RNA–Protein interactions for RNA: ENST00000538051.5

LMO3-219, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-219ENST00000538051 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
LMO3-219ENST00000538051 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
LMO3-219ENST00000538051 NLRP2Q9NX02 1062 aa16.36■□□□□ 0.21
LMO3-219ENST00000538051 A0A0G2JS52 829 aa16.35■□□□□ 0.21
LMO3-219ENST00000538051 HTATSF1O43719 755 aaKnown RBP16.35■□□□□ 0.21
LMO3-219ENST00000538051 HMOX1P09601 288 aa16.35■□□□□ 0.21
LMO3-219ENST00000538051 MYT1Q01538 1121 aa16.35■□□□□ 0.21
LMO3-219ENST00000538051 NFE2L2Q16236 605 aa16.35■□□□□ 0.21
LMO3-219ENST00000538051 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
LMO3-219ENST00000538051 PKD1L3Q7Z443 1732 aa16.35■□□□□ 0.21
LMO3-219ENST00000538051 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
LMO3-219ENST00000538051 CALD1Q05682 793 aaKnown RBP16.34■□□□□ 0.21
LMO3-219ENST00000538051 SEPT12Q8IYM1 358 aa16.34■□□□□ 0.21
LMO3-219ENST00000538051 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.21
LMO3-219ENST00000538051 APAF1O14727 1248 aa16.33■□□□□ 0.2
LMO3-219ENST00000538051 TATP17735 454 aaPredicted RBP16.33■□□□□ 0.2
LMO3-219ENST00000538051 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
LMO3-219ENST00000538051 PLEKHO1Q53GL0 409 aaPredicted RBP16.33■□□□□ 0.2
LMO3-219ENST00000538051 DEFB132Q7Z7B7 95 aa16.33■□□□□ 0.2
LMO3-219ENST00000538051 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
LMO3-219ENST00000538051 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
LMO3-219ENST00000538051 GLI3P10071 1580 aa16.33■□□□□ 0.2
LMO3-219ENST00000538051 VPS72Q15906 364 aa16.32■□□□□ 0.2
LMO3-219ENST00000538051 EP400Q96L91 3159 aa16.32■□□□□ 0.2
LMO3-219ENST00000538051 IL2RBP14784 551 aa16.31■□□□□ 0.2
LMO3-219ENST00000538051 LARP1Q6PKG0 1096 aaKnown RBP16.31■□□□□ 0.2
LMO3-219ENST00000538051 BARGINQ6ZT62 677 aa16.31■□□□□ 0.2
LMO3-219ENST00000538051 CCDC146Q8IYE0 955 aa16.31■□□□□ 0.2
LMO3-219ENST00000538051 STRN4Q9NRL3 753 aa16.31■□□□□ 0.2
LMO3-219ENST00000538051 SPG7Q9UQ90 795 aa16.31■□□□□ 0.2
LMO3-219ENST00000538051 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
LMO3-219ENST00000538051 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 IL16Q14005 1332 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 SPATA31A1Q5TZJ5 1347 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 ZNF521Q96K83 1311 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 WDR63Q8IWG1 891 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
LMO3-219ENST00000538051 HSP90AB1P08238 724 aaKnown RBP16.29■□□□□ 0.2
LMO3-219ENST00000538051 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
LMO3-219ENST00000538051 PHACTR3Q96KR7 559 aa16.29■□□□□ 0.2
LMO3-219ENST00000538051 MEGF6O75095 1541 aa16.29■□□□□ 0.2
LMO3-219ENST00000538051 RIPK4P57078 832 aa16.28■□□□□ 0.2
LMO3-219ENST00000538051 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
LMO3-219ENST00000538051 PCDH11XQ9BZA7 1347 aa16.27■□□□□ 0.2
LMO3-219ENST00000538051 PCDH11YQ9BZA8 1340 aa16.27■□□□□ 0.2
LMO3-219ENST00000538051 AKAP4Q5JQC9 854 aa16.27■□□□□ 0.2
LMO3-219ENST00000538051 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
LMO3-219ENST00000538051 ADAMTS7Q9UKP4 1686 aa16.27■□□□□ 0.19
LMO3-219ENST00000538051 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
LMO3-219ENST00000538051 CENPBP07199 599 aaPredicted RBP16.26■□□□□ 0.19
LMO3-219ENST00000538051 C1orf141Q5JVX7 400 aa16.26■□□□□ 0.19
LMO3-219ENST00000538051 WWC1Q8IX03 1113 aa16.26■□□□□ 0.19
LMO3-219ENST00000538051 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
LMO3-219ENST00000538051 YTHDC1Q96MU7 727 aaKnown RBP16.26■□□□□ 0.19
LMO3-219ENST00000538051 GOLGA2Q08379 1002 aa16.25■□□□□ 0.19
LMO3-219ENST00000538051 FAM98CQ17RN3 349 aaKnown RBP16.25■□□□□ 0.19
LMO3-219ENST00000538051 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
LMO3-219ENST00000538051 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
LMO3-219ENST00000538051 LRRC37A3O60309 1634 aa16.25■□□□□ 0.19
LMO3-219ENST00000538051 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
LMO3-219ENST00000538051 E9PSI1 815 aa16.24■□□□□ 0.19
LMO3-219ENST00000538051 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
LMO3-219ENST00000538051 ZCRB1Q8TBF4 217 aaKnown RBP16.24■□□□□ 0.19
LMO3-219ENST00000538051 ONECUT3O60422 494 aaPredicted RBP16.23■□□□□ 0.19
LMO3-219ENST00000538051 BAG6P46379 1132 aa16.23■□□□□ 0.19
LMO3-219ENST00000538051 ZNF530Q6P9A1 599 aaPredicted RBP16.23■□□□□ 0.19
LMO3-219ENST00000538051 TRIM35Q9UPQ4 493 aa16.23■□□□□ 0.19
LMO3-219ENST00000538051 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
LMO3-219ENST00000538051 SHANK3Q9BYB0 1731 aa16.22■□□□□ 0.19
LMO3-219ENST00000538051 THSD7AQ9UPZ6 1657 aa16.22■□□□□ 0.19
LMO3-219ENST00000538051 MYH16Q9H6N6 1097 aa16.22■□□□□ 0.19
LMO3-219ENST00000538051 SCN11AQ9UI33 1791 aa16.22■□□□□ 0.19
LMO3-219ENST00000538051 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
LMO3-219ENST00000538051 NKX1-1Q15270 411 aaPredicted RBP16.21■□□□□ 0.19
LMO3-219ENST00000538051 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
LMO3-219ENST00000538051 VIRMAQ69YN4 1812 aaKnown RBP16.21■□□□□ 0.19
LMO3-219ENST00000538051 EXOC5O00471 708 aa16.2■□□□□ 0.18
LMO3-219ENST00000538051 PHKG2P15735 406 aa16.2■□□□□ 0.18
LMO3-219ENST00000538051 GNAI1P63096 354 aa16.2■□□□□ 0.18
LMO3-219ENST00000538051 NEUROD2Q15784 382 aa16.2■□□□□ 0.18
LMO3-219ENST00000538051 IFT57Q9NWB7 429 aa16.2■□□□□ 0.18
LMO3-219ENST00000538051 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
LMO3-219ENST00000538051 MRC1P22897 1456 aa16.2■□□□□ 0.18
LMO3-219ENST00000538051 FAM182BQ5T319 152 aa16.19■□□□□ 0.18
LMO3-219ENST00000538051 CT47B1P0C2W7 299 aaPredicted RBP16.18■□□□□ 0.18
LMO3-219ENST00000538051 DDB1Q16531 1140 aa16.18■□□□□ 0.18
LMO3-219ENST00000538051 TRMT2AQ8IZ69 625 aaKnown RBP16.18■□□□□ 0.18
LMO3-219ENST00000538051 CFAP44Q96MT7 982 aa16.18■□□□□ 0.18
LMO3-219ENST00000538051 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
LMO3-219ENST00000538051 BCL9O00512 1426 aa16.18■□□□□ 0.18
LMO3-219ENST00000538051 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
LMO3-219ENST00000538051 SLFN5Q08AF3 891 aa16.17■□□□□ 0.18
LMO3-219ENST00000538051 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
LMO3-219ENST00000538051 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
LMO3-219ENST00000538051 ERVV-2B6SEH9 535 aa16.16■□□□□ 0.18
LMO3-219ENST00000538051 CYP27B1O15528 508 aa16.16■□□□□ 0.18
LMO3-219ENST00000538051 CHMP4AQ9BY43 222 aa16.16■□□□□ 0.18
LMO3-219ENST00000538051 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms