RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 AGERQ15109 404 aa6.76□□□□□ -1.33
SNHG1-201ENST00000535076 GPATCH11Q8N954 259 aa6.76□□□□□ -1.33
SNHG1-201ENST00000535076 PCMTD1Q96MG8 357 aaPredicted RBP6.76□□□□□ -1.33
SNHG1-201ENST00000535076 CARD14Q9BXL6 1004 aa6.76□□□□□ -1.33
SNHG1-201ENST00000535076 YY1AP1Q9H869 796 aa6.76□□□□□ -1.33
SNHG1-201ENST00000535076 FKBPLQ9UIM3 349 aa6.76□□□□□ -1.33
SNHG1-201ENST00000535076 HDAC5Q9UQL6 1122 aa6.76□□□□□ -1.33
SNHG1-201ENST00000535076 MAGEB6P1A0A0J9YX57 407 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 ZBTB7CA1YPR0 619 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 GOLGA6L3A6NEY3 463 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 ERFEQ4G0M1 354 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 NBPF14Q5TI25 921 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 TMED8Q6PL24 325 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-201ENST00000535076 MTERF4Q7Z6M4 381 aaKnown RBP6.75□□□□□ -1.33
SNHG1-201ENST00000535076 ARMC2Q8NEN0 867 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 ZNF830Q96NB3 372 aaPredicted RBP6.75□□□□□ -1.33
SNHG1-201ENST00000535076 ZFAND3Q9H8U3 227 aa6.75□□□□□ -1.33
SNHG1-201ENST00000535076 CAPN5O15484 640 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-201ENST00000535076 GPR37L1O60883 481 aa6.74□□□□□ -1.33
SNHG1-201ENST00000535076 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
SNHG1-201ENST00000535076 FAM43BQ6ZT52 329 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-201ENST00000535076 TRMT44Q8IYL2 757 aaKnown RBP6.74□□□□□ -1.33
SNHG1-201ENST00000535076 GJD4Q96KN9 370 aaPredicted RBP6.74□□□□□ -1.33
SNHG1-201ENST00000535076 TRIM47Q96LD4 638 aa6.74□□□□□ -1.33
SNHG1-201ENST00000535076 PRDM16Q9HAZ2 1276 aa6.74□□□□□ -1.33
SNHG1-201ENST00000535076 TTC36A6NLP5 189 aa6.73□□□□□ -1.33
SNHG1-201ENST00000535076 WDR4P57081 412 aaKnown RBP6.73□□□□□ -1.33
SNHG1-201ENST00000535076 LCE2AQ5TA79 106 aaPredicted RBP6.73□□□□□ -1.33
SNHG1-201ENST00000535076 PDXDC2PQ6P474 469 aa6.73□□□□□ -1.33
SNHG1-201ENST00000535076 NBPF11Q86T75 865 aa6.73□□□□□ -1.33
SNHG1-201ENST00000535076 ITPKCQ96DU7 683 aa6.73□□□□□ -1.33
SNHG1-201ENST00000535076 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
SNHG1-201ENST00000535076 FSHRP23945 695 aa6.72□□□□□ -1.33
SNHG1-201ENST00000535076 TNNT2P45379 298 aaPredicted RBP6.72□□□□□ -1.33
SNHG1-201ENST00000535076 TERF1P54274 439 aa6.72□□□□□ -1.33
SNHG1-201ENST00000535076 NBPF1Q3BBV0 1214 aa6.72□□□□□ -1.33
SNHG1-201ENST00000535076 GPKOWQ92917 476 aaPredicted RBP eCLIP6.72□□□□□ -1.335e-31■■■□□ 17.1
SNHG1-201ENST00000535076 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
SNHG1-201ENST00000535076 ARHGAP9Q9BRR9 750 aa6.71□□□□□ -1.34
SNHG1-201ENST00000535076 GEMIN8Q9NWZ8 242 aaKnown RBP6.71□□□□□ -1.34
SNHG1-201ENST00000535076 MAP4K5Q9Y4K4 846 aa6.71□□□□□ -1.34
SNHG1-201ENST00000535076 TCERG1O14776 1098 aaKnown RBP6.7□□□□□ -1.34
SNHG1-201ENST00000535076 ZIC2O95409 532 aaPredicted RBP6.7□□□□□ -1.34
SNHG1-201ENST00000535076 APPP05067 770 aa6.7□□□□□ -1.34
SNHG1-201ENST00000535076 MTMR14Q8NCE2 650 aa6.7□□□□□ -1.34
SNHG1-201ENST00000535076 ADAM32Q8TC27 787 aa6.7□□□□□ -1.34
SNHG1-201ENST00000535076 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
SNHG1-201ENST00000535076 NR5A1Q13285 461 aa6.69□□□□□ -1.34
SNHG1-201ENST00000535076 RALBP1Q15311 655 aa6.69□□□□□ -1.34
SNHG1-201ENST00000535076 TMEM259Q4ZIN3 620 aa6.69□□□□□ -1.34
SNHG1-201ENST00000535076 CC2D1BQ5T0F9 858 aaKnown RBP6.69□□□□□ -1.34
SNHG1-201ENST00000535076 VASH1Q7L8A9 365 aaPredicted RBP6.69□□□□□ -1.34
SNHG1-201ENST00000535076 ZFP42Q96MM3 310 aa6.69□□□□□ -1.34
SNHG1-201ENST00000535076 GTPBP4Q9BZE4 634 aaKnown RBP6.69□□□□□ -1.34
SNHG1-201ENST00000535076 SNRKQ9NRH2 765 aa6.69□□□□□ -1.34
SNHG1-201ENST00000535076 ZC3H4Q9UPT8 1303 aaKnown RBP6.69□□□□□ -1.34
SNHG1-201ENST00000535076 DMTNQ08495 405 aa6.68□□□□□ -1.34
SNHG1-201ENST00000535076 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
SNHG1-201ENST00000535076 CASC1Q6TDU7 716 aa6.68□□□□□ -1.34
SNHG1-201ENST00000535076 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.68□□□□□ -1.34
SNHG1-201ENST00000535076 PNNQ9H307 717 aaKnown RBP6.68□□□□□ -1.34
SNHG1-201ENST00000535076 SOBPA7XYQ1 873 aa6.67□□□□□ -1.34
SNHG1-201ENST00000535076 LETM1O95202 739 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-201ENST00000535076 NFX1Q12986 1120 aaKnown RBP6.67□□□□□ -1.34
SNHG1-201ENST00000535076 OS9Q13438 667 aaPredicted RBP6.67□□□□□ -1.34
SNHG1-201ENST00000535076 HSP90AB4PQ58FF6 505 aa6.67□□□□□ -1.34
SNHG1-201ENST00000535076 HSP90AB3PQ58FF7 597 aa6.67□□□□□ -1.34
SNHG1-201ENST00000535076 EGFL6Q8IUX8 553 aa6.67□□□□□ -1.34
SNHG1-201ENST00000535076 PURBQ96QR8 312 aaKnown RBP6.67□□□□□ -1.34
SNHG1-201ENST00000535076 SENP2Q9HC62 589 aa6.67□□□□□ -1.34
SNHG1-201ENST00000535076 CWC22Q9HCG8 908 aaKnown RBP6.67□□□□□ -1.34
SNHG1-201ENST00000535076 PLEKHD1A6NEE1 506 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 PTK2Q05397 1052 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 CBLBQ13191 982 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 INTS6LQ5JSJ4 861 aaKnown RBP6.66□□□□□ -1.34
SNHG1-201ENST00000535076 PPP1R26Q5T8A7 1209 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-201ENST00000535076 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 MEIOBQ8N635 442 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 SLC10A4Q96EP9 437 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 KCTD15Q96SI1 283 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-201ENST00000535076 BSDC1Q9NW68 430 aaPredicted RBP6.66□□□□□ -1.34
SNHG1-201ENST00000535076 GPSM3Q9Y4H4 160 aa6.66□□□□□ -1.34
SNHG1-201ENST00000535076 FBXO45P0C2W1 286 aa6.65□□□□□ -1.34
SNHG1-201ENST00000535076 CCDC27Q2M243 656 aa6.65□□□□□ -1.34
SNHG1-201ENST00000535076 NBPF9Q3BBW0 867 aa6.65□□□□□ -1.34
SNHG1-201ENST00000535076 ZBTB33Q86T24 672 aa6.65□□□□□ -1.34
SNHG1-201ENST00000535076 CCDC116Q8IYX3 515 aa6.65□□□□□ -1.34
SNHG1-201ENST00000535076 SLC52A1Q9NWF4 448 aa6.65□□□□□ -1.34
SNHG1-201ENST00000535076 C6orf118Q5T5N4 469 aa6.64□□□□□ -1.35
SNHG1-201ENST00000535076 KIFC2Q96AC6 838 aa6.64□□□□□ -1.35
SNHG1-201ENST00000535076 VEGFBP49765 207 aa6.63□□□□□ -1.35
SNHG1-201ENST00000535076 BANK1Q8NDB2 785 aa6.63□□□□□ -1.35
SNHG1-201ENST00000535076 MKL1Q969V6 931 aa6.63□□□□□ -1.35
SNHG1-201ENST00000535076 TMPRSS4Q9NRS4 437 aa6.63□□□□□ -1.35
SNHG1-201ENST00000535076 RAI14Q9P0K7 980 aa6.63□□□□□ -1.35
SNHG1-201ENST00000535076 ESPNB1AK53 854 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 TERTO14746 1132 aaKnown RBP6.62□□□□□ -1.35
SNHG1-201ENST00000535076 NRDCO43847 1150 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 RAB15P59190 212 aa6.62□□□□□ -1.35
SNHG1-201ENST00000535076 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms