RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 EXOC5O00471 708 aa16.96■□□□□ 0.31
CDK2AP1-204ENST00000538446 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
CDK2AP1-204ENST00000538446 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
CDK2AP1-204ENST00000538446 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
CDK2AP1-204ENST00000538446 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
CDK2AP1-204ENST00000538446 PNNQ9H307 717 aaKnown RBP16.95■□□□□ 0.3
CDK2AP1-204ENST00000538446 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
CDK2AP1-204ENST00000538446 THSD7AQ9UPZ6 1657 aa16.94■□□□□ 0.3
CDK2AP1-204ENST00000538446 NEFMP07197 916 aa16.94■□□□□ 0.3
CDK2AP1-204ENST00000538446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.94■□□□□ 0.3
CDK2AP1-204ENST00000538446 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
CDK2AP1-204ENST00000538446 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
CDK2AP1-204ENST00000538446 AMOTQ4VCS5 1084 aa16.93■□□□□ 0.3
CDK2AP1-204ENST00000538446 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
CDK2AP1-204ENST00000538446 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
CDK2AP1-204ENST00000538446 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
CDK2AP1-204ENST00000538446 KRT27Q7Z3Y8 459 aa16.92■□□□□ 0.3
CDK2AP1-204ENST00000538446 PCDH11XQ9BZA7 1347 aa16.92■□□□□ 0.3
CDK2AP1-204ENST00000538446 PCDH11YQ9BZA8 1340 aa16.92■□□□□ 0.3
CDK2AP1-204ENST00000538446 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
CDK2AP1-204ENST00000538446 MAPK8IP3Q9UPT6 1336 aa16.91■□□□□ 0.3
CDK2AP1-204ENST00000538446 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
CDK2AP1-204ENST00000538446 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
CDK2AP1-204ENST00000538446 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
CDK2AP1-204ENST00000538446 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
CDK2AP1-204ENST00000538446 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
CDK2AP1-204ENST00000538446 FAM9BQ8IZU0 186 aa16.88■□□□□ 0.29
CDK2AP1-204ENST00000538446 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
CDK2AP1-204ENST00000538446 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
CDK2AP1-204ENST00000538446 PHACTR3Q96KR7 559 aa16.88■□□□□ 0.29
CDK2AP1-204ENST00000538446 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
CDK2AP1-204ENST00000538446 CYP27B1O15528 508 aa16.87■□□□□ 0.29
CDK2AP1-204ENST00000538446 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
CDK2AP1-204ENST00000538446 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
CDK2AP1-204ENST00000538446 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
CDK2AP1-204ENST00000538446 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
CDK2AP1-204ENST00000538446 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
CDK2AP1-204ENST00000538446 PHKG2P15735 406 aa16.85■□□□□ 0.29
CDK2AP1-204ENST00000538446 FAM182BQ5T319 152 aa16.85■□□□□ 0.29
CDK2AP1-204ENST00000538446 FAM196AQ6ZSG2 479 aa16.85■□□□□ 0.29
CDK2AP1-204ENST00000538446 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
CDK2AP1-204ENST00000538446 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
CDK2AP1-204ENST00000538446 MAP3K5Q99683 1374 aa16.82■□□□□ 0.28
CDK2AP1-204ENST00000538446 GNAT3A8MTJ3 354 aa16.82■□□□□ 0.28
CDK2AP1-204ENST00000538446 NKX1-1Q15270 411 aaPredicted RBP16.82■□□□□ 0.28
CDK2AP1-204ENST00000538446 NFE2L2Q16236 605 aa16.82■□□□□ 0.28
CDK2AP1-204ENST00000538446 DCAF5Q96JK2 942 aa16.82■□□□□ 0.28
CDK2AP1-204ENST00000538446 BCL9O00512 1426 aa16.81■□□□□ 0.28
CDK2AP1-204ENST00000538446 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
CDK2AP1-204ENST00000538446 APAF1O14727 1248 aa16.79■□□□□ 0.28
CDK2AP1-204ENST00000538446 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
CDK2AP1-204ENST00000538446 RIPK4P57078 832 aa16.79■□□□□ 0.28
CDK2AP1-204ENST00000538446 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
CDK2AP1-204ENST00000538446 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
CDK2AP1-204ENST00000538446 HTATSF1O43719 755 aaKnown RBP16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 SYTL4Q96C24 671 aaPredicted RBP16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 ACSBG1Q96GR2 724 aa16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 SHANK3Q9BYB0 1731 aa16.78■□□□□ 0.28
CDK2AP1-204ENST00000538446 BRWD3Q6RI45 1802 aa16.77■□□□□ 0.28
CDK2AP1-204ENST00000538446 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
CDK2AP1-204ENST00000538446 KDM6AO15550 1401 aaPredicted RBP16.77■□□□□ 0.27
CDK2AP1-204ENST00000538446 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
CDK2AP1-204ENST00000538446 PRIM1P49642 420 aaKnown RBP16.76■□□□□ 0.27
CDK2AP1-204ENST00000538446 TRIM37O94972 964 aa16.75■□□□□ 0.27
CDK2AP1-204ENST00000538446 CABP4P57796 275 aa16.75■□□□□ 0.27
CDK2AP1-204ENST00000538446 LGR6Q9HBX8 967 aa16.75■□□□□ 0.27
CDK2AP1-204ENST00000538446 TMOD3Q9NYL9 352 aa16.75■□□□□ 0.27
CDK2AP1-204ENST00000538446 KCNQ2O43526 872 aa16.74■□□□□ 0.27
CDK2AP1-204ENST00000538446 MCM10Q7L590 875 aa16.74■□□□□ 0.27
CDK2AP1-204ENST00000538446 IL17REQ8NFR9 667 aa16.74■□□□□ 0.27
CDK2AP1-204ENST00000538446 BCL11BQ9C0K0 894 aaPredicted RBP16.74■□□□□ 0.27
CDK2AP1-204ENST00000538446 TEFQ10587 303 aa16.73■□□□□ 0.27
CDK2AP1-204ENST00000538446 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
CDK2AP1-204ENST00000538446 CEMIPQ8WUJ3 1361 aa16.73■□□□□ 0.27
CDK2AP1-204ENST00000538446 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
CDK2AP1-204ENST00000538446 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
CDK2AP1-204ENST00000538446 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
CDK2AP1-204ENST00000538446 SENP3-EIF4A1A0A087X0R7 540 aa16.71■□□□□ 0.27
CDK2AP1-204ENST00000538446 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
CDK2AP1-204ENST00000538446 NFATC2IPQ8NCF5 419 aa16.71■□□□□ 0.27
CDK2AP1-204ENST00000538446 TRIM35Q9UPQ4 493 aa16.71■□□□□ 0.27
CDK2AP1-204ENST00000538446 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
CDK2AP1-204ENST00000538446 CCDC125Q86Z20 511 aa16.7■□□□□ 0.26
CDK2AP1-204ENST00000538446 PIGBQ92521 554 aa16.7■□□□□ 0.26
CDK2AP1-204ENST00000538446 THUMPD2Q9BTF0 503 aaKnown RBP16.7■□□□□ 0.26
CDK2AP1-204ENST00000538446 MRC1P22897 1456 aa16.69■□□□□ 0.26
CDK2AP1-204ENST00000538446 CALD1Q05682 793 aaKnown RBP16.69■□□□□ 0.26
CDK2AP1-204ENST00000538446 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
CDK2AP1-204ENST00000538446 SALL2Q9Y467 1007 aaPredicted RBP16.69■□□□□ 0.26
CDK2AP1-204ENST00000538446 DOT1LQ8TEK3 1739 aa16.69■□□□□ 0.26
CDK2AP1-204ENST00000538446 APBA3O96018 575 aa16.68■□□□□ 0.26
CDK2AP1-204ENST00000538446 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDK2AP1-204ENST00000538446 NHSQ6T4R5 1651 aa16.68■□□□□ 0.26
CDK2AP1-204ENST00000538446 TOGARAM1Q9Y4F4 1720 aa16.67■□□□□ 0.26
CDK2AP1-204ENST00000538446 ADAMTS7Q9UKP4 1686 aa16.67■□□□□ 0.26
CDK2AP1-204ENST00000538446 TAF7Q15545 349 aaPredicted RBP16.67■□□□□ 0.26
CDK2AP1-204ENST00000538446 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms