RNA–Protein interactions for RNA: ENST00000538361.1

C2CD3-211, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-211ENST00000538361 KCNQ2O43526 872 aa18.24■□□□□ 0.51
C2CD3-211ENST00000538361 NSD2O96028 1365 aa18.24■□□□□ 0.51
C2CD3-211ENST00000538361 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
C2CD3-211ENST00000538361 TATP17735 454 aaPredicted RBP18.23■□□□□ 0.51
C2CD3-211ENST00000538361 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
C2CD3-211ENST00000538361 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
C2CD3-211ENST00000538361 LRP5O75197 1615 aa18.23■□□□□ 0.51
C2CD3-211ENST00000538361 TNNT2P45379 298 aaPredicted RBP18.22■□□□□ 0.51
C2CD3-211ENST00000538361 POLKQ9UBT6 870 aa18.22■□□□□ 0.51
C2CD3-211ENST00000538361 MEGF6O75095 1541 aa18.22■□□□□ 0.51
C2CD3-211ENST00000538361 TXNRD1Q16881 649 aa18.21■□□□□ 0.51
C2CD3-211ENST00000538361 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
C2CD3-211ENST00000538361 PROM2Q8N271 834 aa18.2■□□□□ 0.5
C2CD3-211ENST00000538361 BTAF1O14981 1849 aa18.19■□□□□ 0.5
C2CD3-211ENST00000538361 MORC1Q86VD1 984 aa18.19■□□□□ 0.5
C2CD3-211ENST00000538361 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
C2CD3-211ENST00000538361 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
C2CD3-211ENST00000538361 PCDH11XQ9BZA7 1347 aa18.17■□□□□ 0.5
C2CD3-211ENST00000538361 PCDH11YQ9BZA8 1340 aa18.17■□□□□ 0.5
C2CD3-211ENST00000538361 STK32BQ9NY57 414 aa18.16■□□□□ 0.5
C2CD3-211ENST00000538361 PRIM1P49642 420 aaKnown RBP18.15■□□□□ 0.5
C2CD3-211ENST00000538361 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
C2CD3-211ENST00000538361 EYA1Q99502 592 aa18.14■□□□□ 0.49
C2CD3-211ENST00000538361 SPG7Q9UQ90 795 aa18.14■□□□□ 0.49
C2CD3-211ENST00000538361 NCAPD2Q15021 1401 aa18.14■□□□□ 0.49
C2CD3-211ENST00000538361 EIF4A2Q14240 407 aaKnown RBP18.13■□□□□ 0.49
C2CD3-211ENST00000538361 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
C2CD3-211ENST00000538361 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
C2CD3-211ENST00000538361 AMER1Q5JTC6 1135 aaPredicted RBP18.12■□□□□ 0.49
C2CD3-211ENST00000538361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
C2CD3-211ENST00000538361 SLC27A3Q5K4L6 730 aa18.11■□□□□ 0.49
C2CD3-211ENST00000538361 SPON1Q9HCB6 807 aa18.11■□□□□ 0.49
C2CD3-211ENST00000538361 PKD1L3Q7Z443 1732 aa18.11■□□□□ 0.49
C2CD3-211ENST00000538361 CYP27B1O15528 508 aa18.09■□□□□ 0.49
C2CD3-211ENST00000538361 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
C2CD3-211ENST00000538361 PLEKHG2Q9H7P9 1386 aa18.08■□□□□ 0.49
C2CD3-211ENST00000538361 IGSF1Q8N6C5 1336 aa18.07■□□□□ 0.48
C2CD3-211ENST00000538361 HMGB2P26583 209 aaKnown RBP18.07■□□□□ 0.48
C2CD3-211ENST00000538361 LRRC4BQ9NT99 713 aa18.07■□□□□ 0.48
C2CD3-211ENST00000538361 CASZ1Q86V15 1759 aa18.07■□□□□ 0.48
C2CD3-211ENST00000538361 LY75O60449 1722 aa18.06■□□□□ 0.48
C2CD3-211ENST00000538361 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
C2CD3-211ENST00000538361 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
C2CD3-211ENST00000538361 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
C2CD3-211ENST00000538361 PPP1R1BQ9UD71 204 aaPredicted RBP18.06■□□□□ 0.48
C2CD3-211ENST00000538361 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
C2CD3-211ENST00000538361 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
C2CD3-211ENST00000538361 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
C2CD3-211ENST00000538361 ITGB4P16144 1822 aa18.04■□□□□ 0.48
C2CD3-211ENST00000538361 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
C2CD3-211ENST00000538361 PLEKHO1Q53GL0 409 aaPredicted RBP18.03■□□□□ 0.48
C2CD3-211ENST00000538361 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
C2CD3-211ENST00000538361 PDGFDQ9GZP0 370 aaPredicted RBP18.03■□□□□ 0.48
C2CD3-211ENST00000538361 NPC1L1Q9UHC9 1359 aa18.03■□□□□ 0.48
C2CD3-211ENST00000538361 PHKG2P15735 406 aa18.02■□□□□ 0.48
C2CD3-211ENST00000538361 MTHFSP49914 203 aa18.02■□□□□ 0.48
C2CD3-211ENST00000538361 AMOTQ4VCS5 1084 aa18.02■□□□□ 0.48
C2CD3-211ENST00000538361 AKT1S1Q96B36 256 aa18.02■□□□□ 0.48
C2CD3-211ENST00000538361 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
C2CD3-211ENST00000538361 IL13P35225 146 aa18.01■□□□□ 0.47
C2CD3-211ENST00000538361 ZNF827Q17R98 1081 aa18.01■□□□□ 0.47
C2CD3-211ENST00000538361 MTFR1LQ9H019 292 aa18.01■□□□□ 0.47
C2CD3-211ENST00000538361 TFCP2L1Q9NZI6 479 aa18.01■□□□□ 0.47
C2CD3-211ENST00000538361 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
C2CD3-211ENST00000538361 KCNQ4P56696 695 aa18■□□□□ 0.47
C2CD3-211ENST00000538361 SULT6B1Q6IMI4 303 aa18■□□□□ 0.47
C2CD3-211ENST00000538361 TMOD3Q9NYL9 352 aa18■□□□□ 0.47
C2CD3-211ENST00000538361 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
C2CD3-211ENST00000538361 QSER1Q2KHR3 1735 aa17.99■□□□□ 0.47
C2CD3-211ENST00000538361 PIGBQ92521 554 aa17.99■□□□□ 0.47
C2CD3-211ENST00000538361 PALLDQ8WX93 1383 aa17.99■□□□□ 0.47
C2CD3-211ENST00000538361 DCAF5Q96JK2 942 aa17.98■□□□□ 0.47
C2CD3-211ENST00000538361 KDRP35968 1356 aa17.97■□□□□ 0.47
C2CD3-211ENST00000538361 CNGB1Q14028 1251 aaPredicted RBP17.97■□□□□ 0.47
C2CD3-211ENST00000538361 C1orf141Q5JVX7 400 aa17.97■□□□□ 0.47
C2CD3-211ENST00000538361 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
C2CD3-211ENST00000538361 AEBP1Q8IUX7 1158 aa17.97■□□□□ 0.47
C2CD3-211ENST00000538361 SLC16A10Q8TF71 515 aa17.97■□□□□ 0.47
C2CD3-211ENST00000538361 ERVV-2B6SEH9 535 aa17.96■□□□□ 0.47
C2CD3-211ENST00000538361 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
C2CD3-211ENST00000538361 PTGER2P43116 358 aa17.96■□□□□ 0.47
C2CD3-211ENST00000538361 C5P01031 1676 aa17.96■□□□□ 0.47
C2CD3-211ENST00000538361 PNPLA7Q6ZV29 1317 aa17.95■□□□□ 0.46
C2CD3-211ENST00000538361 TAF1LQ8IZX4 1826 aa17.94■□□□□ 0.46
C2CD3-211ENST00000538361 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
C2CD3-211ENST00000538361 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
C2CD3-211ENST00000538361 LOC102724428A0A0B4J2F2 783 aa17.92■□□□□ 0.46
C2CD3-211ENST00000538361 SIK1P57059 783 aa17.92■□□□□ 0.46
C2CD3-211ENST00000538361 CABP4P57796 275 aa17.92■□□□□ 0.46
C2CD3-211ENST00000538361 FLAD1Q8NFF5 587 aa17.92■□□□□ 0.46
C2CD3-211ENST00000538361 ASAP1Q9ULH1 1129 aa17.92■□□□□ 0.46
C2CD3-211ENST00000538361 HMOX1P09601 288 aa17.91■□□□□ 0.46
C2CD3-211ENST00000538361 POLD1P28340 1107 aa17.91■□□□□ 0.46
C2CD3-211ENST00000538361 SGIP1Q9BQI5 828 aa17.91■□□□□ 0.46
C2CD3-211ENST00000538361 AK7Q96M32 723 aa17.9■□□□□ 0.46
C2CD3-211ENST00000538361 CFAP53Q96M91 514 aa17.9■□□□□ 0.46
C2CD3-211ENST00000538361 ARXQ96QS3 562 aa17.9■□□□□ 0.46
C2CD3-211ENST00000538361 ATG3Q9NT62 314 aa17.9■□□□□ 0.46
C2CD3-211ENST00000538361 C4BP0C0L5 1744 aa17.89■□□□□ 0.46
C2CD3-211ENST00000538361 ATP6V1AP38606 617 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms