RNA–Protein interactions for RNA: ENST00000538129.1

DDB1-210, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-210ENST00000538129 DIXDC1Q155Q3 683 aa8.65□□□□□ -1.02
DDB1-210ENST00000538129 ZNF326Q5BKZ1 582 aaKnown RBP8.65□□□□□ -1.02
DDB1-210ENST00000538129 CLTCL1P53675 1640 aa8.65□□□□□ -1.03
DDB1-210ENST00000538129 SCAF11Q99590 1463 aaKnown RBP8.64□□□□□ -1.03
DDB1-210ENST00000538129 NPHP4O75161 1426 aaPredicted RBP8.64□□□□□ -1.03
DDB1-210ENST00000538129 RIMS2Q9UQ26 1411 aa8.64□□□□□ -1.03
DDB1-210ENST00000538129 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
DDB1-210ENST00000538129 ZFYVE9O95405 1425 aa8.63□□□□□ -1.03
DDB1-210ENST00000538129 PPP1R15AO75807 674 aaPredicted RBP8.63□□□□□ -1.03
DDB1-210ENST00000538129 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
DDB1-210ENST00000538129 NLRP7Q8WX94 980 aa8.63□□□□□ -1.03
DDB1-210ENST00000538129 FAM217BQ9NTX9 383 aaPredicted RBP8.63□□□□□ -1.03
DDB1-210ENST00000538129 PCDHB3Q9Y5E6 796 aa8.63□□□□□ -1.03
DDB1-210ENST00000538129 NEURL4Q96JN8 1562 aa8.63□□□□□ -1.03
DDB1-210ENST00000538129 ACTN4O43707 911 aaKnown RBP8.62□□□□□ -1.03
DDB1-210ENST00000538129 USP46P62068 366 aa8.62□□□□□ -1.03
DDB1-210ENST00000538129 GIGYF2Q6Y7W6 1299 aaKnown RBP8.62□□□□□ -1.03
DDB1-210ENST00000538129 NUTM1Q86Y26 1132 aa8.62□□□□□ -1.03
DDB1-210ENST00000538129 TBX22Q9Y458 520 aa8.62□□□□□ -1.03
DDB1-210ENST00000538129 SPATA31E1Q6ZUB1 1445 aa8.62□□□□□ -1.03
DDB1-210ENST00000538129 PLEKHG1Q9ULL1 1385 aa8.61□□□□□ -1.03
DDB1-210ENST00000538129 CD46P15529 392 aa8.61□□□□□ -1.03
DDB1-210ENST00000538129 GCGRP47871 477 aa8.61□□□□□ -1.03
DDB1-210ENST00000538129 RGL3Q3MIN7 710 aa8.61□□□□□ -1.03
DDB1-210ENST00000538129 NUTM2DQ5VT03 806 aaPredicted RBP8.61□□□□□ -1.03
DDB1-210ENST00000538129 IQGAP1P46940 1657 aa8.61□□□□□ -1.03
DDB1-210ENST00000538129 NR1I2O75469 434 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 SLC10A3P09131 477 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 KCNC4Q03721 635 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 SLC26A8Q96RN1 970 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 TMUB1Q9BVT8 246 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 IL21Q9HBE4 155 aa8.6□□□□□ -1.03
DDB1-210ENST00000538129 DHX57Q6P158 1386 aaKnown RBP8.6□□□□□ -1.03
DDB1-210ENST00000538129 KDM4AO75164 1064 aa8.59□□□□□ -1.03
DDB1-210ENST00000538129 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
DDB1-210ENST00000538129 APLP1P51693 650 aa8.59□□□□□ -1.03
DDB1-210ENST00000538129 ZNF335Q9H4Z2 1342 aaPredicted RBP8.58□□□□□ -1.04
DDB1-210ENST00000538129 KCNA6P17658 529 aa8.58□□□□□ -1.04
DDB1-210ENST00000538129 NEXMIFQ5QGS0 1516 aa8.58□□□□□ -1.04
DDB1-210ENST00000538129 DDRGK1Q96HY6 314 aa8.57□□□□□ -1.04
DDB1-210ENST00000538129 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
DDB1-210ENST00000538129 PPLO60437 1756 aa8.57□□□□□ -1.04
DDB1-210ENST00000538129 LTBP4Q8N2S1 1624 aa8.57□□□□□ -1.04
DDB1-210ENST00000538129 PIK3R4Q99570 1358 aa8.57□□□□□ -1.04
DDB1-210ENST00000538129 ADAMTS13Q76LX8 1427 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 DCAF11Q8TEB1 546 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 SIN3AQ96ST3 1273 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 RSPH6AQ9H0K4 717 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
DDB1-210ENST00000538129 ADGRF5Q8IZF2 1346 aa8.55□□□□□ -1.04
DDB1-210ENST00000538129 CHD2O14647 1828 aaKnown RBP8.55□□□□□ -1.04
DDB1-210ENST00000538129 ITGBL1O95965 494 aaPredicted RBP8.55□□□□□ -1.04
DDB1-210ENST00000538129 Q3C1V9 767 aa8.55□□□□□ -1.04
DDB1-210ENST00000538129 MTRQ99707 1265 aa8.55□□□□□ -1.04
DDB1-210ENST00000538129 C14orf93Q9H972 538 aaKnown RBP8.55□□□□□ -1.04
DDB1-210ENST00000538129 CPS1P31327 1500 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 IFT172Q9UG01 1749 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 DIP2AQ14689 1571 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 GGCXP38435 758 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 COPS2P61201 443 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 FUT2Q10981 343 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 NEUROD1Q13562 356 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 IFFO2Q5TF58 517 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
DDB1-210ENST00000538129 AMOTL2Q9Y2J4 779 aa8.54□□□□□ -1.04
DDB1-210ENST00000538129 IQSEC2Q5JU85 1478 aa8.53□□□□□ -1.04
DDB1-210ENST00000538129 PROSER2Q86WR7 435 aaPredicted RBP8.53□□□□□ -1.04
DDB1-210ENST00000538129 KDM4CQ9H3R0 1056 aa8.53□□□□□ -1.04
DDB1-210ENST00000538129 NRXN3Q9Y4C0 1643 aa8.53□□□□□ -1.04
DDB1-210ENST00000538129 STRCP1A6NGW2 1772 aa8.53□□□□□ -1.04
DDB1-210ENST00000538129 CLSPNQ9HAW4 1339 aa8.53□□□□□ -1.04
DDB1-210ENST00000538129 MYOM2P54296 1465 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 NRXN1Q9ULB1 1477 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 METP08581 1390 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 ALKQ9UM73 1620 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 ZPR1O75312 459 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 PIK3C2GO75747 1445 aa8.52□□□□□ -1.05
DDB1-210ENST00000538129 LRRC7Q96NW7 1537 aa8.51□□□□□ -1.05
DDB1-210ENST00000538129 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
DDB1-210ENST00000538129 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
DDB1-210ENST00000538129 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
DDB1-210ENST00000538129 C14orf37Q86TY3 774 aa8.51□□□□□ -1.05
DDB1-210ENST00000538129 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
DDB1-210ENST00000538129 MS4A1P11836 297 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 NWD1Q149M9 1564 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 MORN1Q5T089 497 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 SCUBE3Q8IX30 993 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
DDB1-210ENST00000538129 FBXO41Q8TF61 875 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 PTPRUQ92729 1446 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 SIRT1Q96EB6 747 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 SALL2Q9Y467 1007 aaPredicted RBP8.5□□□□□ -1.05
DDB1-210ENST00000538129 NCOA3Q9Y6Q9 1424 aa8.5□□□□□ -1.05
DDB1-210ENST00000538129 NKTRP30414 1462 aaKnown RBP8.5□□□□□ -1.05
DDB1-210ENST00000538129 TMEM94Q12767 1356 aa8.49□□□□□ -1.05
DDB1-210ENST00000538129 TOM1O60784 492 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms