RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 L1TD1Q5T7N2 865 aaKnown RBP9.99□□□□□ -0.81
CPSF7-216ENST00000536548 PRAM1Q96QH2 718 aa9.99□□□□□ -0.81
CPSF7-216ENST00000536548 PRR36Q9H6K5 1346 aa9.99□□□□□ -0.81
CPSF7-216ENST00000536548 GOLGA2Q08379 1002 aa9.98□□□□□ -0.81
CPSF7-216ENST00000536548 DDB1Q16531 1140 aa9.98□□□□□ -0.81
CPSF7-216ENST00000536548 C8orf34Q49A92 452 aa9.98□□□□□ -0.81
CPSF7-216ENST00000536548 CDCA8Q53HL2 280 aa9.98□□□□□ -0.81
CPSF7-216ENST00000536548 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-216ENST00000536548 NGDNQ8NEJ9 315 aaKnown RBP9.98□□□□□ -0.81
CPSF7-216ENST00000536548 THRAP3Q9Y2W1 955 aaKnown RBP9.98□□□□□ -0.81
CPSF7-216ENST00000536548 LMO7Q8WWI1 1683 aa9.98□□□□□ -0.81
CPSF7-216ENST00000536548 ANKARQ7Z5J8 1434 aa9.98□□□□□ -0.81
CPSF7-216ENST00000536548 GRIN3BO60391 1043 aa9.97□□□□□ -0.81
CPSF7-216ENST00000536548 APLP1P51693 650 aa9.97□□□□□ -0.81
CPSF7-216ENST00000536548 ZNF827Q17R98 1081 aa9.97□□□□□ -0.81
CPSF7-216ENST00000536548 SIRT1Q96EB6 747 aa9.97□□□□□ -0.81
CPSF7-216ENST00000536548 MAPK8IP3Q9UPT6 1336 aa9.97□□□□□ -0.81
CPSF7-216ENST00000536548 AKAP12Q02952 1782 aa9.96□□□□□ -0.81
CPSF7-216ENST00000536548 KIF3CO14782 793 aa9.96□□□□□ -0.82
CPSF7-216ENST00000536548 HTRA3P83110 453 aa9.96□□□□□ -0.82
CPSF7-216ENST00000536548 AAMPQ13685 434 aa9.96□□□□□ -0.82
CPSF7-216ENST00000536548 CC2D1BQ5T0F9 858 aaKnown RBP9.96□□□□□ -0.82
CPSF7-216ENST00000536548 PANK3Q9H999 370 aa9.96□□□□□ -0.82
CPSF7-216ENST00000536548 TOPAZ1Q8N9V7 1692 aa9.96□□□□□ -0.82
CPSF7-216ENST00000536548 DUSP27Q5VZP5 1158 aa9.95□□□□□ -0.82
CPSF7-216ENST00000536548 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-216ENST00000536548 ADCY9O60503 1353 aa9.95□□□□□ -0.82
CPSF7-216ENST00000536548 PIK3C2GO75747 1445 aa9.95□□□□□ -0.82
CPSF7-216ENST00000536548 COL5A2P05997 1499 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-216ENST00000536548 PAPPAQ13219 1627 aa9.95□□□□□ -0.82
CPSF7-216ENST00000536548 COL24A1Q17RW2 1714 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 NPC1L1Q9UHC9 1359 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 CGNL1Q0VF96 1302 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 ZNF521Q96K83 1311 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 POLD1P28340 1107 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 TESK2Q96S53 571 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 POGKQ9P215 609 aa9.94□□□□□ -0.82
CPSF7-216ENST00000536548 CRB1P82279 1406 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 SLFN5Q08AF3 891 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 C20orf194Q5TEA3 1177 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 KNSTRNQ9Y448 316 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 WDR90Q96KV7 1748 aa9.93□□□□□ -0.82
CPSF7-216ENST00000536548 AATKQ6ZMQ8 1374 aa9.92□□□□□ -0.82
CPSF7-216ENST00000536548 MINK1Q8N4C8 1332 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-216ENST00000536548 ZBTB7CA1YPR0 619 aa9.92□□□□□ -0.82
CPSF7-216ENST00000536548 FRAT2O75474 233 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-216ENST00000536548 PPP2R1AP30153 589 aa9.92□□□□□ -0.82
CPSF7-216ENST00000536548 SLC4A3P48751 1232 aa9.92□□□□□ -0.82
CPSF7-216ENST00000536548 CFAP70Q5T0N1 1121 aa9.92□□□□□ -0.82
CPSF7-216ENST00000536548 UPF2Q9HAU5 1272 aaKnown RBP9.92□□□□□ -0.82
CPSF7-216ENST00000536548 LRRC4BQ9NT99 713 aa9.92□□□□□ -0.82
CPSF7-216ENST00000536548 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
CPSF7-216ENST00000536548 E9PSI1 815 aa9.91□□□□□ -0.82
CPSF7-216ENST00000536548 RGS3P49796 1198 aa9.91□□□□□ -0.82
CPSF7-216ENST00000536548 PDE3AQ14432 1141 aa9.91□□□□□ -0.82
CPSF7-216ENST00000536548 TRMT2AQ8IZ69 625 aaKnown RBP9.91□□□□□ -0.82
CPSF7-216ENST00000536548 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
CPSF7-216ENST00000536548 C14orf93Q9H972 538 aaKnown RBP9.91□□□□□ -0.82
CPSF7-216ENST00000536548 TULP4Q9NRJ4 1543 aa9.91□□□□□ -0.82
CPSF7-216ENST00000536548 BCL9O00512 1426 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 CPDO75976 1380 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.82
CPSF7-216ENST00000536548 TOM1L2Q6ZVM7 507 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 JMYQ8N9B5 988 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 KLRG1Q96E93 195 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 WWC3Q9ULE0 1092 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 TUBGCP6Q96RT7 1819 aa9.9□□□□□ -0.82
CPSF7-216ENST00000536548 PNPLA7Q6ZV29 1317 aa9.89□□□□□ -0.83
CPSF7-216ENST00000536548 WASLO00401 505 aaPredicted RBP9.89□□□□□ -0.83
CPSF7-216ENST00000536548 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
CPSF7-216ENST00000536548 GLIPR1L2Q4G1C9 344 aa9.89□□□□□ -0.83
CPSF7-216ENST00000536548 ABTB2Q8N961 1025 aa9.89□□□□□ -0.83
CPSF7-216ENST00000536548 SLC16A10Q8TF71 515 aa9.89□□□□□ -0.83
CPSF7-216ENST00000536548 AKT1S1Q96B36 256 aa9.89□□□□□ -0.83
CPSF7-216ENST00000536548 KAT6BQ8WYB5 2073 aa9.88□□□□□ -0.83
CPSF7-216ENST00000536548 NHSQ6T4R5 1651 aa9.88□□□□□ -0.83
CPSF7-216ENST00000536548 GCP02774 474 aa9.88□□□□□ -0.83
CPSF7-216ENST00000536548 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
CPSF7-216ENST00000536548 TRAK1Q9UPV9 953 aa9.88□□□□□ -0.83
CPSF7-216ENST00000536548 BTAF1O14981 1849 aa9.88□□□□□ -0.83
CPSF7-216ENST00000536548 VIRMAQ69YN4 1812 aaKnown RBP9.88□□□□□ -0.83
CPSF7-216ENST00000536548 QSER1Q2KHR3 1735 aa9.87□□□□□ -0.83
CPSF7-216ENST00000536548 TOMM70O94826 608 aa9.87□□□□□ -0.83
CPSF7-216ENST00000536548 KCNQ4P56696 695 aa9.87□□□□□ -0.83
CPSF7-216ENST00000536548 PCDH10Q9P2E7 1040 aa9.87□□□□□ -0.83
CPSF7-216ENST00000536548 ITSN1Q15811 1721 aa9.87□□□□□ -0.83
CPSF7-216ENST00000536548 ARHGEF28Q8N1W1 1705 aaKnown RBP9.87□□□□□ -0.83
CPSF7-216ENST00000536548 USP19O94966 1318 aa9.86□□□□□ -0.83
CPSF7-216ENST00000536548 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
CPSF7-216ENST00000536548 CLUAP1Q96AJ1 413 aa9.86□□□□□ -0.83
CPSF7-216ENST00000536548 NUDT16Q96DE0 195 aaKnown RBP9.86□□□□□ -0.83
CPSF7-216ENST00000536548 AXIN2Q9Y2T1 843 aa9.86□□□□□ -0.83
CPSF7-216ENST00000536548 RGPD5Q99666 1765 aa9.86□□□□□ -0.83
CPSF7-216ENST00000536548 ACEP12821 1306 aa9.85□□□□□ -0.83
CPSF7-216ENST00000536548 CENPJQ9HC77 1338 aaPredicted RBP9.85□□□□□ -0.83
CPSF7-216ENST00000536548 EXOC5O00471 708 aa9.85□□□□□ -0.83
CPSF7-216ENST00000536548 CANXP27824 592 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms