RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SWT1Q5T5J6 900 aaKnown RBP10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 ZGPATQ8N5A5 531 aaKnown RBP10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 SPC24Q8NBT2 197 aa10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 ATG3Q9NT62 314 aa10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 ZNF215Q9UL58 517 aaPredicted RBP10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
SRGAP1-202ENST00000537556 GOLIM4O00461 696 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 MAGEA9P43362 315 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 FBXO18Q8NFZ0 1043 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 GTF3C6Q969F1 213 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 AK7Q96M32 723 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 RBM28Q9NW13 759 aaKnown RBP10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 MX1P20591 662 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 GSCP56915 257 aaPredicted RBP10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 C14orf37Q86TY3 774 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 BCL2L13Q9BXK5 485 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 SUFUQ9UMX1 484 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 ERBINQ96RT1 1412 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 KIAA0586Q9BVV6 1533 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 LRRIQ1Q96JM4 1722 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 U2SURPO15042 1029 aaKnown RBP10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 ZNF853P0CG23 659 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 ELF2Q15723 593 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 TESK2Q96S53 571 aa10.17□□□□□ -0.78
SRGAP1-202ENST00000537556 PTPRCP08575 1304 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 SLU7O95391 586 aaKnown RBP10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 BRD1O95696 1058 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 MAP2K1Q02750 393 aaPredicted RBP10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 WDR63Q8IWG1 891 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 SUGP1Q8IWZ8 645 aaKnown RBP10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 ZNF592Q92610 1267 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 ARGLU1Q9NWB6 273 aaPredicted RBP10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 FHOD1Q9Y613 1164 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 ABCC5O15440 1437 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 CCDC171Q6TFL3 1326 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 TMED8Q6PL24 325 aaPredicted RBP10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 RPAINQ86UA6 219 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 PPM1EQ8WY54 764 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 LCMT1Q9UIC8 334 aa10.16□□□□□ -0.78
SRGAP1-202ENST00000537556 PLEKHG2Q9H7P9 1386 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 IVLP07476 585 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 H2AFXP16104 143 aaPredicted RBP10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 PTGS1P23219 599 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 ITPRIPQ8IWB1 547 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 KDM5DQ9BY66 1539 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 CCDC141Q6ZP82 1450 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 ATP8B1O43520 1251 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 CT47B1P0C2W7 299 aaPredicted RBP10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 TRDNQ13061 729 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 DNMT1P26358 1616 aaKnown RBP10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 CFAP74Q9C0B2 1584 aa10.15□□□□□ -0.78
SRGAP1-202ENST00000537556 IQUBQ8NA54 791 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 CEP89Q96ST8 783 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 REREQ9P2R6 1566 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 MAP2K2P36507 400 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 MCM2P49736 904 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 SART3Q15020 963 aaKnown RBP10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 PTPN14Q15678 1187 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 FOXD4L5Q5VV16 416 aaPredicted RBP10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 MCTP2Q6DN12 878 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 ANKRD20A12PQ8NF67 263 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 FOXD4L4Q8WXT5 416 aaPredicted RBP10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 GCC1Q96CN9 775 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 CCDC196A0A1B0GTZ2 297 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 KIF2AO00139 706 aaPredicted RBP10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 POLR3GO15318 223 aaPredicted RBP10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 PLA2G4AP47712 749 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 CCDC186Q7Z3E2 898 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 DRC7Q8IY82 874 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 CHAMP1Q96JM3 812 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 PSD3Q9NYI0 1048 aa10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.14□□□□□ -0.79
SRGAP1-202ENST00000537556 TMCO3Q6UWJ1 677 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 TICAM2Q86XR7 235 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 SMARCE1Q969G3 411 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 ADAMTS12P58397 1594 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 KANK1Q14678 1352 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 ATAD2Q6PL18 1390 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 MAGI3Q5TCQ9 1506 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 USP48Q86UV5 1035 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 PLCD4Q9BRC7 762 aa10.13□□□□□ -0.79
SRGAP1-202ENST00000537556 PLB1Q6P1J6 1458 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 SYNMO15061 1565 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 PPP1R12AO14974 1030 aaPredicted RBP10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 ANKRD45Q5TZF3 282 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 LEKR1Q6ZMV7 388 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 USP26Q9BXU7 913 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 ZBTB40Q9NUA8 1239 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 ELP1O95163 1332 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 PRAG1Q86YV5 1406 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
SRGAP1-202ENST00000537556 GADD45BO75293 160 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms