RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 PRDM16Q9HAZ2 1276 aa8.9□□□□□ -0.98
PTPRB-203ENST00000538174 NGEFQ8N5V2 710 aa8.89□□□□□ -0.99
PTPRB-203ENST00000538174 SECISBP2LQ93073 1101 aaKnown RBP8.89□□□□□ -0.99
PTPRB-203ENST00000538174 PPP4R2Q9NY27 417 aa8.89□□□□□ -0.99
PTPRB-203ENST00000538174 MYBBP1AQ9BQG0 1328 aaKnown RBP8.89□□□□□ -0.99
PTPRB-203ENST00000538174 LY75O60449 1722 aa8.89□□□□□ -0.99
PTPRB-203ENST00000538174 SYT17Q9BSW7 474 aa8.89□□□□□ -0.99
PTPRB-203ENST00000538174 TSHZ2Q9NRE2 1034 aa8.89□□□□□ -0.99
PTPRB-203ENST00000538174 APLP1P51693 650 aa8.88□□□□□ -0.99
PTPRB-203ENST00000538174 CDCA8Q53HL2 280 aa8.88□□□□□ -0.99
PTPRB-203ENST00000538174 C1orf115Q9H7X2 142 aa8.88□□□□□ -0.99
PTPRB-203ENST00000538174 TNS2Q63HR2 1409 aa8.88□□□□□ -0.99
PTPRB-203ENST00000538174 WDR90Q96KV7 1748 aa8.88□□□□□ -0.99
PTPRB-203ENST00000538174 ZNF526Q8TF50 670 aaPredicted RBP8.88□□□□□ -0.99
PTPRB-203ENST00000538174 TRIM37O94972 964 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 KIAA0232Q92628 1395 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 FANCIQ9NVI1 1328 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 PNISRQ8TF01 805 aaKnown RBP8.87□□□□□ -0.99
PTPRB-203ENST00000538174 PLEKHH1Q9ULM0 1364 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 PRELPP51888 382 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 SLC15A2Q16348 729 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 JMYQ8N9B5 988 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 IPO4Q8TEX9 1081 aaKnown RBP8.87□□□□□ -0.99
PTPRB-203ENST00000538174 CARD11Q9BXL7 1154 aa8.87□□□□□ -0.99
PTPRB-203ENST00000538174 PLEKHG3A1L390 1219 aa8.86□□□□□ -0.99
PTPRB-203ENST00000538174 PRDM11Q9NQV5 511 aa8.86□□□□□ -0.99
PTPRB-203ENST00000538174 HNRNPUQ00839 825 aaKnown RBP eCLIP8.85□□□□□ -0.99
PTPRB-203ENST00000538174 SLC27A3Q5K4L6 730 aa8.85□□□□□ -0.99
PTPRB-203ENST00000538174 PLCD4Q9BRC7 762 aa8.85□□□□□ -0.99
PTPRB-203ENST00000538174 CHMP4BQ9H444 224 aaKnown RBP8.85□□□□□ -0.99
PTPRB-203ENST00000538174 MRS2Q9HD23 443 aa8.85□□□□□ -0.99
PTPRB-203ENST00000538174 NUDCQ9Y266 331 aa8.85□□□□□ -0.99
PTPRB-203ENST00000538174 KIF13BQ9NQT8 1826 aa8.85□□□□□ -0.99
PTPRB-203ENST00000538174 PER1O15534 1290 aaPredicted RBP8.85□□□□□ -0.99
PTPRB-203ENST00000538174 NLRP13Q86W25 1043 aa8.85□□□□□ -0.99
PTPRB-203ENST00000538174 ADRA2BP18089 450 aa8.84□□□□□ -0.99
PTPRB-203ENST00000538174 WWC1Q8IX03 1113 aa8.84□□□□□ -0.99
PTPRB-203ENST00000538174 FAM177A1Q8N128 213 aaPredicted RBP8.84□□□□□ -0.99
PTPRB-203ENST00000538174 NSD3Q9BZ95 1437 aa8.84□□□□□ -0.99
PTPRB-203ENST00000538174 PLEKHG2Q9H7P9 1386 aa8.84□□□□□ -0.99
PTPRB-203ENST00000538174 PXDNLA1KZ92 1463 aa8.84□□□□□ -0.99
PTPRB-203ENST00000538174 RAD21O60216 631 aa8.84□□□□□ -0.99
PTPRB-203ENST00000538174 TUBGCP6Q96RT7 1819 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 CC2D2BQ6DHV5 1058 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 TESK2Q96S53 571 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 RNF216Q9NWF9 866 aaPredicted RBP8.83□□□□□ -1
PTPRB-203ENST00000538174 BTAF1O14981 1849 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 ZNF831Q5JPB2 1677 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 ATP10DQ9P241 1426 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 KCNG1Q9UIX4 513 aa8.83□□□□□ -1
PTPRB-203ENST00000538174 TNRC6CQ9HCJ0 1690 aaKnown RBP8.83□□□□□ -1
PTPRB-203ENST00000538174 NPM3O75607 178 aaKnown RBP8.82□□□□□ -1
PTPRB-203ENST00000538174 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
PTPRB-203ENST00000538174 ADGRF5Q8IZF2 1346 aa8.82□□□□□ -1
PTPRB-203ENST00000538174 WASLO00401 505 aaPredicted RBP8.82□□□□□ -1
PTPRB-203ENST00000538174 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
PTPRB-203ENST00000538174 RBM25P49756 843 aaKnown RBP8.81□□□□□ -1
PTPRB-203ENST00000538174 TMF1P82094 1093 aa8.81□□□□□ -1
PTPRB-203ENST00000538174 MTMR7Q9Y216 660 aa8.81□□□□□ -1
PTPRB-203ENST00000538174 CD2APQ9Y5K6 639 aa8.81□□□□□ -1
PTPRB-203ENST00000538174 POLD1P28340 1107 aa8.81□□□□□ -1
PTPRB-203ENST00000538174 FOXD4L5Q5VV16 416 aaPredicted RBP8.81□□□□□ -1
PTPRB-203ENST00000538174 RGS22Q8NE09 1264 aa8.81□□□□□ -1
PTPRB-203ENST00000538174 FOXD4L4Q8WXT5 416 aaPredicted RBP8.81□□□□□ -1
PTPRB-203ENST00000538174 FAM43BQ6ZT52 329 aaPredicted RBP8.8□□□□□ -1
PTPRB-203ENST00000538174 HIRIP3Q9BW71 556 aaPredicted RBP8.8□□□□□ -1
PTPRB-203ENST00000538174 FSTL1Q12841 308 aa8.8□□□□□ -1
PTPRB-203ENST00000538174 CARD10Q9BWT7 1032 aa8.8□□□□□ -1
PTPRB-203ENST00000538174 ST20-MTHFSA0A0A6YYL1 179 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 A0A0G2JS52 829 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 DCAF11Q8TEB1 546 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 WDR17Q8IZU2 1322 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 CPSF1Q10570 1443 aaKnown RBP8.79□□□□□ -1
PTPRB-203ENST00000538174 TXNRD1Q16881 649 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 WAPLQ7Z5K2 1190 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 FLAD1Q8NFF5 587 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 USP35Q9P2H5 1018 aa8.79□□□□□ -1
PTPRB-203ENST00000538174 GRIPAP1Q4V328 841 aa8.78□□□□□ -1
PTPRB-203ENST00000538174 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
PTPRB-203ENST00000538174 AKT1S1Q96B36 256 aa8.78□□□□□ -1
PTPRB-203ENST00000538174 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
PTPRB-203ENST00000538174 PPM1GO15355 546 aaPredicted RBP8.78□□□□□ -1
PTPRB-203ENST00000538174 NFAT5O94916 1531 aa8.78□□□□□ -1
PTPRB-203ENST00000538174 PRR36Q9H6K5 1346 aa8.78□□□□□ -1
PTPRB-203ENST00000538174 XPCQ01831 940 aaPredicted RBP8.77□□□□□ -1
PTPRB-203ENST00000538174 FTSJ3Q8IY81 847 aaKnown RBP8.77□□□□□ -1
PTPRB-203ENST00000538174 DDB1Q16531 1140 aa8.77□□□□□ -1.01
PTPRB-203ENST00000538174 PROM2Q8N271 834 aa8.77□□□□□ -1.01
PTPRB-203ENST00000538174 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
PTPRB-203ENST00000538174 EVA1CP58658 441 aa8.77□□□□□ -1.01
PTPRB-203ENST00000538174 PKD1L3Q7Z443 1732 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 DNAJC5GQ8N7S2 189 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 TMC1Q8TDI8 760 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 NSD2O96028 1365 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 PPIP5K1Q6PFW1 1433 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 KIAA1551Q9HCM1 1747 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 ARFGEF1Q9Y6D6 1849 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 BRPF1P55201 1214 aaPredicted RBP8.76□□□□□ -1.01
PTPRB-203ENST00000538174 USP31Q70CQ4 1352 aa8.76□□□□□ -1.01
PTPRB-203ENST00000538174 MON2Q7Z3U7 1717 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms