□□ -0.98
BCAR3-209ENST00000538653 TNS3Q68CZ2 1445 aa8.89□□□□□ -0.99
BCAR3-209ENST00000538653 AKAP12Q02952 1782 aa8.89□□□□□ -0.99
BCAR3-209ENST00000538653 TRPM3Q9HCF6 1732 aaPredicted RBP8.89□□□□□ -0.99
BCAR3-209ENST00000538653 ITGBL1O95965 494 aaPredicted RBP8.89□□□□□ -0.99
BCAR3-209ENST00000538653 FBXW7Q969H0 707 aa8.89□□□□□ -0.99
BCAR3-209ENST00000538653 EMILIN3Q9NT22 766 aa8.89□□□□□ -0.99
BCAR3-209ENST00000538653 TERF2IPQ9NYB0 399 aa8.89□□□□□ -0.99
BCAR3-209ENST00000538653 USP6P35125 1406 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 CPSF1Q10570 1443 aaKnown RBP8.88□□□□□ -0.99
BCAR3-209ENST00000538653 MON2Q7Z3U7 1717 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 ARHGEF10O15013 1369 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 MYOM1P52179 1685 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 COL9A1P20849 921 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 TYW1BQ6NUM6 668 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 KRT28Q7Z3Y7 464 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 HDGFL2Q7Z4V5 671 aaPredicted RBP8.88□□□□□ -0.99
BCAR3-209ENST00000538653 LAPTM4BQ86VI4 370 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 DDX17Q92841 729 aaKnown RBP8.88□□□□□ -0.99
BCAR3-209ENST00000538653 CD163L1Q9NR16 1453 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 ALS2Q96Q42 1657 aa8.88□□□□□ -0.99
BCAR3-209ENST00000538653 ANKRD36BQ8N2N9 1353 aa8.87□□□□□ -0.99
BCAR3-209ENST00000538653 COL22A1Q8NFW1 1626 aaPredicted RBP8.87□□□□□ -0.99
BCAR3-209ENST00000538653 NRKQ7Z2Y5 1582 aa8.87□□□□□ -0.99
BCAR3-209ENST00000538653 SPATA31A3Q5VYP0 1347 aa8.87□□□□□ -0.99
BCAR3-209ENST00000538653 BCAMP50895 628 aa8.87□□□□□ -0.99
BCAR3-209ENST00000538653 TMC1Q8TDI8 760 aa8.87□□□□□ -0.99
BCAR3-209ENST00000538653 EDC4Q6P2E9 1401 aaKnown RBP8.87□□□□□ -0.99
BCAR3-209ENST00000538653 A0A1W2PP64 1363 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 KTN1Q86UP2 1357 aaKnown RBP8.86□□□□□ -0.99
BCAR3-209ENST00000538653 PNPLA6Q8IY17 1366 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 MED1Q15648 1581 aaPredicted RBP8.86□□□□□ -0.99
BCAR3-209ENST00000538653 SPATA31A6Q5VVP1 1343 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 TTC21AQ8NDW8 1320 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 PHF14O94880 888 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 XPCQ01831 940 aaPredicted RBP8.86□□□□□ -0.99
BCAR3-209ENST00000538653 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
BCAR3-209ENST00000538653 KIF7Q2M1P5 1343 aa8.85□□□□□ -0.99
BCAR3-209ENST00000538653 SOWAHBA6NEL2 793 aa8.85□□□□□ -0.99
BCAR3-209ENST00000538653 SLC12A5Q9H2X9 1139 aa8.85□□□□□ -0.99
BCAR3-209ENST00000538653 RTN4Q9NQC3 1192 aaKnown RBP8.85□□□□□ -0.99
BCAR3-209ENST00000538653 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
BCAR3-209ENST00000538653 WASHC2AQ641Q2 1341 aa8.83□□□□□ -1
BCAR3-209ENST00000538653 TTC21BQ7Z4L5 1316 aa8.83□□□□□ -1
BCAR3-209ENST00000538653 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
BCAR3-209ENST00000538653 ZFRQ96KR1 1074 aaKnown RBP8.83□□□□□ -1
BCAR3-209ENST00000538653 POLR3GLQ9BT43 218 aa8.83□□□□□ -1
BCAR3-209ENST00000538653 PIK3C2AO00443 1686 aa8.83□□□□□ -1
BCAR3-209ENST00000538653 USP54Q70EL1 1684 aa8.83□□□□□ -1
BCAR3-209ENST00000538653 ABCA3Q99758 1704 aa8.83□□□□□ -1
BCAR3-209ENST00000538653 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
BCAR3-209ENST00000538653 ABTB2Q8N961 1025 aa8.82□□□□□ -1
BCAR3-209ENST00000538653 KIAA1468Q9P260 1216 aa8.82□□□□□ -1
BCAR3-209ENST00000538653 USP31Q70CQ4 1352 aa8.82□□□□□ -1
BCAR3-209ENST00000538653 CRYBG1Q9Y4K1 1723 aa8.82□□□□□ -1
BCAR3-209ENST00000538653 USP19O94966 1318 aa8.81□□□□□ -1
BCAR3-209ENST00000538653 NSD3Q9BZ95 1437 aa8.81□□□□□ -1
BCAR3-209ENST00000538653 PHRF1Q9P1Y6 1649 aaKnown RBP8.81□□□□□ -1
BCAR3-209ENST00000538653 ONECUT3O60422 494 aaPredicted RBP8.81□□□□□ -1
BCAR3-209ENST00000538653 NLRP13Q86W25 1043 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms