RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
MSRB3-205ENST00000535239 R3HDM1Q15032 1099 aaKnown RBP20.99■□□□□ 0.95
MSRB3-205ENST00000535239 DDX54Q8TDD1 881 aaKnown RBP20.99■□□□□ 0.95
MSRB3-205ENST00000535239 RAPGEF4Q8WZA2 1011 aa20.99■□□□□ 0.95
MSRB3-205ENST00000535239 SHANK3Q9BYB0 1731 aa20.98■□□□□ 0.95
MSRB3-205ENST00000535239 AMER1Q5JTC6 1135 aaPredicted RBP20.98■□□□□ 0.95
MSRB3-205ENST00000535239 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
MSRB3-205ENST00000535239 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
MSRB3-205ENST00000535239 TATP17735 454 aaPredicted RBP20.97■□□□□ 0.95
MSRB3-205ENST00000535239 ACSBG1Q96GR2 724 aa20.96■□□□□ 0.95
MSRB3-205ENST00000535239 EYA1Q99502 592 aa20.96■□□□□ 0.95
MSRB3-205ENST00000535239 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
MSRB3-205ENST00000535239 LRP5O75197 1615 aa20.95■□□□□ 0.94
MSRB3-205ENST00000535239 PLEKHG2Q9H7P9 1386 aa20.95■□□□□ 0.94
MSRB3-205ENST00000535239 TNNT2P45379 298 aaPredicted RBP20.94■□□□□ 0.94
MSRB3-205ENST00000535239 TXNRD1Q16881 649 aa20.94■□□□□ 0.94
MSRB3-205ENST00000535239 BTAF1O14981 1849 aa20.93■□□□□ 0.94
MSRB3-205ENST00000535239 EIF4A2Q14240 407 aaKnown RBP20.93■□□□□ 0.94
MSRB3-205ENST00000535239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.93■□□□□ 0.94
MSRB3-205ENST00000535239 NPC1L1Q9UHC9 1359 aa20.92■□□□□ 0.94
MSRB3-205ENST00000535239 PKD1L3Q7Z443 1732 aa20.91■□□□□ 0.94
MSRB3-205ENST00000535239 PCDH11XQ9BZA7 1347 aa20.91■□□□□ 0.94
MSRB3-205ENST00000535239 PCDH11YQ9BZA8 1340 aa20.91■□□□□ 0.94
MSRB3-205ENST00000535239 PRIM1P49642 420 aaKnown RBP20.9■□□□□ 0.94
MSRB3-205ENST00000535239 KAT6BQ8WYB5 2073 aa20.9■□□□□ 0.94
MSRB3-205ENST00000535239 IGSF1Q8N6C5 1336 aa20.89■□□□□ 0.93
MSRB3-205ENST00000535239 CYP27B1O15528 508 aa20.89■□□□□ 0.93
MSRB3-205ENST00000535239 ANO8Q9HCE9 1232 aaPredicted RBP20.89■□□□□ 0.93
MSRB3-205ENST00000535239 DOT1LQ8TEK3 1739 aa20.88■□□□□ 0.93
MSRB3-205ENST00000535239 NKX1-1Q15270 411 aaPredicted RBP20.88■□□□□ 0.93
MSRB3-205ENST00000535239 SPG7Q9UQ90 795 aa20.87■□□□□ 0.93
MSRB3-205ENST00000535239 SLC27A3Q5K4L6 730 aa20.86■□□□□ 0.93
MSRB3-205ENST00000535239 SLC15A2Q16348 729 aa20.84■□□□□ 0.93
MSRB3-205ENST00000535239 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
MSRB3-205ENST00000535239 PAPPAQ13219 1627 aa20.84■□□□□ 0.93
MSRB3-205ENST00000535239 SYTL4Q96C24 671 aaPredicted RBP20.83■□□□□ 0.93
MSRB3-205ENST00000535239 STK32BQ9NY57 414 aa20.83■□□□□ 0.93
MSRB3-205ENST00000535239 LY75O60449 1722 aa20.82■□□□□ 0.92
MSRB3-205ENST00000535239 IL13P35225 146 aa20.82■□□□□ 0.92
MSRB3-205ENST00000535239 MTHFSP49914 203 aa20.81■□□□□ 0.92
MSRB3-205ENST00000535239 CASZ1Q86V15 1759 aa20.81■□□□□ 0.92
MSRB3-205ENST00000535239 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
MSRB3-205ENST00000535239 KDRP35968 1356 aa20.8■□□□□ 0.92
MSRB3-205ENST00000535239 PHKG2P15735 406 aa20.79■□□□□ 0.92
MSRB3-205ENST00000535239 CC2D1BQ5T0F9 858 aaKnown RBP20.79■□□□□ 0.92
MSRB3-205ENST00000535239 SPON1Q9HCB6 807 aa20.79■□□□□ 0.92
MSRB3-205ENST00000535239 TOGARAM1Q9Y4F4 1720 aa20.78■□□□□ 0.92
MSRB3-205ENST00000535239 AKT1S1Q96B36 256 aa20.78■□□□□ 0.92
MSRB3-205ENST00000535239 HMGB2P26583 209 aaKnown RBP20.77■□□□□ 0.92
MSRB3-205ENST00000535239 AMOTQ4VCS5 1084 aa20.77■□□□□ 0.92
MSRB3-205ENST00000535239 ITGB4P16144 1822 aa20.76■□□□□ 0.91
MSRB3-205ENST00000535239 PLEKHO1Q53GL0 409 aaPredicted RBP20.76■□□□□ 0.91
MSRB3-205ENST00000535239 MPRIPQ6WCQ1 1025 aa20.75■□□□□ 0.91
MSRB3-205ENST00000535239 PDGFDQ9GZP0 370 aaPredicted RBP20.75■□□□□ 0.91
MSRB3-205ENST00000535239 ZNF827Q17R98 1081 aa20.74■□□□□ 0.91
MSRB3-205ENST00000535239 QSER1Q2KHR3 1735 aa20.74■□□□□ 0.91
MSRB3-205ENST00000535239 SULT6B1Q6IMI4 303 aa20.74■□□□□ 0.91
MSRB3-205ENST00000535239 AEBP1Q8IUX7 1158 aa20.74■□□□□ 0.91
MSRB3-205ENST00000535239 PIGBQ92521 554 aa20.74■□□□□ 0.91
MSRB3-205ENST00000535239 SMARCC1Q92922 1105 aaPredicted RBP20.74■□□□□ 0.91
MSRB3-205ENST00000535239 HSP90AB1P08238 724 aaKnown RBP20.73■□□□□ 0.91
MSRB3-205ENST00000535239 CCNL1Q9UK58 526 aaPredicted RBP20.73■□□□□ 0.91
MSRB3-205ENST00000535239 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
MSRB3-205ENST00000535239 ERVV-2B6SEH9 535 aa20.71■□□□□ 0.91
MSRB3-205ENST00000535239 DIAPH1O60610 1272 aaKnown RBP20.71■□□□□ 0.91
MSRB3-205ENST00000535239 DCAF5Q96JK2 942 aa20.71■□□□□ 0.91
MSRB3-205ENST00000535239 KCNQ4P56696 695 aa20.7■□□□□ 0.9
MSRB3-205ENST00000535239 SLC16A10Q8TF71 515 aa20.7■□□□□ 0.9
MSRB3-205ENST00000535239 MTFR1LQ9H019 292 aa20.7■□□□□ 0.9
MSRB3-205ENST00000535239 TMOD3Q9NYL9 352 aa20.7■□□□□ 0.9
MSRB3-205ENST00000535239 COL3A1P02461 1466 aaPredicted RBP20.69■□□□□ 0.9
MSRB3-205ENST00000535239 PTGER2P43116 358 aa20.69■□□□□ 0.9
MSRB3-205ENST00000535239 ZNF530Q6P9A1 599 aaPredicted RBP20.69■□□□□ 0.9
MSRB3-205ENST00000535239 ZBTB7AO95365 584 aa20.68■□□□□ 0.9
MSRB3-205ENST00000535239 SGIP1Q9BQI5 828 aa20.68■□□□□ 0.9
MSRB3-205ENST00000535239 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
MSRB3-205ENST00000535239 TFCP2L1Q9NZI6 479 aa20.66■□□□□ 0.9
MSRB3-205ENST00000535239 KDM6AO15550 1401 aaPredicted RBP20.66■□□□□ 0.9
MSRB3-205ENST00000535239 TAF1LQ8IZX4 1826 aa20.66■□□□□ 0.9
MSRB3-205ENST00000535239 C5P01031 1676 aa20.65■□□□□ 0.9
MSRB3-205ENST00000535239 C1orf141Q5JVX7 400 aa20.65■□□□□ 0.9
MSRB3-205ENST00000535239 ATG3Q9NT62 314 aa20.65■□□□□ 0.9
MSRB3-205ENST00000535239 ASAP1Q9ULH1 1129 aa20.65■□□□□ 0.9
MSRB3-205ENST00000535239 LOC102724428A0A0B4J2F2 783 aa20.64■□□□□ 0.89
MSRB3-205ENST00000535239 SIK1P57059 783 aa20.64■□□□□ 0.89
MSRB3-205ENST00000535239 AKAP4Q5JQC9 854 aa20.64■□□□□ 0.89
MSRB3-205ENST00000535239 PPP1R1BQ9UD71 204 aaPredicted RBP20.64■□□□□ 0.89
MSRB3-205ENST00000535239 ATF5Q9Y2D1 282 aaPredicted RBP20.64■□□□□ 0.89
MSRB3-205ENST00000535239 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
MSRB3-205ENST00000535239 COL24A1Q17RW2 1714 aa20.64■□□□□ 0.89
MSRB3-205ENST00000535239 HMOX1P09601 288 aa20.63■□□□□ 0.89
MSRB3-205ENST00000535239 ZNF831Q5JPB2 1677 aa20.62■□□□□ 0.89
MSRB3-205ENST00000535239 PPP2R1AP30153 589 aa20.62■□□□□ 0.89
MSRB3-205ENST00000535239 CNGB1Q14028 1251 aaPredicted RBP20.61■□□□□ 0.89
MSRB3-205ENST00000535239 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
MSRB3-205ENST00000535239 CFAP53Q96M91 514 aa20.61■□□□□ 0.89
MSRB3-205ENST00000535239 CABP4P57796 275 aa20.6■□□□□ 0.89
MSRB3-205ENST00000535239 C4BP0C0L5 1744 aa20.6■□□□□ 0.89
MSRB3-205ENST00000535239 SCN11AQ9UI33 1791 aa20.59■□□□□ 0.89
MSRB3-205ENST00000535239 COL23A1Q86Y22 540 aaPredicted RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms