RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 KTN1Q86UP2 1357 aaKnown RBP12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 SBNO2Q9Y2G9 1366 aa12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 FBLN1P23142 703 aa12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 CD2APQ9Y5K6 639 aa12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 EVC2Q86UK5 1308 aa12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
LRTOMT-211ENST00000535883 COL13A1Q5TAT6 717 aaPredicted RBP12.8□□□□□ -0.36
LRTOMT-211ENST00000535883 CCNL1Q9UK58 526 aaPredicted RBP12.8□□□□□ -0.36
LRTOMT-211ENST00000535883 MSH5O43196 834 aa12.79□□□□□ -0.36
LRTOMT-211ENST00000535883 HTRA3P83110 453 aa12.79□□□□□ -0.36
LRTOMT-211ENST00000535883 LTV1Q96GA3 475 aaPredicted RBP12.78□□□□□ -0.36
LRTOMT-211ENST00000535883 LTN1O94822 1766 aa12.78□□□□□ -0.36
LRTOMT-211ENST00000535883 USP54Q70EL1 1684 aa12.77□□□□□ -0.36
LRTOMT-211ENST00000535883 DOT1LQ8TEK3 1739 aa12.77□□□□□ -0.36
LRTOMT-211ENST00000535883 IP6K1Q92551 441 aa12.77□□□□□ -0.37
LRTOMT-211ENST00000535883 MEGF6O75095 1541 aa12.77□□□□□ -0.37
LRTOMT-211ENST00000535883 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
LRTOMT-211ENST00000535883 L3MBTL2Q969R5 705 aa12.76□□□□□ -0.37
LRTOMT-211ENST00000535883 IGSF1Q8N6C5 1336 aa12.76□□□□□ -0.37
LRTOMT-211ENST00000535883 FAM208AQ9UK61 1670 aaKnown RBP12.76□□□□□ -0.37
LRTOMT-211ENST00000535883 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
LRTOMT-211ENST00000535883 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
LRTOMT-211ENST00000535883 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
LRTOMT-211ENST00000535883 TOGARAM1Q9Y4F4 1720 aa12.74□□□□□ -0.37
LRTOMT-211ENST00000535883 APLP1P51693 650 aa12.74□□□□□ -0.37
LRTOMT-211ENST00000535883 NMRK2Q9NPI5 230 aa12.73□□□□□ -0.37
LRTOMT-211ENST00000535883 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
LRTOMT-211ENST00000535883 CAPN15O75808 1086 aa12.72□□□□□ -0.37
LRTOMT-211ENST00000535883 NBPF6Q5VWK0 638 aa12.72□□□□□ -0.37
LRTOMT-211ENST00000535883 NBPF4Q96M43 638 aa12.72□□□□□ -0.37
LRTOMT-211ENST00000535883 USP47Q96K76 1375 aa12.71□□□□□ -0.37
LRTOMT-211ENST00000535883 HOXC9P31274 260 aa12.71□□□□□ -0.37
LRTOMT-211ENST00000535883 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.37
LRTOMT-211ENST00000535883 C5P01031 1676 aa12.7□□□□□ -0.38
LRTOMT-211ENST00000535883 TAF1LQ8IZX4 1826 aa12.7□□□□□ -0.38
LRTOMT-211ENST00000535883 TOMM70O94826 608 aa12.7□□□□□ -0.38
LRTOMT-211ENST00000535883 JMYQ8N9B5 988 aa12.7□□□□□ -0.38
LRTOMT-211ENST00000535883 SIN3AQ96ST3 1273 aa12.69□□□□□ -0.38
LRTOMT-211ENST00000535883 CICQ96RK0 1608 aaPredicted RBP12.69□□□□□ -0.38
LRTOMT-211ENST00000535883 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
LRTOMT-211ENST00000535883 PALLDQ8WX93 1383 aa12.69□□□□□ -0.38
LRTOMT-211ENST00000535883 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
LRTOMT-211ENST00000535883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.68□□□□□ -0.38
LRTOMT-211ENST00000535883 CYP27B1O15528 508 aa12.68□□□□□ -0.38
LRTOMT-211ENST00000535883 PHF14O94880 888 aa12.68□□□□□ -0.38
LRTOMT-211ENST00000535883 TMC1Q8TDI8 760 aa12.68□□□□□ -0.38
LRTOMT-211ENST00000535883 KLRG1Q96E93 195 aa12.68□□□□□ -0.38
LRTOMT-211ENST00000535883 MPRIPQ6WCQ1 1025 aa12.67□□□□□ -0.38
LRTOMT-211ENST00000535883 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
LRTOMT-211ENST00000535883 EDC4Q6P2E9 1401 aaKnown RBP12.67□□□□□ -0.38
LRTOMT-211ENST00000535883 C4BP0C0L5 1744 aa12.67□□□□□ -0.38
LRTOMT-211ENST00000535883 UBR3Q6ZT12 1888 aa12.67□□□□□ -0.38
LRTOMT-211ENST00000535883 PXDNLA1KZ92 1463 aa12.66□□□□□ -0.38
LRTOMT-211ENST00000535883 A0A0G2JLW4 131 aa12.66□□□□□ -0.38
LRTOMT-211ENST00000535883 FLAD1Q8NFF5 587 aa12.66□□□□□ -0.38
LRTOMT-211ENST00000535883 PIGBQ92521 554 aa12.66□□□□□ -0.38
LRTOMT-211ENST00000535883 ROCK2O75116 1388 aaKnown RBP12.66□□□□□ -0.38
LRTOMT-211ENST00000535883 WDR90Q96KV7 1748 aa12.65□□□□□ -0.38
LRTOMT-211ENST00000535883 PRELPP51888 382 aa12.65□□□□□ -0.38
LRTOMT-211ENST00000535883 ITPK1Q13572 414 aa12.65□□□□□ -0.38
LRTOMT-211ENST00000535883 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
LRTOMT-211ENST00000535883 MAP2P11137 1827 aaKnown RBP12.65□□□□□ -0.39
LRTOMT-211ENST00000535883 KCNA3P22001 575 aa12.64□□□□□ -0.39
LRTOMT-211ENST00000535883 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
LRTOMT-211ENST00000535883 MMP10P09238 476 aa12.63□□□□□ -0.39
LRTOMT-211ENST00000535883 AMPHP49418 695 aa12.63□□□□□ -0.39
LRTOMT-211ENST00000535883 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
LRTOMT-211ENST00000535883 TNS4Q8IZW8 715 aa12.63□□□□□ -0.39
LRTOMT-211ENST00000535883 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
LRTOMT-211ENST00000535883 AK7Q96M32 723 aa12.63□□□□□ -0.39
LRTOMT-211ENST00000535883 DPEP1P16444 411 aa12.62□□□□□ -0.39
LRTOMT-211ENST00000535883 ARHGAP27Q6ZUM4 889 aa12.62□□□□□ -0.39
LRTOMT-211ENST00000535883 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
LRTOMT-211ENST00000535883 KIF13BQ9NQT8 1826 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 SSFA2P28290 1259 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 HSP90AB2PQ58FF8 381 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 C9orf131Q5VYM1 1079 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
LRTOMT-211ENST00000535883 ITGB4P16144 1822 aa12.6□□□□□ -0.39
LRTOMT-211ENST00000535883 LOC102724428A0A0B4J2F2 783 aa12.6□□□□□ -0.39
LRTOMT-211ENST00000535883 SIK1P57059 783 aa12.6□□□□□ -0.39
LRTOMT-211ENST00000535883 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 GNPATO15228 680 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 TGFB2P61812 414 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 COG3Q96JB2 828 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 RRAGCQ9HB90 399 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 CGNL1Q0VF96 1302 aa12.59□□□□□ -0.39
LRTOMT-211ENST00000535883 FYB1O15117 783 aa12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 NKX1-1Q15270 411 aaPredicted RBP12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 C10orf71Q711Q0 1435 aa12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 RAPGEF4Q8WZA2 1011 aa12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 PCDH11XQ9BZA7 1347 aa12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 PCDH11YQ9BZA8 1340 aa12.58□□□□□ -0.4
LRTOMT-211ENST00000535883 FCHSD2O94868 740 aa12.57□□□□□ -0.4
LRTOMT-211ENST00000535883 FSTL1Q12841 308 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms