RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 BCL11BQ9C0K0 894 aaPredicted RBP8.34□□□□□ -1.07
RAG1-203ENST00000534663 SHPRHQ149N8 1683 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 QRICH2Q9H0J4 1663 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 STK31Q9BXU1 1019 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 CEP85Q6P2H3 762 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 GPT2Q8TD30 523 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 TMX3Q96JJ7 454 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 SLC52A1Q9NWF4 448 aa8.33□□□□□ -1.08
RAG1-203ENST00000534663 FOXO3O43524 673 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 G2E3Q7L622 706 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 RPAP2Q8IXW5 612 aaPredicted RBP8.32□□□□□ -1.08
RAG1-203ENST00000534663 ANKRD44Q8N8A2 993 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 DDX54Q8TDD1 881 aaKnown RBP8.32□□□□□ -1.08
RAG1-203ENST00000534663 CWC22Q9HCG8 908 aaKnown RBP8.32□□□□□ -1.08
RAG1-203ENST00000534663 OS9Q13438 667 aaPredicted RBP8.32□□□□□ -1.08
RAG1-203ENST00000534663 NUTM2GQ5VZR2 741 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 ABCC4O15439 1325 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 TSPOAP1O95153 1857 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 IL13P35225 146 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 MROH2AA6NES4 1674 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 TULP4Q9NRJ4 1543 aa8.32□□□□□ -1.08
RAG1-203ENST00000534663 OFD1O75665 1012 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
RAG1-203ENST00000534663 HSP90AB2PQ58FF8 381 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 NUTM1Q86Y26 1132 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 NUDT16Q96DE0 195 aaKnown RBP8.31□□□□□ -1.08
RAG1-203ENST00000534663 PRDM10Q9NQV6 1147 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 EFCAB6Q5THR3 1501 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 MSH6P52701 1360 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.31□□□□□ -1.08
RAG1-203ENST00000534663 FAM177BA6PVY3 158 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 FIBPO43427 364 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 EIF2S2P20042 333 aaKnown RBP8.31□□□□□ -1.08
RAG1-203ENST00000534663 ABCA9Q8IUA7 1624 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 PDE1AP54750 535 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 KIAA2012Q0VF49 1180 aa8.31□□□□□ -1.08
RAG1-203ENST00000534663 TSC1Q92574 1164 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
RAG1-203ENST00000534663 PPP1R9BQ96SB3 815 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 PDCL3Q9H2J4 239 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 TSPY26PQ9H489 355 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 USP25Q9UHP3 1055 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 PALD1Q9ULE6 856 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 C17orf53Q8N3J3 647 aaPredicted RBP8.3□□□□□ -1.08
RAG1-203ENST00000534663 PUS7Q96PZ0 661 aaKnown RBP8.3□□□□□ -1.08
RAG1-203ENST00000534663 NCOA3Q9Y6Q9 1424 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 KCNJ4P48050 445 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 AMPHP49418 695 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 LRSAM1Q6UWE0 723 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 LRRCC1Q9C099 1032 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
RAG1-203ENST00000534663 YTHDC2Q9H6S0 1430 aaKnown RBP8.3□□□□□ -1.08
RAG1-203ENST00000534663 GNAI2P04899 355 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 ZNF445P59923 1031 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 NCBP3Q53F19 620 aaKnown RBP8.29□□□□□ -1.08
RAG1-203ENST00000534663 ZDHHC9Q9Y397 364 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 GADD45BO75293 160 aaPredicted RBP8.29□□□□□ -1.08
RAG1-203ENST00000534663 MBD3O95983 291 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 MX1P20591 662 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 SURF6O75683 361 aaKnown RBP8.29□□□□□ -1.08
RAG1-203ENST00000534663 EIF4A2Q14240 407 aaKnown RBP8.29□□□□□ -1.08
RAG1-203ENST00000534663 SPC24Q8NBT2 197 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 JARID2Q92833 1246 aaPredicted RBP8.29□□□□□ -1.08
RAG1-203ENST00000534663 ZKSCAN5Q9Y2L8 839 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 CCDC61Q9Y6R9 512 aa8.29□□□□□ -1.08
RAG1-203ENST00000534663 VPS37CA5D8V6 355 aaPredicted RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 WASLO00401 505 aaPredicted RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 TTC12Q9H892 705 aaPredicted RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 NOL7Q9UMY1 257 aaKnown RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 RIMS2Q9UQ26 1411 aa8.28□□□□□ -1.08
RAG1-203ENST00000534663 KIAA1210Q9ULL0 1709 aa8.28□□□□□ -1.08
RAG1-203ENST00000534663 CPA1P15085 419 aa8.28□□□□□ -1.08
RAG1-203ENST00000534663 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 ADGRB1O14514 1584 aa8.28□□□□□ -1.08
RAG1-203ENST00000534663 HCLS1P14317 486 aaPredicted RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 TAOK2Q9UL54 1235 aa8.28□□□□□ -1.08
RAG1-203ENST00000534663 LRRFIP2Q9Y608 721 aaKnown RBP8.28□□□□□ -1.08
RAG1-203ENST00000534663 LRRC7Q96NW7 1537 aa8.28□□□□□ -1.08
RAG1-203ENST00000534663 ADGRB3O60242 1522 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 PNMA6EA0A0J9YXQ4 647 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 ZNF853P0CG23 659 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 CWC27Q6UX04 472 aaKnown RBP8.27□□□□□ -1.09
RAG1-203ENST00000534663 CSPP1Q1MSJ5 1256 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 USP48Q86UV5 1035 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 ESYT1Q9BSJ8 1104 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 SPG7Q9UQ90 795 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 UNC5CLQ8IV45 518 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 DRC7Q8IY82 874 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 NGDNQ8NEJ9 315 aaKnown RBP8.27□□□□□ -1.09
RAG1-203ENST00000534663 CNPY2Q9Y2B0 182 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 FAM135BQ49AJ0 1406 aa8.27□□□□□ -1.09
RAG1-203ENST00000534663 RTL1A6NKG5 1358 aa8.26□□□□□ -1.09
RAG1-203ENST00000534663 PHF14O94880 888 aa8.26□□□□□ -1.09
RAG1-203ENST00000534663 UBTFL1P0CB47 393 aaPredicted RBP8.26□□□□□ -1.09
RAG1-203ENST00000534663 POGZQ7Z3K3 1410 aa8.26□□□□□ -1.09
RAG1-203ENST00000534663 NRXN1Q9ULB1 1477 aa8.26□□□□□ -1.09
RAG1-203ENST00000534663 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
RAG1-203ENST00000534663 FERMT3Q86UX7 667 aa8.26□□□□□ -1.09
RAG1-203ENST00000534663 SMC3Q9UQE7 1217 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms