RNA–Protein interactions for RNA: ENST00000534946.5

LMO3-211, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-211ENST00000534946 COL3A1P02461 1466 aaPredicted RBP15.76■□□□□ 0.11
LMO3-211ENST00000534946 RGPD2P0DJD1 1756 aa15.75■□□□□ 0.11
LMO3-211ENST00000534946 CNGB1Q14028 1251 aaPredicted RBP15.75■□□□□ 0.11
LMO3-211ENST00000534946 PPP2R1AP30153 589 aa15.74■□□□□ 0.11
LMO3-211ENST00000534946 NBPF6Q5VWK0 638 aa15.74■□□□□ 0.11
LMO3-211ENST00000534946 NBPF4Q96M43 638 aa15.74■□□□□ 0.11
LMO3-211ENST00000534946 MEGF6O75095 1541 aa15.73■□□□□ 0.11
LMO3-211ENST00000534946 DCAF8L1A6NGE4 600 aa15.73■□□□□ 0.11
LMO3-211ENST00000534946 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
LMO3-211ENST00000534946 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
LMO3-211ENST00000534946 PKD1L3Q7Z443 1732 aa15.73■□□□□ 0.11
LMO3-211ENST00000534946 MYBBP1AQ9BQG0 1328 aaKnown RBP15.72■□□□□ 0.11
LMO3-211ENST00000534946 BCL9O00512 1426 aa15.72■□□□□ 0.11
LMO3-211ENST00000534946 EXOC5O00471 708 aa15.72■□□□□ 0.11
LMO3-211ENST00000534946 SOCS7O14512 581 aa15.72■□□□□ 0.11
LMO3-211ENST00000534946 KDRP35968 1356 aa15.72■□□□□ 0.11
LMO3-211ENST00000534946 IL13P35225 146 aa15.71■□□□□ 0.11
LMO3-211ENST00000534946 EYA1Q99502 592 aa15.71■□□□□ 0.11
LMO3-211ENST00000534946 NUDCQ9Y266 331 aa15.71■□□□□ 0.11
LMO3-211ENST00000534946 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
LMO3-211ENST00000534946 USHBP1Q8N6Y0 703 aa15.7■□□□□ 0.1
LMO3-211ENST00000534946 PCDH11XQ9BZA7 1347 aa15.69■□□□□ 0.1
LMO3-211ENST00000534946 PCDH11YQ9BZA8 1340 aa15.69■□□□□ 0.1
LMO3-211ENST00000534946 PRKRIP1Q9H875 184 aaPredicted RBP15.69■□□□□ 0.1
LMO3-211ENST00000534946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.69■□□□□ 0.1
LMO3-211ENST00000534946 CCDC125Q86Z20 511 aa15.68■□□□□ 0.1
LMO3-211ENST00000534946 SHANK3Q9BYB0 1731 aa15.68■□□□□ 0.1
LMO3-211ENST00000534946 ZCRB1Q8TBF4 217 aaKnown RBP15.67■□□□□ 0.1
LMO3-211ENST00000534946 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
LMO3-211ENST00000534946 EP400Q96L91 3159 aa15.65■□□□□ 0.1
LMO3-211ENST00000534946 ANP32CO43423 234 aa15.65■□□□□ 0.1
LMO3-211ENST00000534946 SF3B2Q13435 895 aaKnown RBP15.65■□□□□ 0.1
LMO3-211ENST00000534946 AMOTQ4VCS5 1084 aa15.65■□□□□ 0.1
LMO3-211ENST00000534946 SULT6B1Q6IMI4 303 aa15.65■□□□□ 0.1
LMO3-211ENST00000534946 NHSQ6T4R5 1651 aa15.64■□□□□ 0.09
LMO3-211ENST00000534946 U2SURPO15042 1029 aaKnown RBP15.64■□□□□ 0.09
LMO3-211ENST00000534946 TNS1Q9HBL0 1735 aaKnown RBP15.64■□□□□ 0.09
LMO3-211ENST00000534946 PLEKHO1Q53GL0 409 aaPredicted RBP15.63■□□□□ 0.09
LMO3-211ENST00000534946 MARCH10Q8NA82 808 aaPredicted RBP15.63■□□□□ 0.09
LMO3-211ENST00000534946 UPF1Q92900 1129 aaKnown RBP eCLIP15.63■□□□□ 0.09
LMO3-211ENST00000534946 RGPD3A6NKT7 1758 aaPredicted RBP15.62■□□□□ 0.09
LMO3-211ENST00000534946 RGPD4Q7Z3J3 1758 aa15.62■□□□□ 0.09
LMO3-211ENST00000534946 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
LMO3-211ENST00000534946 HSP90AB1P08238 724 aaKnown RBP15.61■□□□□ 0.09
LMO3-211ENST00000534946 SAMD1Q6SPF0 538 aaPredicted RBP15.61■□□□□ 0.09
LMO3-211ENST00000534946 AEBP1Q8IUX7 1158 aa15.61■□□□□ 0.09
LMO3-211ENST00000534946 DDX54Q8TDD1 881 aaKnown RBP15.61■□□□□ 0.09
LMO3-211ENST00000534946 SBF2Q86WG5 1849 aa15.6■□□□□ 0.09
LMO3-211ENST00000534946 NEFMP07197 916 aa15.6■□□□□ 0.09
LMO3-211ENST00000534946 U2AF1L5P0DN76 240 aaPredicted RBP15.6■□□□□ 0.09
LMO3-211ENST00000534946 U2AF1Q01081 240 aaKnown RBP eCLIP15.6■□□□□ 0.09
LMO3-211ENST00000534946 PNNQ9H307 717 aaKnown RBP15.6■□□□□ 0.09
LMO3-211ENST00000534946 HMOX1P09601 288 aa15.59■□□□□ 0.09
LMO3-211ENST00000534946 BAG6P46379 1132 aa15.59■□□□□ 0.09
LMO3-211ENST00000534946 C1orf141Q5JVX7 400 aa15.59■□□□□ 0.09
LMO3-211ENST00000534946 FAM182BQ5T319 152 aa15.59■□□□□ 0.09
LMO3-211ENST00000534946 IFNL2Q8IZJ0 200 aa15.59■□□□□ 0.09
LMO3-211ENST00000534946 FCHSD2O94868 740 aa15.58■□□□□ 0.08
LMO3-211ENST00000534946 ZNF530Q6P9A1 599 aaPredicted RBP15.58■□□□□ 0.08
LMO3-211ENST00000534946 BCL11BQ9C0K0 894 aaPredicted RBP15.58■□□□□ 0.08
LMO3-211ENST00000534946 CYP27B1O15528 508 aa15.57■□□□□ 0.08
LMO3-211ENST00000534946 PHKG2P15735 406 aa15.57■□□□□ 0.08
LMO3-211ENST00000534946 WDR43Q15061 677 aaKnown RBP eCLIP15.57■□□□□ 0.08
LMO3-211ENST00000534946 NKX1-1Q15270 411 aaPredicted RBP15.57■□□□□ 0.08
LMO3-211ENST00000534946 GAS2L2Q8NHY3 880 aa15.57■□□□□ 0.08
LMO3-211ENST00000534946 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
LMO3-211ENST00000534946 TRIM37O94972 964 aa15.56■□□□□ 0.08
LMO3-211ENST00000534946 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
LMO3-211ENST00000534946 PRKAR2BP31323 418 aa15.55■□□□□ 0.08
LMO3-211ENST00000534946 DCAF5Q96JK2 942 aa15.55■□□□□ 0.08
LMO3-211ENST00000534946 MAPK8IP3Q9UPT6 1336 aa15.54■□□□□ 0.08
LMO3-211ENST00000534946 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
LMO3-211ENST00000534946 MAP3K5Q99683 1374 aa15.53■□□□□ 0.08
LMO3-211ENST00000534946 BTAF1O14981 1849 aa15.53■□□□□ 0.08
LMO3-211ENST00000534946 MRC1P22897 1456 aa15.52■□□□□ 0.08
LMO3-211ENST00000534946 ADAMTS7Q9UKP4 1686 aa15.52■□□□□ 0.08
LMO3-211ENST00000534946 APBA3O96018 575 aa15.52■□□□□ 0.08
LMO3-211ENST00000534946 U3KPZ7 1027 aaPredicted RBP15.52■□□□□ 0.08
LMO3-211ENST00000534946 KDM6AO15550 1401 aaPredicted RBP15.51■□□□□ 0.07
LMO3-211ENST00000534946 RREB1Q92766 1687 aa15.51■□□□□ 0.07
LMO3-211ENST00000534946 PLSCR1O15162 318 aa15.51■□□□□ 0.07
LMO3-211ENST00000534946 HMGB2P26583 209 aaKnown RBP15.51■□□□□ 0.07
LMO3-211ENST00000534946 SYTL4Q96C24 671 aaPredicted RBP15.51■□□□□ 0.07
LMO3-211ENST00000534946 ACSBG1Q96GR2 724 aa15.51■□□□□ 0.07
LMO3-211ENST00000534946 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
LMO3-211ENST00000534946 ERVV-2B6SEH9 535 aa15.5■□□□□ 0.07
LMO3-211ENST00000534946 MTHFSDQ2M296 383 aaKnown RBP15.5■□□□□ 0.07
LMO3-211ENST00000534946 TMOD3Q9NYL9 352 aa15.5■□□□□ 0.07
LMO3-211ENST00000534946 PRIM1P49642 420 aaKnown RBP15.49■□□□□ 0.07
LMO3-211ENST00000534946 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
LMO3-211ENST00000534946 ITGB4P16144 1822 aa15.49■□□□□ 0.07
LMO3-211ENST00000534946 GNAT3A8MTJ3 354 aa15.48■□□□□ 0.07
LMO3-211ENST00000534946 KCNQ2O43526 872 aa15.48■□□□□ 0.07
LMO3-211ENST00000534946 SMARCC1Q92922 1105 aaPredicted RBP15.48■□□□□ 0.07
LMO3-211ENST00000534946 HTATSF1O43719 755 aaKnown RBP15.47■□□□□ 0.07
LMO3-211ENST00000534946 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
LMO3-211ENST00000534946 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
LMO3-211ENST00000534946 RTF1Q92541 710 aaKnown RBP15.46■□□□□ 0.07
LMO3-211ENST00000534946 RUNDC1Q96C34 613 aa15.46■□□□□ 0.07
LMO3-211ENST00000534946 CAMKK2Q96RR4 588 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms