RNA–Protein interactions for RNA: ENST00000535143.1

MSRB3-204, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 419 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-204ENST00000535143 NLGN2Q8NFZ4 835 aa24.23■■□□□ 1.47
MSRB3-204ENST00000535143 TERF2IPQ9NYB0 399 aa24.23■■□□□ 1.47
MSRB3-204ENST00000535143 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
MSRB3-204ENST00000535143 NSD2O96028 1365 aa24.22■■□□□ 1.47
MSRB3-204ENST00000535143 PRIM1P49642 420 aaKnown RBP24.22■■□□□ 1.47
MSRB3-204ENST00000535143 MEGF6O75095 1541 aa24.21■■□□□ 1.47
MSRB3-204ENST00000535143 ANKRD36BQ8N2N9 1353 aa24.2■■□□□ 1.46
MSRB3-204ENST00000535143 MAP3K19Q56UN5 1328 aa24.2■■□□□ 1.46
MSRB3-204ENST00000535143 SLC16A10Q8TF71 515 aa24.2■■□□□ 1.46
MSRB3-204ENST00000535143 HOXC9P31274 260 aa24.18■■□□□ 1.46
MSRB3-204ENST00000535143 AMPHP49418 695 aa24.16■■□□□ 1.46
MSRB3-204ENST00000535143 COG3Q96JB2 828 aa24.16■■□□□ 1.46
MSRB3-204ENST00000535143 CCNL1Q9UK58 526 aaPredicted RBP24.16■■□□□ 1.46
MSRB3-204ENST00000535143 GIGYF1O75420 1035 aaPredicted RBP24.15■■□□□ 1.46
MSRB3-204ENST00000535143 MSH5O43196 834 aa24.14■■□□□ 1.45
MSRB3-204ENST00000535143 USHBP1Q8N6Y0 703 aa24.14■■□□□ 1.45
MSRB3-204ENST00000535143 ZCRB1Q8TBF4 217 aaKnown RBP24.14■■□□□ 1.45
MSRB3-204ENST00000535143 YBX3P16989 372 aaKnown RBP eCLIP24.13■■□□□ 1.45
MSRB3-204ENST00000535143 MSL1Q68DK7 614 aa24.13■■□□□ 1.45
MSRB3-204ENST00000535143 RRS1Q15050 365 aaKnown RBP24.12■■□□□ 1.45
MSRB3-204ENST00000535143 COL23A1Q86Y22 540 aaPredicted RBP24.11■■□□□ 1.45
MSRB3-204ENST00000535143 TONSLQ96HA7 1378 aa24.11■■□□□ 1.45
MSRB3-204ENST00000535143 C5P01031 1676 aa24.11■■□□□ 1.45
MSRB3-204ENST00000535143 TESK2Q96S53 571 aa24.1■■□□□ 1.45
MSRB3-204ENST00000535143 USP47Q96K76 1375 aa24.1■■□□□ 1.45
MSRB3-204ENST00000535143 NBPF6Q5VWK0 638 aa24.09■■□□□ 1.45
MSRB3-204ENST00000535143 NBPF4Q96M43 638 aa24.09■■□□□ 1.45
MSRB3-204ENST00000535143 ST20-MTHFSA0A0A6YYL1 179 aa24.08■■□□□ 1.45
MSRB3-204ENST00000535143 PUS7Q96PZ0 661 aaKnown RBP24.08■■□□□ 1.45
MSRB3-204ENST00000535143 RTL1A6NKG5 1358 aa24.06■■□□□ 1.44
MSRB3-204ENST00000535143 TAF1LQ8IZX4 1826 aa24.06■■□□□ 1.44
MSRB3-204ENST00000535143 GGNBP2Q9H3C7 697 aa24.06■■□□□ 1.44
MSRB3-204ENST00000535143 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
MSRB3-204ENST00000535143 SMG6Q86US8 1419 aaKnown RBP24.02■■□□□ 1.44
MSRB3-204ENST00000535143 RAPGEF4Q8WZA2 1011 aa24.02■■□□□ 1.44
MSRB3-204ENST00000535143 KIF20BQ96Q89 1820 aa24.02■■□□□ 1.44
MSRB3-204ENST00000535143 ATP10DQ9P241 1426 aa24.01■■□□□ 1.43
MSRB3-204ENST00000535143 GRIN3BO60391 1043 aa24.01■■□□□ 1.43
MSRB3-204ENST00000535143 PALLDQ8WX93 1383 aa24.01■■□□□ 1.43
MSRB3-204ENST00000535143 ITGB4P16144 1822 aa24■■□□□ 1.43
MSRB3-204ENST00000535143 TATP17735 454 aaPredicted RBP24■■□□□ 1.43
MSRB3-204ENST00000535143 CEP350Q5VT06 3117 aa23.99■■□□□ 1.43
MSRB3-204ENST00000535143 FYB1O15117 783 aa23.99■■□□□ 1.43
MSRB3-204ENST00000535143 HSP90AB2PQ58FF8 381 aa23.99■■□□□ 1.43
MSRB3-204ENST00000535143 MPRIPQ6WCQ1 1025 aa23.99■■□□□ 1.43
MSRB3-204ENST00000535143 WWC3Q9ULE0 1092 aa23.99■■□□□ 1.43
MSRB3-204ENST00000535143 C4BP0C0L5 1744 aa23.98■■□□□ 1.43
MSRB3-204ENST00000535143 AMIGO3Q86WK7 504 aa23.98■■□□□ 1.43
MSRB3-204ENST00000535143 CGNL1Q0VF96 1302 aa23.98■■□□□ 1.43
MSRB3-204ENST00000535143 PCDH11XQ9BZA7 1347 aa23.98■■□□□ 1.43
MSRB3-204ENST00000535143 PCDH11YQ9BZA8 1340 aa23.98■■□□□ 1.43
MSRB3-204ENST00000535143 SMIM5Q71RC9 77 aa23.97■■□□□ 1.43
MSRB3-204ENST00000535143 UBR3Q6ZT12 1888 aa23.96■■□□□ 1.43
MSRB3-204ENST00000535143 INSRP06213 1382 aa23.94■■□□□ 1.42
MSRB3-204ENST00000535143 CYP27B1O15528 508 aa23.94■■□□□ 1.42
MSRB3-204ENST00000535143 PHF14O94880 888 aa23.94■■□□□ 1.42
MSRB3-204ENST00000535143 ZNF526Q8TF50 670 aaPredicted RBP23.94■■□□□ 1.42
MSRB3-204ENST00000535143 PKD1L3Q7Z443 1732 aa23.93■■□□□ 1.42
MSRB3-204ENST00000535143 FLT4P35916 1363 aa23.93■■□□□ 1.42
MSRB3-204ENST00000535143 CD2APQ9Y5K6 639 aa23.93■■□□□ 1.42
MSRB3-204ENST00000535143 AK7Q96M32 723 aa23.92■■□□□ 1.42
MSRB3-204ENST00000535143 FLAD1Q8NFF5 587 aa23.91■■□□□ 1.42
MSRB3-204ENST00000535143 ADCY9O60503 1353 aa23.91■■□□□ 1.42
MSRB3-204ENST00000535143 GPBP1L1Q9HC44 474 aaPredicted RBP23.9■■□□□ 1.42
MSRB3-204ENST00000535143 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
MSRB3-204ENST00000535143 MAP2P11137 1827 aaKnown RBP23.89■■□□□ 1.42
MSRB3-204ENST00000535143 IGSF1Q8N6C5 1336 aa23.89■■□□□ 1.42
MSRB3-204ENST00000535143 TMF1P82094 1093 aa23.89■■□□□ 1.41
MSRB3-204ENST00000535143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.87■■□□□ 1.41
MSRB3-204ENST00000535143 IFFO2Q5TF58 517 aa23.87■■□□□ 1.41
MSRB3-204ENST00000535143 PIGBQ92521 554 aa23.87■■□□□ 1.41
MSRB3-204ENST00000535143 LINC00116Q8NCU8 138 aa23.86■■□□□ 1.41
MSRB3-204ENST00000535143 SMARCC1Q92922 1105 aaPredicted RBP23.86■■□□□ 1.41
MSRB3-204ENST00000535143 SLC24A1O60721 1099 aa23.85■■□□□ 1.41
MSRB3-204ENST00000535143 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
MSRB3-204ENST00000535143 KIF24Q5T7B8 1368 aa23.84■■□□□ 1.41
MSRB3-204ENST00000535143 PPM1GO15355 546 aaPredicted RBP23.84■■□□□ 1.41
MSRB3-204ENST00000535143 ANKRD26Q9UPS8 1709 aa23.82■■□□□ 1.4
MSRB3-204ENST00000535143 LOC102724428A0A0B4J2F2 783 aa23.82■■□□□ 1.4
MSRB3-204ENST00000535143 SIK1P57059 783 aa23.82■■□□□ 1.4
MSRB3-204ENST00000535143 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
MSRB3-204ENST00000535143 NCAPD2Q15021 1401 aa23.82■■□□□ 1.4
MSRB3-204ENST00000535143 SSFA2P28290 1259 aa23.8■■□□□ 1.4
MSRB3-204ENST00000535143 ITPK1Q13572 414 aa23.8■■□□□ 1.4
MSRB3-204ENST00000535143 GNPATO15228 680 aa23.79■■□□□ 1.4
MSRB3-204ENST00000535143 HSPA6P17066 643 aa23.79■■□□□ 1.4
MSRB3-204ENST00000535143 HMGB2P26583 209 aaKnown RBP23.79■■□□□ 1.4
MSRB3-204ENST00000535143 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
MSRB3-204ENST00000535143 ASAP1Q9ULH1 1129 aa23.79■■□□□ 1.4
MSRB3-204ENST00000535143 TMOD3Q9NYL9 352 aa23.78■■□□□ 1.4
MSRB3-204ENST00000535143 SPG7Q9UQ90 795 aa23.78■■□□□ 1.4
MSRB3-204ENST00000535143 EYA1Q99502 592 aa23.77■■□□□ 1.4
MSRB3-204ENST00000535143 N4BP2Q86UW6 1770 aaPredicted RBP23.77■■□□□ 1.4
MSRB3-204ENST00000535143 KIAA1551Q9HCM1 1747 aa23.76■■□□□ 1.39
MSRB3-204ENST00000535143 ATP6V1AP38606 617 aa23.76■■□□□ 1.39
MSRB3-204ENST00000535143 CICQ96RK0 1608 aaPredicted RBP23.75■■□□□ 1.39
MSRB3-204ENST00000535143 CDCA8Q53HL2 280 aa23.74■■□□□ 1.39
MSRB3-204ENST00000535143 PXDNLA1KZ92 1463 aa23.74■■□□□ 1.39
MSRB3-204ENST00000535143 KIF13BQ9NQT8 1826 aa23.73■■□□□ 1.39
MSRB3-204ENST00000535143 KIF3CO14782 793 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms