RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 PDGFDQ9GZP0 370 aaPredicted RBP26.06■■□□□ 1.76
NDUFS3-213ENST00000534716 PAPPAQ13219 1627 aa26.06■■□□□ 1.76
NDUFS3-213ENST00000534716 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
NDUFS3-213ENST00000534716 EMILIN1Q9Y6C2 1016 aa26.05■■□□□ 1.76
NDUFS3-213ENST00000534716 SHANK3Q9BYB0 1731 aa26.05■■□□□ 1.76
NDUFS3-213ENST00000534716 SLC27A3Q5K4L6 730 aa26.04■■□□□ 1.76
NDUFS3-213ENST00000534716 USHBP1Q8N6Y0 703 aa26.04■■□□□ 1.76
NDUFS3-213ENST00000534716 TATP17735 454 aaPredicted RBP26.03■■□□□ 1.76
NDUFS3-213ENST00000534716 PRIM1P49642 420 aaKnown RBP26.03■■□□□ 1.76
NDUFS3-213ENST00000534716 LRRC4BQ9NT99 713 aa26.03■■□□□ 1.76
NDUFS3-213ENST00000534716 NSD2O96028 1365 aa26.03■■□□□ 1.76
NDUFS3-213ENST00000534716 PPP1R1BQ9UD71 204 aaPredicted RBP26.02■■□□□ 1.76
NDUFS3-213ENST00000534716 WASHC2AQ641Q2 1341 aa26.02■■□□□ 1.76
NDUFS3-213ENST00000534716 NCAPD2Q15021 1401 aa26.02■■□□□ 1.76
NDUFS3-213ENST00000534716 ANKRD26Q9UPS8 1709 aa26.02■■□□□ 1.76
NDUFS3-213ENST00000534716 ZBTB7AO95365 584 aa25.99■■□□□ 1.75
NDUFS3-213ENST00000534716 PTGER2P43116 358 aa25.99■■□□□ 1.75
NDUFS3-213ENST00000534716 PCDH11XQ9BZA7 1347 aa25.98■■□□□ 1.75
NDUFS3-213ENST00000534716 PCDH11YQ9BZA8 1340 aa25.98■■□□□ 1.75
NDUFS3-213ENST00000534716 DOT1LQ8TEK3 1739 aa25.98■■□□□ 1.75
NDUFS3-213ENST00000534716 SYTL4Q96C24 671 aaPredicted RBP25.98■■□□□ 1.75
NDUFS3-213ENST00000534716 MTFR1LQ9H019 292 aa25.98■■□□□ 1.75
NDUFS3-213ENST00000534716 POLKQ9UBT6 870 aa25.98■■□□□ 1.75
NDUFS3-213ENST00000534716 AKT1S1Q96B36 256 aa25.97■■□□□ 1.75
NDUFS3-213ENST00000534716 POLR3GLQ9BT43 218 aa25.97■■□□□ 1.75
NDUFS3-213ENST00000534716 ZNF827Q17R98 1081 aa25.96■■□□□ 1.75
NDUFS3-213ENST00000534716 PPM1GO15355 546 aaPredicted RBP25.95■■□□□ 1.74
NDUFS3-213ENST00000534716 YY1P25490 414 aa25.95■■□□□ 1.74
NDUFS3-213ENST00000534716 PANK3Q9H999 370 aa25.95■■□□□ 1.74
NDUFS3-213ENST00000534716 SGIP1Q9BQI5 828 aa25.94■■□□□ 1.74
NDUFS3-213ENST00000534716 CYP27B1O15528 508 aa25.93■■□□□ 1.74
NDUFS3-213ENST00000534716 ATF5Q9Y2D1 282 aaPredicted RBP25.93■■□□□ 1.74
NDUFS3-213ENST00000534716 LY75O60449 1722 aa25.91■■□□□ 1.74
NDUFS3-213ENST00000534716 EYA1Q99502 592 aa25.91■■□□□ 1.74
NDUFS3-213ENST00000534716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.91■■□□□ 1.74
NDUFS3-213ENST00000534716 PKD1L3Q7Z443 1732 aa25.9■■□□□ 1.74
NDUFS3-213ENST00000534716 MAP2P11137 1827 aaKnown RBP25.89■■□□□ 1.74
NDUFS3-213ENST00000534716 NKX1-1Q15270 411 aaPredicted RBP25.89■■□□□ 1.74
NDUFS3-213ENST00000534716 SLC16A10Q8TF71 515 aa25.89■■□□□ 1.74
NDUFS3-213ENST00000534716 PLEKHG2Q9H7P9 1386 aa25.89■■□□□ 1.74
NDUFS3-213ENST00000534716 KAT6BQ8WYB5 2073 aa25.89■■□□□ 1.73
NDUFS3-213ENST00000534716 SPG7Q9UQ90 795 aa25.88■■□□□ 1.73
NDUFS3-213ENST00000534716 QSER1Q2KHR3 1735 aa25.88■■□□□ 1.73
NDUFS3-213ENST00000534716 EIF4A2Q14240 407 aaKnown RBP25.87■■□□□ 1.73
NDUFS3-213ENST00000534716 CCNL1Q9UK58 526 aaPredicted RBP25.87■■□□□ 1.73
NDUFS3-213ENST00000534716 TNNT2P45379 298 aaPredicted RBP25.86■■□□□ 1.73
NDUFS3-213ENST00000534716 KCNQ4P56696 695 aa25.86■■□□□ 1.73
NDUFS3-213ENST00000534716 PNPLA7Q6ZV29 1317 aa25.86■■□□□ 1.73
NDUFS3-213ENST00000534716 HMGB2P26583 209 aaKnown RBP25.85■■□□□ 1.73
NDUFS3-213ENST00000534716 TFCP2L1Q9NZI6 479 aa25.84■■□□□ 1.73
NDUFS3-213ENST00000534716 IGSF1Q8N6C5 1336 aa25.83■■□□□ 1.73
NDUFS3-213ENST00000534716 DCAF8L1A6NGE4 600 aa25.82■■□□□ 1.72
NDUFS3-213ENST00000534716 MPRIPQ6WCQ1 1025 aa25.82■■□□□ 1.72
NDUFS3-213ENST00000534716 ARXQ96QS3 562 aa25.82■■□□□ 1.72
NDUFS3-213ENST00000534716 SYT17Q9BSW7 474 aa25.82■■□□□ 1.72
NDUFS3-213ENST00000534716 MAP3K5Q99683 1374 aa25.82■■□□□ 1.72
NDUFS3-213ENST00000534716 FHDC1Q9C0D6 1143 aaPredicted RBP25.81■■□□□ 1.72
NDUFS3-213ENST00000534716 KNSTRNQ9Y448 316 aa25.81■■□□□ 1.72
NDUFS3-213ENST00000534716 PALLDQ8WX93 1383 aa25.81■■□□□ 1.72
NDUFS3-213ENST00000534716 TOGARAM1Q9Y4F4 1720 aa25.8■■□□□ 1.72
NDUFS3-213ENST00000534716 MORC1Q86VD1 984 aa25.8■■□□□ 1.72
NDUFS3-213ENST00000534716 SMARCC1Q92922 1105 aaPredicted RBP25.8■■□□□ 1.72
NDUFS3-213ENST00000534716 PIGBQ92521 554 aa25.79■■□□□ 1.72
NDUFS3-213ENST00000534716 KIF7Q2M1P5 1343 aa25.79■■□□□ 1.72
NDUFS3-213ENST00000534716 COL24A1Q17RW2 1714 aa25.78■■□□□ 1.72
NDUFS3-213ENST00000534716 PHKG2P15735 406 aa25.78■■□□□ 1.72
NDUFS3-213ENST00000534716 IFNL2Q8IZJ0 200 aa25.78■■□□□ 1.72
NDUFS3-213ENST00000534716 UTRNP46939 3433 aa25.78■■□□□ 1.72
NDUFS3-213ENST00000534716 AMER1Q5JTC6 1135 aaPredicted RBP25.76■■□□□ 1.71
NDUFS3-213ENST00000534716 TUBGCP6Q96RT7 1819 aa25.76■■□□□ 1.71
NDUFS3-213ENST00000534716 ITGB4P16144 1822 aa25.74■■□□□ 1.71
NDUFS3-213ENST00000534716 C5P01031 1676 aa25.74■■□□□ 1.71
NDUFS3-213ENST00000534716 POLD1P28340 1107 aa25.73■■□□□ 1.71
NDUFS3-213ENST00000534716 COL23A1Q86Y22 540 aaPredicted RBP25.73■■□□□ 1.71
NDUFS3-213ENST00000534716 TMOD3Q9NYL9 352 aa25.72■■□□□ 1.71
NDUFS3-213ENST00000534716 PER1O15534 1290 aaPredicted RBP25.71■■□□□ 1.71
NDUFS3-213ENST00000534716 FLAD1Q8NFF5 587 aa25.71■■□□□ 1.71
NDUFS3-213ENST00000534716 HSP90AB1P08238 724 aaKnown RBP25.69■■□□□ 1.7
NDUFS3-213ENST00000534716 AMOTQ4VCS5 1084 aa25.69■■□□□ 1.7
NDUFS3-213ENST00000534716 PLEKHO1Q53GL0 409 aaPredicted RBP25.69■■□□□ 1.7
NDUFS3-213ENST00000534716 LOC102724428A0A0B4J2F2 783 aa25.68■■□□□ 1.7
NDUFS3-213ENST00000534716 ERVV-2B6SEH9 535 aa25.68■■□□□ 1.7
NDUFS3-213ENST00000534716 SIK1P57059 783 aa25.68■■□□□ 1.7
NDUFS3-213ENST00000534716 DCAF5Q96JK2 942 aa25.68■■□□□ 1.7
NDUFS3-213ENST00000534716 KDRP35968 1356 aa25.68■■□□□ 1.7
NDUFS3-213ENST00000534716 TAF1LQ8IZX4 1826 aa25.67■■□□□ 1.7
NDUFS3-213ENST00000534716 IL13P35225 146 aa25.67■■□□□ 1.7
NDUFS3-213ENST00000534716 ASAP1Q9ULH1 1129 aa25.67■■□□□ 1.7
NDUFS3-213ENST00000534716 C4BP0C0L5 1744 aa25.66■■□□□ 1.7
NDUFS3-213ENST00000534716 MSH5O43196 834 aa25.65■■□□□ 1.7
NDUFS3-213ENST00000534716 ATG3Q9NT62 314 aa25.65■■□□□ 1.7
NDUFS3-213ENST00000534716 AEBP1Q8IUX7 1158 aa25.64■■□□□ 1.7
NDUFS3-213ENST00000534716 AK7Q96M32 723 aa25.64■■□□□ 1.7
NDUFS3-213ENST00000534716 SULT6B1Q6IMI4 303 aa25.62■■□□□ 1.69
NDUFS3-213ENST00000534716 ZNF530Q6P9A1 599 aaPredicted RBP25.62■■□□□ 1.69
NDUFS3-213ENST00000534716 NPC1L1Q9UHC9 1359 aa25.61■■□□□ 1.69
NDUFS3-213ENST00000534716 SSFA2P28290 1259 aa25.61■■□□□ 1.69
NDUFS3-213ENST00000534716 LINC00116Q8NCU8 138 aa25.61■■□□□ 1.69
NDUFS3-213ENST00000534716 KDM6AO15550 1401 aaPredicted RBP25.61■■□□□ 1.69
NDUFS3-213ENST00000534716 GOLGB1Q14789 3259 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms