RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 PTGER2P43116 358 aa13.46□□□□□ -0.25
CHD4-207ENST00000537634 MTFR1LQ9H019 292 aa13.46□□□□□ -0.25
CHD4-207ENST00000537634 INSRP06213 1382 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 NBPF6Q5VWK0 638 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 USHBP1Q8N6Y0 703 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 RAPGEF4Q8WZA2 1011 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 NBPF4Q96M43 638 aa13.45□□□□□ -0.26
CHD4-207ENST00000537634 QSER1Q2KHR3 1735 aa13.44□□□□□ -0.26
CHD4-207ENST00000537634 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
CHD4-207ENST00000537634 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
CHD4-207ENST00000537634 CARD14Q9BXL6 1004 aa13.44□□□□□ -0.26
CHD4-207ENST00000537634 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
CHD4-207ENST00000537634 LY75O60449 1722 aa13.44□□□□□ -0.26
CHD4-207ENST00000537634 TATP17735 454 aaPredicted RBP13.43□□□□□ -0.26
CHD4-207ENST00000537634 YY1P25490 414 aa13.43□□□□□ -0.26
CHD4-207ENST00000537634 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
CHD4-207ENST00000537634 ANKRD26Q9UPS8 1709 aa13.43□□□□□ -0.26
CHD4-207ENST00000537634 NSD2O96028 1365 aa13.43□□□□□ -0.26
CHD4-207ENST00000537634 PCDH11XQ9BZA7 1347 aa13.41□□□□□ -0.26
CHD4-207ENST00000537634 PCDH11YQ9BZA8 1340 aa13.41□□□□□ -0.26
CHD4-207ENST00000537634 TUBGCP6Q96RT7 1819 aa13.41□□□□□ -0.26
CHD4-207ENST00000537634 AKT1S1Q96B36 256 aa13.41□□□□□ -0.26
CHD4-207ENST00000537634 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
CHD4-207ENST00000537634 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
CHD4-207ENST00000537634 EMILIN1Q9Y6C2 1016 aa13.41□□□□□ -0.26
CHD4-207ENST00000537634 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
CHD4-207ENST00000537634 KCNQ4P56696 695 aa13.4□□□□□ -0.26
CHD4-207ENST00000537634 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
CHD4-207ENST00000537634 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
CHD4-207ENST00000537634 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
CHD4-207ENST00000537634 MAP2P11137 1827 aaKnown RBP13.39□□□□□ -0.27
CHD4-207ENST00000537634 ARXQ96QS3 562 aa13.39□□□□□ -0.27
CHD4-207ENST00000537634 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
CHD4-207ENST00000537634 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
CHD4-207ENST00000537634 SLC16A10Q8TF71 515 aa13.38□□□□□ -0.27
CHD4-207ENST00000537634 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
CHD4-207ENST00000537634 C5P01031 1676 aa13.37□□□□□ -0.27
CHD4-207ENST00000537634 TOGARAM1Q9Y4F4 1720 aa13.37□□□□□ -0.27
CHD4-207ENST00000537634 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHD4-207ENST00000537634 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
CHD4-207ENST00000537634 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
CHD4-207ENST00000537634 COL24A1Q17RW2 1714 aa13.36□□□□□ -0.27
CHD4-207ENST00000537634 MAP3K5Q99683 1374 aa13.36□□□□□ -0.27
CHD4-207ENST00000537634 POLD1P28340 1107 aa13.36□□□□□ -0.27
CHD4-207ENST00000537634 CCER1Q8TC90 406 aaPredicted RBP13.36□□□□□ -0.27
CHD4-207ENST00000537634 ITGB4P16144 1822 aa13.36□□□□□ -0.27
CHD4-207ENST00000537634 CYP27B1O15528 508 aa13.35□□□□□ -0.27
CHD4-207ENST00000537634 PALLDQ8WX93 1383 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 MSH5O43196 834 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
CHD4-207ENST00000537634 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
CHD4-207ENST00000537634 MPRIPQ6WCQ1 1025 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
CHD4-207ENST00000537634 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
CHD4-207ENST00000537634 EYA1Q99502 592 aa13.33□□□□□ -0.28
CHD4-207ENST00000537634 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
CHD4-207ENST00000537634 CHD4Q14839 1912 aa13.32□□□□□ -0.28
CHD4-207ENST00000537634 C4BP0C0L5 1744 aa13.31□□□□□ -0.28
CHD4-207ENST00000537634 PANK3Q9H999 370 aa13.31□□□□□ -0.28
CHD4-207ENST00000537634 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.286e-9■■■□□ 17.5
CHD4-207ENST00000537634 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
CHD4-207ENST00000537634 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
CHD4-207ENST00000537634 COL23A1Q86Y22 540 aaPredicted RBP13.3□□□□□ -0.28
CHD4-207ENST00000537634 GPR162Q16538 588 aa13.29□□□□□ -0.28
CHD4-207ENST00000537634 FLAD1Q8NFF5 587 aa13.29□□□□□ -0.28
CHD4-207ENST00000537634 PIGBQ92521 554 aa13.29□□□□□ -0.28
CHD4-207ENST00000537634 TMOD3Q9NYL9 352 aa13.29□□□□□ -0.28
CHD4-207ENST00000537634 PLEKHG2Q9H7P9 1386 aa13.29□□□□□ -0.28
CHD4-207ENST00000537634 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
CHD4-207ENST00000537634 IFNL2Q8IZJ0 200 aa13.28□□□□□ -0.28
CHD4-207ENST00000537634 AK7Q96M32 723 aa13.28□□□□□ -0.28
CHD4-207ENST00000537634 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.28
CHD4-207ENST00000537634 PHKG2P15735 406 aa13.27□□□□□ -0.29
CHD4-207ENST00000537634 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
CHD4-207ENST00000537634 IGSF1Q8N6C5 1336 aa13.27□□□□□ -0.29
CHD4-207ENST00000537634 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
CHD4-207ENST00000537634 NLGN2Q8NFZ4 835 aa13.26□□□□□ -0.29
CHD4-207ENST00000537634 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
CHD4-207ENST00000537634 SIK1P57059 783 aa13.25□□□□□ -0.29
CHD4-207ENST00000537634 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
CHD4-207ENST00000537634 KNSTRNQ9Y448 316 aa13.25□□□□□ -0.29
CHD4-207ENST00000537634 PHF14O94880 888 aa13.24□□□□□ -0.29
CHD4-207ENST00000537634 ASAP1Q9ULH1 1129 aa13.24□□□□□ -0.29
CHD4-207ENST00000537634 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
CHD4-207ENST00000537634 HSP90AB1P08238 724 aaKnown RBP13.23□□□□□ -0.29
CHD4-207ENST00000537634 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
CHD4-207ENST00000537634 LINC00116Q8NCU8 138 aa13.23□□□□□ -0.29
CHD4-207ENST00000537634 SSFA2P28290 1259 aa13.22□□□□□ -0.29
CHD4-207ENST00000537634 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
CHD4-207ENST00000537634 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
CHD4-207ENST00000537634 DCAF5Q96JK2 942 aa13.22□□□□□ -0.29
CHD4-207ENST00000537634 ERVV-2B6SEH9 535 aa13.21□□□□□ -0.29
CHD4-207ENST00000537634 GNPATO15228 680 aa13.21□□□□□ -0.29
CHD4-207ENST00000537634 ITPK1Q13572 414 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms