RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 PAPPAQ13219 1627 aa7.52□□□□□ -1.2
SNHG1-204ENST00000537068 QSER1Q2KHR3 1735 aa7.52□□□□□ -1.2
SNHG1-204ENST00000537068 CHD4Q14839 1912 aa7.52□□□□□ -1.2
SNHG1-204ENST00000537068 ROCK2O75116 1388 aaKnown RBP7.52□□□□□ -1.21
SNHG1-204ENST00000537068 KTN1Q86UP2 1357 aaKnown RBP7.52□□□□□ -1.21
SNHG1-204ENST00000537068 EXOC5O00471 708 aa7.52□□□□□ -1.21
SNHG1-204ENST00000537068 PTGER2P43116 358 aa7.52□□□□□ -1.21
SNHG1-204ENST00000537068 PUS7Q96PZ0 661 aaKnown RBP7.52□□□□□ -1.21
SNHG1-204ENST00000537068 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.52□□□□□ -1.21
SNHG1-204ENST00000537068 BTAF1O14981 1849 aa7.52□□□□□ -1.21
SNHG1-204ENST00000537068 MYOM1P52179 1685 aa7.51□□□□□ -1.21
SNHG1-204ENST00000537068 TXNRD1Q16881 649 aa7.51□□□□□ -1.21
SNHG1-204ENST00000537068 PAXIP1Q6ZW49 1069 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-204ENST00000537068 CFAP44Q96MT7 982 aa7.51□□□□□ -1.21
SNHG1-204ENST00000537068 SGIP1Q9BQI5 828 aa7.51□□□□□ -1.21
SNHG1-204ENST00000537068 PDGFDQ9GZP0 370 aaPredicted RBP7.51□□□□□ -1.21
SNHG1-204ENST00000537068 TNS2Q63HR2 1409 aa7.51□□□□□ -1.21
SNHG1-204ENST00000537068 ERBB3P21860 1342 aa7.51□□□□□ -1.21
SNHG1-204ENST00000537068 FAM208AQ9UK61 1670 aaKnown RBP7.51□□□□□ -1.21
SNHG1-204ENST00000537068 ZBTB7CA1YPR0 619 aa7.5□□□□□ -1.21
SNHG1-204ENST00000537068 YY1P25490 414 aa7.5□□□□□ -1.21
SNHG1-204ENST00000537068 SLC15A2Q16348 729 aa7.5□□□□□ -1.21
SNHG1-204ENST00000537068 RGPD2P0DJD1 1756 aa7.49□□□□□ -1.21
SNHG1-204ENST00000537068 KAT6BQ8WYB5 2073 aa7.49□□□□□ -1.21
SNHG1-204ENST00000537068 PRR29P0C7W0 189 aa7.49□□□□□ -1.21
SNHG1-204ENST00000537068 CREBZFQ9NS37 354 aa7.49□□□□□ -1.21
SNHG1-204ENST00000537068 PPP1R1BQ9UD71 204 aaPredicted RBP7.49□□□□□ -1.21
SNHG1-204ENST00000537068 LY75O60449 1722 aa7.49□□□□□ -1.21
SNHG1-204ENST00000537068 SHANK3Q9BYB0 1731 aa7.49□□□□□ -1.21
SNHG1-204ENST00000537068 CSB-PGBD3P0DP91 1061 aa7.48□□□□□ -1.21
SNHG1-204ENST00000537068 IL2RBP14784 551 aa7.48□□□□□ -1.21
SNHG1-204ENST00000537068 NUBP1P53384 320 aa7.48□□□□□ -1.21
SNHG1-204ENST00000537068 NEUROD1Q13562 356 aa7.48□□□□□ -1.21
SNHG1-204ENST00000537068 EDC4Q6P2E9 1401 aaKnown RBP7.48□□□□□ -1.21
SNHG1-204ENST00000537068 SLC12A5Q9H2X9 1139 aa7.48□□□□□ -1.21
SNHG1-204ENST00000537068 TUBGCP6Q96RT7 1819 aa7.48□□□□□ -1.21
SNHG1-204ENST00000537068 NME9Q86XW9 330 aa7.47□□□□□ -1.21
SNHG1-204ENST00000537068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.47□□□□□ -1.21
SNHG1-204ENST00000537068 SYT17Q9BSW7 474 aa7.47□□□□□ -1.21
SNHG1-204ENST00000537068 MTFR1LQ9H019 292 aa7.47□□□□□ -1.21
SNHG1-204ENST00000537068 STK32BQ9NY57 414 aa7.47□□□□□ -1.21
SNHG1-204ENST00000537068 A0A1W2PP64 1363 aa7.46□□□□□ -1.21
SNHG1-204ENST00000537068 MAP3K5Q99683 1374 aa7.46□□□□□ -1.21
SNHG1-204ENST00000537068 SOX12O15370 315 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 ZBTB7AO95365 584 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 DCAF8Q5TAQ9 597 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 IP6K1Q92551 441 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 RNF25Q96BH1 459 aaPredicted RBP7.46□□□□□ -1.22
SNHG1-204ENST00000537068 TESK2Q96S53 571 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 CARD11Q9BXL7 1154 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 LRRC4BQ9NT99 713 aa7.46□□□□□ -1.22
SNHG1-204ENST00000537068 DOT1LQ8TEK3 1739 aa7.45□□□□□ -1.22
SNHG1-204ENST00000537068 GSE1Q14687 1217 aa7.45□□□□□ -1.22
SNHG1-204ENST00000537068 HDGFL2Q7Z4V5 671 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-204ENST00000537068 ANKRD24Q8TF21 1146 aa7.45□□□□□ -1.22
SNHG1-204ENST00000537068 ACSBG1Q96GR2 724 aa7.45□□□□□ -1.22
SNHG1-204ENST00000537068 FHDC1Q9C0D6 1143 aaPredicted RBP7.45□□□□□ -1.22
SNHG1-204ENST00000537068 NLRP2Q9NX02 1062 aa7.45□□□□□ -1.22
SNHG1-204ENST00000537068 TERF2IPQ9NYB0 399 aa7.45□□□□□ -1.22
SNHG1-204ENST00000537068 TAF1LQ8IZX4 1826 aa7.44□□□□□ -1.22
SNHG1-204ENST00000537068 MNX1P50219 401 aaPredicted RBP7.44□□□□□ -1.22
SNHG1-204ENST00000537068 ZNF827Q17R98 1081 aa7.44□□□□□ -1.22
SNHG1-204ENST00000537068 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
SNHG1-204ENST00000537068 SLC27A3Q5K4L6 730 aa7.43□□□□□ -1.22
SNHG1-204ENST00000537068 VSIG10Q8N0Z9 540 aa7.43□□□□□ -1.22
SNHG1-204ENST00000537068 TMC1Q8TDI8 760 aa7.43□□□□□ -1.22
SNHG1-204ENST00000537068 HOXC9P31274 260 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 CHADLQ6NUI6 762 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 ZNF784Q8NCA9 323 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-204ENST00000537068 SPRYD3Q8NCJ5 442 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 ARXQ96QS3 562 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 ITGB4P16144 1822 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 MAP3K19Q56UN5 1328 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 NSD2O96028 1365 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 ANKRD36BQ8N2N9 1353 aa7.42□□□□□ -1.22
SNHG1-204ENST00000537068 KIF20BQ96Q89 1820 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 ST20-MTHFSA0A0A6YYL1 179 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 FBLN1P23142 703 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 RASEFQ8IZ41 740 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 FAM212AQ96EL1 285 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 PNPLA7Q6ZV29 1317 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 UTRNP46939 3433 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 C5P01031 1676 aa7.41□□□□□ -1.22
SNHG1-204ENST00000537068 FYB1O15117 783 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 GABBR2O75899 941 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 PRIM1P49642 420 aaKnown RBP7.4□□□□□ -1.22
SNHG1-204ENST00000537068 NBPF6Q5VWK0 638 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 HS6ST3Q8IZP7 471 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 ZCRB1Q8TBF4 217 aaKnown RBP7.4□□□□□ -1.22
SNHG1-204ENST00000537068 DDX54Q8TDD1 881 aaKnown RBP7.4□□□□□ -1.22
SNHG1-204ENST00000537068 COG3Q96JB2 828 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 NBPF4Q96M43 638 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 TSHZ2Q9NRE2 1034 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 CGNL1Q0VF96 1302 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 RTL1A6NKG5 1358 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 TONSLQ96HA7 1378 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 MEGF6O75095 1541 aa7.4□□□□□ -1.22
SNHG1-204ENST00000537068 MAP2P11137 1827 aaKnown RBP7.4□□□□□ -1.23
SNHG1-204ENST00000537068 PKD1L3Q7Z443 1732 aa7.39□□□□□ -1.23
SNHG1-204ENST00000537068 ANKRD26Q9UPS8 1709 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms