RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 PTPRMP28827 1452 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 U2SURPO15042 1029 aaKnown RBP8.47□□□□□ -1.05
CPSF7-215ENST00000536145 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
CPSF7-215ENST00000536145 SDSP20132 328 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 KIAA2012Q0VF49 1180 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 NFE2L2Q16236 605 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 TMEM132EQ6IEE7 984 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 TMEM87AQ8NBN3 555 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 OSBPL3Q9H4L5 887 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 IFT57Q9NWB7 429 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 RIMBP3CA6NJZ7 1639 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 RIMBP3BA6NNM3 1639 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 RIMBP3Q9UFD9 1639 aa8.47□□□□□ -1.05
CPSF7-215ENST00000536145 ARHGEF40Q8TER5 1519 aa8.46□□□□□ -1.05
CPSF7-215ENST00000536145 ST18O60284 1047 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 PLEKHG5O94827 1062 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 FKBP5Q13451 457 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-215ENST00000536145 C16orf71Q8IYS4 520 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-215ENST00000536145 OTUD7AQ8TE49 926 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-215ENST00000536145 ANKRD7Q92527 254 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 JARID2Q92833 1246 aaPredicted RBP8.46□□□□□ -1.06
CPSF7-215ENST00000536145 INTS4Q96HW7 963 aaKnown RBP8.46□□□□□ -1.06
CPSF7-215ENST00000536145 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 CABP2Q9NPB3 220 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 SALL3Q9BXA9 1300 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 ATAD2Q6PL18 1390 aa8.46□□□□□ -1.06
CPSF7-215ENST00000536145 MCM2P49736 904 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 GNAI1P63096 354 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 NOLC1Q14978 699 aaKnown RBP eCLIP8.45□□□□□ -1.06
CPSF7-215ENST00000536145 ATP2B3Q16720 1220 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 RPAP2Q8IXW5 612 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-215ENST00000536145 TMX3Q96JJ7 454 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 FUCA2Q9BTY2 467 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 PRDM10Q9NQV6 1147 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 SIGLEC1Q9BZZ2 1709 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 KIAA0232Q92628 1395 aa8.45□□□□□ -1.06
CPSF7-215ENST00000536145 RPAP1Q9BWH6 1393 aaPredicted RBP8.45□□□□□ -1.06
CPSF7-215ENST00000536145 ERC2O15083 957 aa8.44□□□□□ -1.06
CPSF7-215ENST00000536145 KIF20AO95235 890 aa8.44□□□□□ -1.06
CPSF7-215ENST00000536145 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
CPSF7-215ENST00000536145 CEP85Q6P2H3 762 aa8.44□□□□□ -1.06
CPSF7-215ENST00000536145 FAM184AQ8NB25 1140 aa8.44□□□□□ -1.06
CPSF7-215ENST00000536145 MBIPQ9NS73 344 aa8.44□□□□□ -1.06
CPSF7-215ENST00000536145 CTIFO43310 598 aaKnown RBP8.43□□□□□ -1.06
CPSF7-215ENST00000536145 REC8O95072 547 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 LETM1O95202 739 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-215ENST00000536145 C8orf58Q8NAV2 365 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 RNF214Q8ND24 703 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 TSC1Q92574 1164 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 SYAP1Q96A49 352 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-215ENST00000536145 PHACTR3Q96KR7 559 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 BCL2L12Q9HB09 334 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 ZHX1Q9UKY1 873 aaPredicted RBP8.43□□□□□ -1.06
CPSF7-215ENST00000536145 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
CPSF7-215ENST00000536145 GADD45BO75293 160 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-215ENST00000536145 IL13P35225 146 aa8.42□□□□□ -1.06
CPSF7-215ENST00000536145 ANAPC15P60006 121 aa8.42□□□□□ -1.06
CPSF7-215ENST00000536145 FAM69CQ0P6D2 419 aa8.42□□□□□ -1.06
CPSF7-215ENST00000536145 TWISTNBQ3B726 338 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-215ENST00000536145 KIAA1524Q8TCG1 905 aa8.42□□□□□ -1.06
CPSF7-215ENST00000536145 THUMPD2Q9BTF0 503 aaKnown RBP8.42□□□□□ -1.06
CPSF7-215ENST00000536145 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
CPSF7-215ENST00000536145 YTHDC2Q9H6S0 1430 aaKnown RBP8.42□□□□□ -1.06
CPSF7-215ENST00000536145 CDK12Q9NYV4 1490 aaPredicted RBP8.42□□□□□ -1.06
CPSF7-215ENST00000536145 AP5Z1O43299 807 aa8.41□□□□□ -1.06
CPSF7-215ENST00000536145 EPB41L2O43491 1005 aaKnown RBP8.41□□□□□ -1.06
CPSF7-215ENST00000536145 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
CPSF7-215ENST00000536145 SYCP1Q15431 976 aa8.41□□□□□ -1.06
CPSF7-215ENST00000536145 ESYT1Q9BSJ8 1104 aa8.41□□□□□ -1.06
CPSF7-215ENST00000536145 TERF2IPQ9NYB0 399 aa8.41□□□□□ -1.06
CPSF7-215ENST00000536145 DLG5Q8TDM6 1919 aa8.41□□□□□ -1.06
CPSF7-215ENST00000536145 ATP7BP35670 1465 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 MLH3Q9UHC1 1453 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 RIMS2Q9UQ26 1411 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 AATKQ6ZMQ8 1374 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 KDM4AO75164 1064 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 PHF14O94880 888 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 ADCY5O95622 1261 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 PTMAP06454 111 aaKnown RBP8.4□□□□□ -1.06
CPSF7-215ENST00000536145 TRHP20396 242 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-215ENST00000536145 PPP4R3BQ5MIZ7 849 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 CCDC183Q5T5S1 534 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 CASC1Q6TDU7 716 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 USP48Q86UV5 1035 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-215ENST00000536145 KCNF1Q9H3M0 494 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 TTC12Q9H892 705 aaPredicted RBP8.4□□□□□ -1.06
CPSF7-215ENST00000536145 PALD1Q9ULE6 856 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 KIF3AQ9Y496 699 aa8.4□□□□□ -1.06
CPSF7-215ENST00000536145 NRKQ7Z2Y5 1582 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 VGFO15240 615 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-215ENST00000536145 TPM3P06753 285 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 MX1P20591 662 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 NEK4P51957 841 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 PDE1AP54750 535 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 CBX1P83916 185 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 C17orf53Q8N3J3 647 aaPredicted RBP8.39□□□□□ -1.07
CPSF7-215ENST00000536145 USP25Q9UHP3 1055 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 PYCARDQ9ULZ3 195 aa8.39□□□□□ -1.07
CPSF7-215ENST00000536145 DLC1Q96QB1 1528 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms