RNA–Protein interactions for RNA: ENST00000537022.5

COPS7A-206, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 4

Gene COPS7A, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-206ENST00000537022 SLC16A10Q8TF71 515 aa19.22■□□□□ 0.67
COPS7A-206ENST00000537022 ARXQ96QS3 562 aa19.22■□□□□ 0.67
COPS7A-206ENST00000537022 NSD2O96028 1365 aa19.21■□□□□ 0.67
COPS7A-206ENST00000537022 USP47Q96K76 1375 aa19.21■□□□□ 0.67
COPS7A-206ENST00000537022 TMF1P82094 1093 aa19.21■□□□□ 0.67
COPS7A-206ENST00000537022 SMG6Q86US8 1419 aaKnown RBP19.21■□□□□ 0.67
COPS7A-206ENST00000537022 ZCRB1Q8TBF4 217 aaKnown RBP19.21■□□□□ 0.67
COPS7A-206ENST00000537022 CGNL1Q0VF96 1302 aa19.21■□□□□ 0.67
COPS7A-206ENST00000537022 UTRNP46939 3433 aa19.21■□□□□ 0.66
COPS7A-206ENST00000537022 FYB1O15117 783 aa19.2■□□□□ 0.66
COPS7A-206ENST00000537022 KIF24Q5T7B8 1368 aa19.19■□□□□ 0.66
COPS7A-206ENST00000537022 FBLN1P23142 703 aa19.19■□□□□ 0.66
COPS7A-206ENST00000537022 ANKRD26Q9UPS8 1709 aa19.18■□□□□ 0.66
COPS7A-206ENST00000537022 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
COPS7A-206ENST00000537022 SYTL4Q96C24 671 aaPredicted RBP19.18■□□□□ 0.66
COPS7A-206ENST00000537022 C5P01031 1676 aa19.17■□□□□ 0.66
COPS7A-206ENST00000537022 TAF1LQ8IZX4 1826 aa19.17■□□□□ 0.66
COPS7A-206ENST00000537022 RRS1Q15050 365 aaKnown RBP19.17■□□□□ 0.66
COPS7A-206ENST00000537022 CDCA8Q53HL2 280 aa19.17■□□□□ 0.66
COPS7A-206ENST00000537022 GGNBP2Q9H3C7 697 aa19.17■□□□□ 0.66
COPS7A-206ENST00000537022 PNPLA7Q6ZV29 1317 aa19.17■□□□□ 0.66
COPS7A-206ENST00000537022 INSRP06213 1382 aa19.17■□□□□ 0.66
COPS7A-206ENST00000537022 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
COPS7A-206ENST00000537022 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
COPS7A-206ENST00000537022 PKD1L3Q7Z443 1732 aa19.16■□□□□ 0.66
COPS7A-206ENST00000537022 FLT4P35916 1363 aa19.16■□□□□ 0.66
COPS7A-206ENST00000537022 ITGB4P16144 1822 aa19.16■□□□□ 0.66
COPS7A-206ENST00000537022 POLD1P28340 1107 aa19.14■□□□□ 0.65
COPS7A-206ENST00000537022 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
COPS7A-206ENST00000537022 TFCP2L1Q9NZI6 479 aa19.14■□□□□ 0.65
COPS7A-206ENST00000537022 TOGARAM1Q9Y4F4 1720 aa19.13■□□□□ 0.65
COPS7A-206ENST00000537022 MAP2P11137 1827 aaKnown RBP19.12■□□□□ 0.65
COPS7A-206ENST00000537022 PCDH11XQ9BZA7 1347 aa19.12■□□□□ 0.65
COPS7A-206ENST00000537022 PCDH11YQ9BZA8 1340 aa19.12■□□□□ 0.65
COPS7A-206ENST00000537022 TATP17735 454 aaPredicted RBP19.12■□□□□ 0.65
COPS7A-206ENST00000537022 ZNF784Q8NCA9 323 aaPredicted RBP19.12■□□□□ 0.65
COPS7A-206ENST00000537022 CCNL1Q9UK58 526 aaPredicted RBP19.12■□□□□ 0.65
COPS7A-206ENST00000537022 HMGB2P26583 209 aaKnown RBP19.11■□□□□ 0.65
COPS7A-206ENST00000537022 KCNQ4P56696 695 aa19.11■□□□□ 0.65
COPS7A-206ENST00000537022 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
COPS7A-206ENST00000537022 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
COPS7A-206ENST00000537022 HSP90AB2PQ58FF8 381 aa19.1■□□□□ 0.65
COPS7A-206ENST00000537022 NCAPD2Q15021 1401 aa19.09■□□□□ 0.65
COPS7A-206ENST00000537022 NSD3Q9BZ95 1437 aa19.08■□□□□ 0.65
COPS7A-206ENST00000537022 C4BP0C0L5 1744 aa19.06■□□□□ 0.64
COPS7A-206ENST00000537022 UBR3Q6ZT12 1888 aa19.06■□□□□ 0.64
COPS7A-206ENST00000537022 GPR162Q16538 588 aa19.06■□□□□ 0.64
COPS7A-206ENST00000537022 CARD14Q9BXL6 1004 aa19.06■□□□□ 0.64
COPS7A-206ENST00000537022 TIMELESSQ9UNS1 1208 aa19.06■□□□□ 0.64
COPS7A-206ENST00000537022 PALLDQ8WX93 1383 aa19.05■□□□□ 0.64
COPS7A-206ENST00000537022 CYP27B1O15528 508 aa19.04■□□□□ 0.64
COPS7A-206ENST00000537022 COL23A1Q86Y22 540 aaPredicted RBP19.04■□□□□ 0.64
COPS7A-206ENST00000537022 KLHL34Q8N239 644 aa19.04■□□□□ 0.64
COPS7A-206ENST00000537022 EMILIN1Q9Y6C2 1016 aa19.04■□□□□ 0.64
COPS7A-206ENST00000537022 GOLGB1Q14789 3259 aaKnown RBP19.04■□□□□ 0.64
COPS7A-206ENST00000537022 FLAD1Q8NFF5 587 aa19.03■□□□□ 0.64
COPS7A-206ENST00000537022 WASHC2AQ641Q2 1341 aa19.01■□□□□ 0.63
COPS7A-206ENST00000537022 MSH5O43196 834 aa19.01■□□□□ 0.63
COPS7A-206ENST00000537022 MPRIPQ6WCQ1 1025 aa19.01■□□□□ 0.63
COPS7A-206ENST00000537022 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
COPS7A-206ENST00000537022 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
COPS7A-206ENST00000537022 NKX1-1Q15270 411 aaPredicted RBP19■□□□□ 0.63
COPS7A-206ENST00000537022 PLEKHG2Q9H7P9 1386 aa19■□□□□ 0.63
COPS7A-206ENST00000537022 CLSPNQ9HAW4 1339 aa19■□□□□ 0.63
COPS7A-206ENST00000537022 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.99■□□□□ 0.63
COPS7A-206ENST00000537022 SPG7Q9UQ90 795 aa18.99■□□□□ 0.63
COPS7A-206ENST00000537022 GRIN3BO60391 1043 aa18.97■□□□□ 0.63
COPS7A-206ENST00000537022 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
COPS7A-206ENST00000537022 PPM1GO15355 546 aaPredicted RBP18.96■□□□□ 0.63
COPS7A-206ENST00000537022 MSL1Q68DK7 614 aa18.96■□□□□ 0.63
COPS7A-206ENST00000537022 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
COPS7A-206ENST00000537022 ZNF831Q5JPB2 1677 aa18.95■□□□□ 0.62
COPS7A-206ENST00000537022 C1QTNF8P60827 252 aa18.95■□□□□ 0.62
COPS7A-206ENST00000537022 PIGBQ92521 554 aa18.95■□□□□ 0.62
COPS7A-206ENST00000537022 EYA1Q99502 592 aa18.95■□□□□ 0.62
COPS7A-206ENST00000537022 YBX3P16989 372 aaKnown RBP eCLIP18.94■□□□□ 0.62
COPS7A-206ENST00000537022 AK7Q96M32 723 aa18.94■□□□□ 0.62
COPS7A-206ENST00000537022 POLKQ9UBT6 870 aa18.94■□□□□ 0.62
COPS7A-206ENST00000537022 IFNL2Q8IZJ0 200 aa18.92■□□□□ 0.62
COPS7A-206ENST00000537022 TMOD3Q9NYL9 352 aa18.92■□□□□ 0.62
COPS7A-206ENST00000537022 LOC102724428A0A0B4J2F2 783 aa18.91■□□□□ 0.62
COPS7A-206ENST00000537022 PHKG2P15735 406 aa18.91■□□□□ 0.62
COPS7A-206ENST00000537022 SSFA2P28290 1259 aa18.91■□□□□ 0.62
COPS7A-206ENST00000537022 SIK1P57059 783 aa18.91■□□□□ 0.62
COPS7A-206ENST00000537022 AMIGO3Q86WK7 504 aa18.9■□□□□ 0.62
COPS7A-206ENST00000537022 COL5A3P25940 1745 aaPredicted RBP18.9■□□□□ 0.62
COPS7A-206ENST00000537022 KIF13BQ9NQT8 1826 aa18.9■□□□□ 0.62
COPS7A-206ENST00000537022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.89■□□□□ 0.61
COPS7A-206ENST00000537022 GIGYF1O75420 1035 aaPredicted RBP18.89■□□□□ 0.61
COPS7A-206ENST00000537022 EIF4A2Q14240 407 aaKnown RBP18.89■□□□□ 0.61
COPS7A-206ENST00000537022 SENP3-EIF4A1A0A087X0R7 540 aa18.88■□□□□ 0.61
COPS7A-206ENST00000537022 LINC00116Q8NCU8 138 aa18.88■□□□□ 0.61
COPS7A-206ENST00000537022 IGSF1Q8N6C5 1336 aa18.88■□□□□ 0.61
COPS7A-206ENST00000537022 PHF14O94880 888 aa18.87■□□□□ 0.61
COPS7A-206ENST00000537022 ASAP1Q9ULH1 1129 aa18.87■□□□□ 0.61
COPS7A-206ENST00000537022 KDRP35968 1356 aa18.86■□□□□ 0.61
COPS7A-206ENST00000537022 ATP6V1AP38606 617 aa18.85■□□□□ 0.61
COPS7A-206ENST00000537022 EIF4G2P78344 907 aaKnown RBP eCLIP18.85■□□□□ 0.61
COPS7A-206ENST00000537022 ITPK1Q13572 414 aa18.85■□□□□ 0.61
COPS7A-206ENST00000537022 POLR3GLQ9BT43 218 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms