RNA–Protein interactions for RNA: ENST00000536723.5

USP30-209, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-209ENST00000536723 LTV1Q96GA3 475 aaPredicted RBP26.8■■□□□ 1.88
USP30-209ENST00000536723 LTN1O94822 1766 aa26.79■■□□□ 1.88
USP30-209ENST00000536723 LY75O60449 1722 aa26.79■■□□□ 1.88
USP30-209ENST00000536723 IP6K1Q92551 441 aa26.78■■□□□ 1.88
USP30-209ENST00000536723 MON2Q7Z3U7 1717 aa26.78■■□□□ 1.88
USP30-209ENST00000536723 USP54Q70EL1 1684 aa26.77■■□□□ 1.88
USP30-209ENST00000536723 L3MBTL2Q969R5 705 aa26.77■■□□□ 1.88
USP30-209ENST00000536723 CD163L1Q9NR16 1453 aa26.75■■□□□ 1.87
USP30-209ENST00000536723 KIF3CO14782 793 aa26.75■■□□□ 1.87
USP30-209ENST00000536723 ZCRB1Q8TBF4 217 aaKnown RBP26.75■■□□□ 1.87
USP30-209ENST00000536723 USP47Q96K76 1375 aa26.74■■□□□ 1.87
USP30-209ENST00000536723 DOT1LQ8TEK3 1739 aa26.73■■□□□ 1.87
USP30-209ENST00000536723 WWC3Q9ULE0 1092 aa26.73■■□□□ 1.87
USP30-209ENST00000536723 TMC1Q8TDI8 760 aa26.72■■□□□ 1.87
USP30-209ENST00000536723 ROCK2O75116 1388 aaKnown RBP26.71■■□□□ 1.87
USP30-209ENST00000536723 HDGFL2Q7Z4V5 671 aaPredicted RBP26.7■■□□□ 1.86
USP30-209ENST00000536723 IGSF1Q8N6C5 1336 aa26.69■■□□□ 1.86
USP30-209ENST00000536723 APLP1P51693 650 aa26.69■■□□□ 1.86
USP30-209ENST00000536723 FLAD1Q8NFF5 587 aa26.69■■□□□ 1.86
USP30-209ENST00000536723 SLC12A5Q9H2X9 1139 aa26.69■■□□□ 1.86
USP30-209ENST00000536723 DNAJC5GQ8N7S2 189 aa26.68■■□□□ 1.86
USP30-209ENST00000536723 EDC4Q6P2E9 1401 aaKnown RBP26.66■■□□□ 1.86
USP30-209ENST00000536723 MEGF6O75095 1541 aa26.66■■□□□ 1.86
USP30-209ENST00000536723 HOXC9P31274 260 aa26.64■■□□□ 1.86
USP30-209ENST00000536723 MAP3K19Q56UN5 1328 aa26.64■■□□□ 1.85
USP30-209ENST00000536723 FAM208AQ9UK61 1670 aaKnown RBP26.63■■□□□ 1.85
USP30-209ENST00000536723 AMIGO3Q86WK7 504 aa26.63■■□□□ 1.85
USP30-209ENST00000536723 FBLN1P23142 703 aa26.62■■□□□ 1.85
USP30-209ENST00000536723 SMIM5Q71RC9 77 aa26.61■■□□□ 1.85
USP30-209ENST00000536723 TERF2IPQ9NYB0 399 aa26.61■■□□□ 1.85
USP30-209ENST00000536723 C5P01031 1676 aa26.6■■□□□ 1.85
USP30-209ENST00000536723 A0A1W2PP64 1363 aa26.6■■□□□ 1.85
USP30-209ENST00000536723 PALLDQ8WX93 1383 aa26.6■■□□□ 1.85
USP30-209ENST00000536723 HMGB2P26583 209 aaKnown RBP26.6■■□□□ 1.85
USP30-209ENST00000536723 AMPHP49418 695 aa26.6■■□□□ 1.85
USP30-209ENST00000536723 TOMM70O94826 608 aa26.59■■□□□ 1.85
USP30-209ENST00000536723 NBPF6Q5VWK0 638 aa26.58■■□□□ 1.85
USP30-209ENST00000536723 AK7Q96M32 723 aa26.58■■□□□ 1.85
USP30-209ENST00000536723 NBPF4Q96M43 638 aa26.58■■□□□ 1.85
USP30-209ENST00000536723 PHF14O94880 888 aa26.57■■□□□ 1.84
USP30-209ENST00000536723 MPRIPQ6WCQ1 1025 aa26.57■■□□□ 1.84
USP30-209ENST00000536723 USHBP1Q8N6Y0 703 aa26.56■■□□□ 1.84
USP30-209ENST00000536723 CGNL1Q0VF96 1302 aa26.56■■□□□ 1.84
USP30-209ENST00000536723 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.55■■□□□ 1.84
USP30-209ENST00000536723 COG3Q96JB2 828 aa26.55■■□□□ 1.84
USP30-209ENST00000536723 SIN3AQ96ST3 1273 aa26.55■■□□□ 1.84
USP30-209ENST00000536723 RAPGEF4Q8WZA2 1011 aa26.54■■□□□ 1.84
USP30-209ENST00000536723 RGPD2P0DJD1 1756 aa26.53■■□□□ 1.84
USP30-209ENST00000536723 COL13A1Q5TAT6 717 aaPredicted RBP26.53■■□□□ 1.84
USP30-209ENST00000536723 C4BP0C0L5 1744 aa26.51■■□□□ 1.83
USP30-209ENST00000536723 TAF1LQ8IZX4 1826 aa26.51■■□□□ 1.83
USP30-209ENST00000536723 TATP17735 454 aaPredicted RBP26.5■■□□□ 1.83
USP30-209ENST00000536723 SMARCC1Q92922 1105 aaPredicted RBP26.5■■□□□ 1.83
USP30-209ENST00000536723 NMRK2Q9NPI5 230 aa26.5■■□□□ 1.83
USP30-209ENST00000536723 CICQ96RK0 1608 aaPredicted RBP26.5■■□□□ 1.83
USP30-209ENST00000536723 PCDH11XQ9BZA7 1347 aa26.49■■□□□ 1.83
USP30-209ENST00000536723 PCDH11YQ9BZA8 1340 aa26.49■■□□□ 1.83
USP30-209ENST00000536723 TOGARAM1Q9Y4F4 1720 aa26.49■■□□□ 1.83
USP30-209ENST00000536723 CAPN15O75808 1086 aa26.48■■□□□ 1.83
USP30-209ENST00000536723 SSFA2P28290 1259 aa26.48■■□□□ 1.83
USP30-209ENST00000536723 NEUROD1Q13562 356 aa26.48■■□□□ 1.83
USP30-209ENST00000536723 RRS1Q15050 365 aaKnown RBP26.48■■□□□ 1.83
USP30-209ENST00000536723 CYP27B1O15528 508 aa26.47■■□□□ 1.83
USP30-209ENST00000536723 HTRA3P83110 453 aa26.47■■□□□ 1.83
USP30-209ENST00000536723 CARD11Q9BXL7 1154 aa26.47■■□□□ 1.83
USP30-209ENST00000536723 KLRG1Q96E93 195 aa26.46■■□□□ 1.83
USP30-209ENST00000536723 PUS7Q96PZ0 661 aaKnown RBP26.46■■□□□ 1.83
USP30-209ENST00000536723 NSD3Q9BZ95 1437 aa26.46■■□□□ 1.83
USP30-209ENST00000536723 LINC00116Q8NCU8 138 aa26.45■■□□□ 1.82
USP30-209ENST00000536723 PIGBQ92521 554 aa26.45■■□□□ 1.82
USP30-209ENST00000536723 BCS1LQ9Y276 419 aa26.45■■□□□ 1.82
USP30-209ENST00000536723 RTL1A6NKG5 1358 aa26.45■■□□□ 1.82
USP30-209ENST00000536723 JMYQ8N9B5 988 aa26.44■■□□□ 1.82
USP30-209ENST00000536723 UBR3Q6ZT12 1888 aa26.44■■□□□ 1.82
USP30-209ENST00000536723 PXDNLA1KZ92 1463 aa26.43■■□□□ 1.82
USP30-209ENST00000536723 MMP10P09238 476 aa26.43■■□□□ 1.82
USP30-209ENST00000536723 ARHGAP27Q6ZUM4 889 aa26.43■■□□□ 1.82
USP30-209ENST00000536723 RBM46Q8TBY0 533 aaKnown RBP26.43■■□□□ 1.82
USP30-209ENST00000536723 A0A0G2JLW4 131 aa26.42■■□□□ 1.82
USP30-209ENST00000536723 LOC102724428A0A0B4J2F2 783 aa26.41■■□□□ 1.82
USP30-209ENST00000536723 SIK1P57059 783 aa26.41■■□□□ 1.82
USP30-209ENST00000536723 TGFB2P61812 414 aa26.41■■□□□ 1.82
USP30-209ENST00000536723 SMG6Q86US8 1419 aaKnown RBP26.4■■□□□ 1.82
USP30-209ENST00000536723 GNPATO15228 680 aa26.4■■□□□ 1.82
USP30-209ENST00000536723 HSP90AB2PQ58FF8 381 aa26.4■■□□□ 1.82
USP30-209ENST00000536723 WDR90Q96KV7 1748 aa26.39■■□□□ 1.81
USP30-209ENST00000536723 TNS4Q8IZW8 715 aa26.38■■□□□ 1.81
USP30-209ENST00000536723 ITPK1Q13572 414 aa26.37■■□□□ 1.81
USP30-209ENST00000536723 C16orf71Q8IYS4 520 aaPredicted RBP26.37■■□□□ 1.81
USP30-209ENST00000536723 PRELPP51888 382 aa26.36■■□□□ 1.81
USP30-209ENST00000536723 FSTL1Q12841 308 aa26.36■■□□□ 1.81
USP30-209ENST00000536723 GGNBP2Q9H3C7 697 aa26.36■■□□□ 1.81
USP30-209ENST00000536723 INSRP06213 1382 aa26.35■■□□□ 1.81
USP30-209ENST00000536723 FYB1O15117 783 aa26.35■■□□□ 1.81
USP30-209ENST00000536723 FCHSD2O94868 740 aa26.35■■□□□ 1.81
USP30-209ENST00000536723 DPEP1P16444 411 aa26.35■■□□□ 1.81
USP30-209ENST00000536723 NKX1-1Q15270 411 aaPredicted RBP26.35■■□□□ 1.81
USP30-209ENST00000536723 ATP6V1AP38606 617 aa26.34■■□□□ 1.81
USP30-209ENST00000536723 C9orf131Q5VYM1 1079 aa26.34■■□□□ 1.81
USP30-209ENST00000536723 ITGB4P16144 1822 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms