RNA–Protein interactions for RNA: ENST00000537882.2

NDRG1-229, Transcript of N-myc downstream regulated 1, human

TSL 2 BASIC

Gene NDRG1, Length 2,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NDRG1-229	ENST00000537882	SLC20A2	Q08357	652 aa		13.73	□□□□□ -0.21
NDRG1-229	ENST00000537882	NCBP1	Q09161	790 aa	Known RBP	13.73	□□□□□ -0.21
NDRG1-229	ENST00000537882	CNKSR2	Q8WXI2	1034 aa		13.73	□□□□□ -0.21
NDRG1-229	ENST00000537882	DCTPP1	Q9H773	170 aa		13.73	□□□□□ -0.21
NDRG1-229	ENST00000537882	ADGRF5	Q8IZF2	1346 aa		13.73	□□□□□ -0.21
NDRG1-229	ENST00000537882	DDX41	Q9UJV9	622 aa	Known RBP	13.73	□□□□□ -0.21
NDRG1-229	ENST00000537882	CCDC66	A2RUB6	948 aa		13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	MRPL50	Q8N5N7	158 aa	Known RBP	13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	TMEM87A	Q8NBN3	555 aa		13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	KCNF1	Q9H3M0	494 aa		13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	COL3A1	P02461	1466 aa	Predicted RBP	13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	NRXN1	Q9ULB1	1477 aa		13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	ZC3H13	Q5T200	1668 aa	Known RBP	13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	CDK11B	P21127	795 aa	Known RBP	13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	PYCARD	Q9ULZ3	195 aa		13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	SETBP1	Q9Y6X0	1596 aa		13.72	□□□□□ -0.21
NDRG1-229	ENST00000537882	GADD45B	O75293	160 aa	Predicted RBP	13.71	□□□□□ -0.21
NDRG1-229	ENST00000537882	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.71	□□□□□ -0.21
NDRG1-229	ENST00000537882	SDS	P20132	328 aa		13.71	□□□□□ -0.21
NDRG1-229	ENST00000537882	TET3	O43151	1660 aa		13.71	□□□□□ -0.22
NDRG1-229	ENST00000537882	HCLS1	P14317	486 aa	Predicted RBP	13.71	□□□□□ -0.22
NDRG1-229	ENST00000537882	IRX5	P78411	483 aa	Predicted RBP	13.71	□□□□□ -0.22
NDRG1-229	ENST00000537882	USP48	Q86UV5	1035 aa		13.71	□□□□□ -0.22
NDRG1-229	ENST00000537882	KIF24	Q5T7B8	1368 aa		13.7	□□□□□ -0.22
NDRG1-229	ENST00000537882	U2SURP	O15042	1029 aa	Known RBP	13.7	□□□□□ -0.22
NDRG1-229	ENST00000537882	ERC2	O15083	957 aa		13.7	□□□□□ -0.22
NDRG1-229	ENST00000537882	MX1	P20591	662 aa		13.7	□□□□□ -0.22
NDRG1-229	ENST00000537882	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	13.7	□□□□□ -0.22	7e-9	■■■□□ 17.9
NDRG1-229	ENST00000537882	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.7	□□□□□ -0.22
NDRG1-229	ENST00000537882	PUS7	Q96PZ0	661 aa	Known RBP	13.7	□□□□□ -0.22
NDRG1-229	ENST00000537882	VGLL3	A8MV65	326 aa		13.69	□□□□□ -0.22
NDRG1-229	ENST00000537882	ZBTB22	O15209	634 aa		13.69	□□□□□ -0.22
NDRG1-229	ENST00000537882	NEK4	P51957	841 aa		13.69	□□□□□ -0.22
NDRG1-229	ENST00000537882	IFT172	Q9UG01	1749 aa		13.69	□□□□□ -0.22
NDRG1-229	ENST00000537882	VAMP4	O75379	141 aa		13.69	□□□□□ -0.22
NDRG1-229	ENST00000537882	TERF2	Q15554	542 aa		13.69	□□□□□ -0.22
NDRG1-229	ENST00000537882	GOLGA6L6	A8MZA4	724 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	QRICH2	Q9H0J4	1663 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	SMTNL1	A8MU46	457 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	KCNJ4	P48050	445 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	FUCA2	Q9BTY2	467 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	DEPDC5	O75140	1603 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	PPP6R1	Q9UPN7	881 aa		13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	WDR33	Q9C0J8	1336 aa	Known RBP	13.68	□□□□□ -0.22
NDRG1-229	ENST00000537882	RTL1	A6NKG5	1358 aa		13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	KNDC1	Q76NI1	1749 aa		13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	SMARCA5	O60264	1052 aa	Predicted RBP	13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	FAM193A	P78312	1265 aa		13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	TIGD1	Q96MW7	591 aa		13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	DNAJC2	Q99543	621 aa	Known RBP	13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	GDPD2	Q9HCC8	539 aa		13.67	□□□□□ -0.22
NDRG1-229	ENST00000537882	VGF	O15240	615 aa	Predicted RBP	13.66	□□□□□ -0.22
NDRG1-229	ENST00000537882	KIF18A	Q8NI77	898 aa		13.66	□□□□□ -0.22
NDRG1-229	ENST00000537882	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	AP5Z1	O43299	807 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	API5	Q9BZZ5	524 aa	Known RBP	13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	UBE2H	P62256	183 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	CREBRF	Q8IUR6	639 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	KRT222	Q8N1A0	295 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	VWDE	Q8N2E2	1590 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	ANAPC15	P60006	121 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	ANKRD44	Q8N8A2	993 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	IL17RA	Q96F46	866 aa		13.65	□□□□□ -0.22
NDRG1-229	ENST00000537882	TULP2	O00295	520 aa		13.64	□□□□□ -0.23
NDRG1-229	ENST00000537882	CALCOCO1	Q9P1Z2	691 aa		13.64	□□□□□ -0.23
NDRG1-229	ENST00000537882	PAXBP1	Q9Y5B6	917 aa		13.64	□□□□□ -0.23
NDRG1-229	ENST00000537882	FAM53C	Q9NYF3	392 aa		13.64	□□□□□ -0.23
NDRG1-229	ENST00000537882	RGS12	O14924	1447 aa		13.64	□□□□□ -0.23
NDRG1-229	ENST00000537882	ATAD2	Q6PL18	1390 aa		13.63	□□□□□ -0.23
NDRG1-229	ENST00000537882	ATP10D	Q9P241	1426 aa		13.63	□□□□□ -0.23
NDRG1-229	ENST00000537882	SPAG9	O60271	1321 aa	Known RBP	13.63	□□□□□ -0.23
NDRG1-229	ENST00000537882	KIF1B	O60333	1816 aa		13.63	□□□□□ -0.23
NDRG1-229	ENST00000537882	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.63	□□□□□ -0.23
NDRG1-229	ENST00000537882	TRAK1	Q9UPV9	953 aa		13.63	□□□□□ -0.23
NDRG1-229	ENST00000537882	PLCH2	O75038	1416 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	PLCB2	Q00722	1185 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	SRCIN1	Q9C0H9	1055 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	OSBPL3	Q9H4L5	887 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	MCC	P23508	829 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	TSPYL6	Q8N831	410 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	SPC24	Q8NBT2	197 aa		13.62	□□□□□ -0.23
NDRG1-229	ENST00000537882	ADGRB1	O14514	1584 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	FCHSD2	O94868	740 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	PNPLA6	Q8IY17	1366 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	ABCC1	P33527	1531 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	DIAPH1	O60610	1272 aa	Known RBP	13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	CCDC112	Q8NEF3	446 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	ZNF397	Q8NF99	534 aa	Predicted RBP	13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	TSPYL1	Q9H0U9	437 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	FBXO3	Q9UK99	471 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	CNPY2	Q9Y2B0	182 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	CDC42BPG	Q6DT37	1551 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	UGGT1	Q9NYU2	1555 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	TCHH	Q07283	1943 aa		13.61	□□□□□ -0.23
NDRG1-229	ENST00000537882	TNNT1	P13805	278 aa		13.6	□□□□□ -0.23
NDRG1-229	ENST00000537882	PTGS1	P23219	599 aa		13.6	□□□□□ -0.23

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