RNA–Protein interactions for RNA: ENST00000536582.5

PAAF1-208, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 2

Gene PAAF1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-208ENST00000536582 ANKRD24Q8TF21 1146 aa12.96□□□□□ -0.33
PAAF1-208ENST00000536582 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
PAAF1-208ENST00000536582 BTG4Q9NY30 223 aa12.96□□□□□ -0.33
PAAF1-208ENST00000536582 CDK12Q9NYV4 1490 aaPredicted RBP12.96□□□□□ -0.34
PAAF1-208ENST00000536582 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.34
PAAF1-208ENST00000536582 CAMTA1Q9Y6Y1 1673 aa12.96□□□□□ -0.34
PAAF1-208ENST00000536582 COL14A1Q05707 1796 aaKnown RBP12.95□□□□□ -0.34
PAAF1-208ENST00000536582 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
PAAF1-208ENST00000536582 RTL1A6NKG5 1358 aa12.94□□□□□ -0.34
PAAF1-208ENST00000536582 INSRP06213 1382 aa12.94□□□□□ -0.34
PAAF1-208ENST00000536582 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
PAAF1-208ENST00000536582 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
PAAF1-208ENST00000536582 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
PAAF1-208ENST00000536582 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
PAAF1-208ENST00000536582 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
PAAF1-208ENST00000536582 IL13P35225 146 aa12.93□□□□□ -0.34
PAAF1-208ENST00000536582 USHBP1Q8N6Y0 703 aa12.93□□□□□ -0.34
PAAF1-208ENST00000536582 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
PAAF1-208ENST00000536582 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
PAAF1-208ENST00000536582 HMOX1P09601 288 aa12.92□□□□□ -0.34
PAAF1-208ENST00000536582 U2AF1L5P0DN76 240 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-208ENST00000536582 BLMP54132 1417 aaPredicted RBP12.92□□□□□ -0.34
PAAF1-208ENST00000536582 U2AF1Q01081 240 aaKnown RBP eCLIP12.92□□□□□ -0.34
PAAF1-208ENST00000536582 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
PAAF1-208ENST00000536582 LARP1Q6PKG0 1096 aaKnown RBP12.92□□□□□ -0.34
PAAF1-208ENST00000536582 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
PAAF1-208ENST00000536582 NUDCQ9Y266 331 aa12.92□□□□□ -0.34
PAAF1-208ENST00000536582 SENP3-EIF4A1A0A087X0R7 540 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 NBPF6Q5VWK0 638 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 TOM1L2Q6ZVM7 507 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 NBPF4Q96M43 638 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 EYA1Q99502 592 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 CCDC9Q9Y3X0 531 aaKnown RBP12.91□□□□□ -0.34
PAAF1-208ENST00000536582 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
PAAF1-208ENST00000536582 ERBB3P21860 1342 aa12.9□□□□□ -0.34
PAAF1-208ENST00000536582 AFF2P51816 1311 aa12.9□□□□□ -0.34
PAAF1-208ENST00000536582 USP21Q9UK80 565 aa12.9□□□□□ -0.34
PAAF1-208ENST00000536582 ADAMTS8Q9UP79 889 aa12.9□□□□□ -0.34
PAAF1-208ENST00000536582 COL5A2P05997 1499 aaPredicted RBP12.9□□□□□ -0.34
PAAF1-208ENST00000536582 PYGBP11216 843 aa12.89□□□□□ -0.35
PAAF1-208ENST00000536582 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
PAAF1-208ENST00000536582 SULT6B1Q6IMI4 303 aa12.89□□□□□ -0.35
PAAF1-208ENST00000536582 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
PAAF1-208ENST00000536582 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 SLIT2O94813 1529 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 ABCC6O95255 1503 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 UNC5CLQ8IV45 518 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 CCDC146Q8IYE0 955 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
PAAF1-208ENST00000536582 NRAPQ86VF7 1730 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
PAAF1-208ENST00000536582 BCL9LQ86UU0 1499 aa12.86□□□□□ -0.35
PAAF1-208ENST00000536582 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
PAAF1-208ENST00000536582 ATMINO43313 823 aaPredicted RBP12.86□□□□□ -0.35
PAAF1-208ENST00000536582 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
PAAF1-208ENST00000536582 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
PAAF1-208ENST00000536582 IGSF1Q8N6C5 1336 aa12.86□□□□□ -0.35
PAAF1-208ENST00000536582 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-208ENST00000536582 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
PAAF1-208ENST00000536582 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
PAAF1-208ENST00000536582 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
PAAF1-208ENST00000536582 CRB1P82279 1406 aa12.85□□□□□ -0.35
PAAF1-208ENST00000536582 TIE1P35590 1138 aa12.84□□□□□ -0.35
PAAF1-208ENST00000536582 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
PAAF1-208ENST00000536582 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-208ENST00000536582 VPS72Q15906 364 aa12.83□□□□□ -0.36
PAAF1-208ENST00000536582 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
PAAF1-208ENST00000536582 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
PAAF1-208ENST00000536582 SPATA31A1Q5TZJ5 1347 aa12.83□□□□□ -0.36
PAAF1-208ENST00000536582 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
PAAF1-208ENST00000536582 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
PAAF1-208ENST00000536582 FCHSD2O94868 740 aa12.82□□□□□ -0.36
PAAF1-208ENST00000536582 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
PAAF1-208ENST00000536582 RAPGEF4Q8WZA2 1011 aa12.82□□□□□ -0.36
PAAF1-208ENST00000536582 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
PAAF1-208ENST00000536582 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
PAAF1-208ENST00000536582 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
PAAF1-208ENST00000536582 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
PAAF1-208ENST00000536582 TATP17735 454 aaPredicted RBP12.81□□□□□ -0.36
PAAF1-208ENST00000536582 FAM98CQ17RN3 349 aaKnown RBP12.81□□□□□ -0.36
PAAF1-208ENST00000536582 RUNDC1Q96C34 613 aa12.81□□□□□ -0.36
PAAF1-208ENST00000536582 TRPC5Q9UL62 973 aaPredicted RBP12.81□□□□□ -0.36
PAAF1-208ENST00000536582 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
PAAF1-208ENST00000536582 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.81□□□□□ -0.36
PAAF1-208ENST00000536582 A0A0G2JS52 829 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 APAF1O14727 1248 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 NEFMP07197 916 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 IL2RBP14784 551 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 MYT1Q01538 1121 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 NEUROD2Q15784 382 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-208ENST00000536582 PLEKHF1Q96S99 279 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
PAAF1-208ENST00000536582 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 KDRP35968 1356 aa12.8□□□□□ -0.36
PAAF1-208ENST00000536582 ATRNO75882 1429 aa12.79□□□□□ -0.36
PAAF1-208ENST00000536582 MEGF6O75095 1541 aa12.79□□□□□ -0.36
PAAF1-208ENST00000536582 ATN1P54259 1190 aaPredicted RBP12.79□□□□□ -0.36
PAAF1-208ENST00000536582 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms