RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ZCRB1Q8TBF4 217 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-207ENST00000535958 PRIM1P49642 420 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-207ENST00000535958 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
TNFRSF1A-207ENST00000535958 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
TNFRSF1A-207ENST00000535958 TESK2Q96S53 571 aa18.16■□□□□ 0.5
TNFRSF1A-207ENST00000535958 UTRNP46939 3433 aa18.16■□□□□ 0.5
TNFRSF1A-207ENST00000535958 MSH5O43196 834 aa18.15■□□□□ 0.5
TNFRSF1A-207ENST00000535958 TMF1P82094 1093 aa18.15■□□□□ 0.5
TNFRSF1A-207ENST00000535958 RAPGEF4Q8WZA2 1011 aa18.15■□□□□ 0.5
TNFRSF1A-207ENST00000535958 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
TNFRSF1A-207ENST00000535958 PNPLA7Q6ZV29 1317 aa18.15■□□□□ 0.5
TNFRSF1A-207ENST00000535958 USP47Q96K76 1375 aa18.15■□□□□ 0.5
TNFRSF1A-207ENST00000535958 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.5
TNFRSF1A-207ENST00000535958 MEGF6O75095 1541 aa18.14■□□□□ 0.49
TNFRSF1A-207ENST00000535958 CGNL1Q0VF96 1302 aa18.14■□□□□ 0.49
TNFRSF1A-207ENST00000535958 LY75O60449 1722 aa18.13■□□□□ 0.49
TNFRSF1A-207ENST00000535958 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-207ENST00000535958 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 TATP17735 454 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 FBLN1P23142 703 aa18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 HMGB2P26583 209 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 KCNQ4P56696 695 aa18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
TNFRSF1A-207ENST00000535958 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
TNFRSF1A-207ENST00000535958 USHBP1Q8N6Y0 703 aa18.11■□□□□ 0.49
TNFRSF1A-207ENST00000535958 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
TNFRSF1A-207ENST00000535958 NSD2O96028 1365 aa18.1■□□□□ 0.49
TNFRSF1A-207ENST00000535958 PCDH11XQ9BZA7 1347 aa18.1■□□□□ 0.49
TNFRSF1A-207ENST00000535958 PCDH11YQ9BZA8 1340 aa18.1■□□□□ 0.49
TNFRSF1A-207ENST00000535958 FLT4P35916 1363 aa18.08■□□□□ 0.49
TNFRSF1A-207ENST00000535958 SENP3-EIF4A1A0A087X0R7 540 aa18.08■□□□□ 0.48
TNFRSF1A-207ENST00000535958 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
TNFRSF1A-207ENST00000535958 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
TNFRSF1A-207ENST00000535958 FYB1O15117 783 aa18.07■□□□□ 0.48
TNFRSF1A-207ENST00000535958 COL24A1Q17RW2 1714 aa18.06■□□□□ 0.48
TNFRSF1A-207ENST00000535958 INSRP06213 1382 aa18.06■□□□□ 0.48
TNFRSF1A-207ENST00000535958 C5P01031 1676 aa18.06■□□□□ 0.48
TNFRSF1A-207ENST00000535958 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
TNFRSF1A-207ENST00000535958 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
TNFRSF1A-207ENST00000535958 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-207ENST00000535958 C1QTNF8P60827 252 aa18.04■□□□□ 0.48
TNFRSF1A-207ENST00000535958 HSP90AB2PQ58FF8 381 aa18.04■□□□□ 0.48
TNFRSF1A-207ENST00000535958 FLAD1Q8NFF5 587 aa18.04■□□□□ 0.48
TNFRSF1A-207ENST00000535958 NLGN2Q8NFZ4 835 aa18.04■□□□□ 0.48
TNFRSF1A-207ENST00000535958 GRIN3BO60391 1043 aa18.03■□□□□ 0.48
TNFRSF1A-207ENST00000535958 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
TNFRSF1A-207ENST00000535958 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
TNFRSF1A-207ENST00000535958 COL23A1Q86Y22 540 aaPredicted RBP18.02■□□□□ 0.48
TNFRSF1A-207ENST00000535958 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
TNFRSF1A-207ENST00000535958 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1A-207ENST00000535958 SMARCC1Q92922 1105 aaPredicted RBP18.01■□□□□ 0.47
TNFRSF1A-207ENST00000535958 AK7Q96M32 723 aa18.01■□□□□ 0.47
TNFRSF1A-207ENST00000535958 SPG7Q9UQ90 795 aa17.98■□□□□ 0.47
TNFRSF1A-207ENST00000535958 EMILIN1Q9Y6C2 1016 aa17.98■□□□□ 0.47
TNFRSF1A-207ENST00000535958 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
TNFRSF1A-207ENST00000535958 PKD1L3Q7Z443 1732 aa17.98■□□□□ 0.47
TNFRSF1A-207ENST00000535958 C4BP0C0L5 1744 aa17.97■□□□□ 0.47
TNFRSF1A-207ENST00000535958 GOLGB1Q14789 3259 aaKnown RBP17.96■□□□□ 0.47
TNFRSF1A-207ENST00000535958 ITGB4P16144 1822 aa17.96■□□□□ 0.47
TNFRSF1A-207ENST00000535958 TOGARAM1Q9Y4F4 1720 aa17.96■□□□□ 0.47
TNFRSF1A-207ENST00000535958 CYP27B1O15528 508 aa17.96■□□□□ 0.47
TNFRSF1A-207ENST00000535958 PHF14O94880 888 aa17.96■□□□□ 0.47
TNFRSF1A-207ENST00000535958 CD2APQ9Y5K6 639 aa17.96■□□□□ 0.47
TNFRSF1A-207ENST00000535958 YBX3P16989 372 aaKnown RBP eCLIP17.95■□□□□ 0.46
TNFRSF1A-207ENST00000535958 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
TNFRSF1A-207ENST00000535958 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
TNFRSF1A-207ENST00000535958 TRIM26Q12899 539 aaPredicted RBP17.93■□□□□ 0.46
TNFRSF1A-207ENST00000535958 ANKRD26Q9UPS8 1709 aa17.92■□□□□ 0.46
TNFRSF1A-207ENST00000535958 SSFA2P28290 1259 aa17.91■□□□□ 0.46
TNFRSF1A-207ENST00000535958 PIGBQ92521 554 aa17.91■□□□□ 0.46
TNFRSF1A-207ENST00000535958 CARD14Q9BXL6 1004 aa17.91■□□□□ 0.46
TNFRSF1A-207ENST00000535958 WASHC2AQ641Q2 1341 aa17.91■□□□□ 0.46
TNFRSF1A-207ENST00000535958 ATP10DQ9P241 1426 aa17.9■□□□□ 0.46
TNFRSF1A-207ENST00000535958 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.9■□□□□ 0.46
TNFRSF1A-207ENST00000535958 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
TNFRSF1A-207ENST00000535958 NCAPD2Q15021 1401 aa17.89■□□□□ 0.46
TNFRSF1A-207ENST00000535958 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 LOC102724428A0A0B4J2F2 783 aa17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 SIK1P57059 783 aa17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 NKX1-1Q15270 411 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 IFNL2Q8IZJ0 200 aa17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.89■□□□□ 0.45
TNFRSF1A-207ENST00000535958 GNPATO15228 680 aa17.88■□□□□ 0.45
TNFRSF1A-207ENST00000535958 ATP6V1AP38606 617 aa17.88■□□□□ 0.45
TNFRSF1A-207ENST00000535958 EYA1Q99502 592 aa17.88■□□□□ 0.45
TNFRSF1A-207ENST00000535958 IGSF1Q8N6C5 1336 aa17.88■□□□□ 0.45
TNFRSF1A-207ENST00000535958 TIMELESSQ9UNS1 1208 aa17.87■□□□□ 0.45
TNFRSF1A-207ENST00000535958 PHKG2P15735 406 aa17.86■□□□□ 0.45
TNFRSF1A-207ENST00000535958 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
TNFRSF1A-207ENST00000535958 LINC00116Q8NCU8 138 aa17.86■□□□□ 0.45
TNFRSF1A-207ENST00000535958 WWC3Q9ULE0 1092 aa17.86■□□□□ 0.45
TNFRSF1A-207ENST00000535958 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
TNFRSF1A-207ENST00000535958 ZNF526Q8TF50 670 aaPredicted RBP17.84■□□□□ 0.45
TNFRSF1A-207ENST00000535958 POLKQ9UBT6 870 aa17.84■□□□□ 0.45
TNFRSF1A-207ENST00000535958 ASAP1Q9ULH1 1129 aa17.84■□□□□ 0.45
TNFRSF1A-207ENST00000535958 HSP90AB1P08238 724 aaKnown RBP17.83■□□□□ 0.44
TNFRSF1A-207ENST00000535958 EIF4A2Q14240 407 aaKnown RBP17.83■□□□□ 0.44
TNFRSF1A-207ENST00000535958 SMIM5Q71RC9 77 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms