RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 FHDC1Q9C0D6 1143 aaPredicted RBP16.26■□□□□ 0.19
CTNND1-238ENST00000534647 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
CTNND1-238ENST00000534647 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
CTNND1-238ENST00000534647 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
CTNND1-238ENST00000534647 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
CTNND1-238ENST00000534647 SLC16A10Q8TF71 515 aa16.25■□□□□ 0.19
CTNND1-238ENST00000534647 AKT1S1Q96B36 256 aa16.25■□□□□ 0.19
CTNND1-238ENST00000534647 MYOM1P52179 1685 aa16.24■□□□□ 0.19
CTNND1-238ENST00000534647 MAP3K19Q56UN5 1328 aa16.24■□□□□ 0.19
CTNND1-238ENST00000534647 HOXC9P31274 260 aa16.24■□□□□ 0.19
CTNND1-238ENST00000534647 ARXQ96QS3 562 aa16.24■□□□□ 0.19
CTNND1-238ENST00000534647 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
CTNND1-238ENST00000534647 ZNF827Q17R98 1081 aa16.23■□□□□ 0.19
CTNND1-238ENST00000534647 DDX54Q8TDD1 881 aaKnown RBP16.23■□□□□ 0.19
CTNND1-238ENST00000534647 BTAF1O14981 1849 aa16.22■□□□□ 0.19
CTNND1-238ENST00000534647 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
CTNND1-238ENST00000534647 AMPHP49418 695 aa16.21■□□□□ 0.19
CTNND1-238ENST00000534647 ZCRB1Q8TBF4 217 aaKnown RBP16.21■□□□□ 0.19
CTNND1-238ENST00000534647 LTV1Q96GA3 475 aaPredicted RBP16.21■□□□□ 0.19
CTNND1-238ENST00000534647 ANKRD36BQ8N2N9 1353 aa16.21■□□□□ 0.19
CTNND1-238ENST00000534647 PRIM1P49642 420 aaKnown RBP16.2■□□□□ 0.18
CTNND1-238ENST00000534647 RTL1A6NKG5 1358 aa16.2■□□□□ 0.18
CTNND1-238ENST00000534647 CGNL1Q0VF96 1302 aa16.19■□□□□ 0.18
CTNND1-238ENST00000534647 FYB1O15117 783 aa16.19■□□□□ 0.18
CTNND1-238ENST00000534647 FBLN1P23142 703 aa16.18■□□□□ 0.18
CTNND1-238ENST00000534647 ZNF784Q8NCA9 323 aaPredicted RBP16.18■□□□□ 0.18
CTNND1-238ENST00000534647 NSD2O96028 1365 aa16.17■□□□□ 0.18
CTNND1-238ENST00000534647 VASPP50552 380 aaPredicted RBP16.17■□□□□ 0.18
CTNND1-238ENST00000534647 NBPF6Q5VWK0 638 aa16.17■□□□□ 0.18
CTNND1-238ENST00000534647 NBPF4Q96M43 638 aa16.17■□□□□ 0.18
CTNND1-238ENST00000534647 PNPLA7Q6ZV29 1317 aa16.17■□□□□ 0.18
CTNND1-238ENST00000534647 HMGB2P26583 209 aaKnown RBP16.16■□□□□ 0.18
CTNND1-238ENST00000534647 TMF1P82094 1093 aa16.16■□□□□ 0.18
CTNND1-238ENST00000534647 TFCP2L1Q9NZI6 479 aa16.16■□□□□ 0.18
CTNND1-238ENST00000534647 QSER1Q2KHR3 1735 aa16.16■□□□□ 0.18
CTNND1-238ENST00000534647 KIF24Q5T7B8 1368 aa16.15■□□□□ 0.18
CTNND1-238ENST00000534647 POLD1P28340 1107 aa16.15■□□□□ 0.18
CTNND1-238ENST00000534647 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
CTNND1-238ENST00000534647 MEGF6O75095 1541 aa16.14■□□□□ 0.18
CTNND1-238ENST00000534647 COL24A1Q17RW2 1714 aa16.14■□□□□ 0.17
CTNND1-238ENST00000534647 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
CTNND1-238ENST00000534647 INSRP06213 1382 aa16.13■□□□□ 0.17
CTNND1-238ENST00000534647 RRS1Q15050 365 aaKnown RBP16.13■□□□□ 0.17
CTNND1-238ENST00000534647 RAPGEF4Q8WZA2 1011 aa16.13■□□□□ 0.17
CTNND1-238ENST00000534647 GGNBP2Q9H3C7 697 aa16.13■□□□□ 0.17
CTNND1-238ENST00000534647 KAT6BQ8WYB5 2073 aa16.13■□□□□ 0.17
CTNND1-238ENST00000534647 TULP1O00294 542 aaPredicted RBP16.12■□□□□ 0.17
CTNND1-238ENST00000534647 KCNQ4P56696 695 aa16.12■□□□□ 0.17
CTNND1-238ENST00000534647 CCNL1Q9UK58 526 aaPredicted RBP16.12■□□□□ 0.17
CTNND1-238ENST00000534647 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
CTNND1-238ENST00000534647 LY75O60449 1722 aa16.11■□□□□ 0.17
CTNND1-238ENST00000534647 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
CTNND1-238ENST00000534647 USP47Q96K76 1375 aa16.11■□□□□ 0.17
CTNND1-238ENST00000534647 TATP17735 454 aaPredicted RBP16.1■□□□□ 0.17
CTNND1-238ENST00000534647 GPR162Q16538 588 aa16.1■□□□□ 0.17
CTNND1-238ENST00000534647 HSP90AB2PQ58FF8 381 aa16.1■□□□□ 0.17
CTNND1-238ENST00000534647 SHANK3Q9BYB0 1731 aa16.1■□□□□ 0.17
CTNND1-238ENST00000534647 FLT4P35916 1363 aa16.1■□□□□ 0.17
CTNND1-238ENST00000534647 DOT1LQ8TEK3 1739 aa16.09■□□□□ 0.17
CTNND1-238ENST00000534647 IFNLR1Q8IU57 520 aaPredicted RBP16.09■□□□□ 0.17
CTNND1-238ENST00000534647 BBXQ8WY36 941 aaPredicted RBP16.09■□□□□ 0.17
CTNND1-238ENST00000534647 PCDH11XQ9BZA7 1347 aa16.09■□□□□ 0.17
CTNND1-238ENST00000534647 PCDH11YQ9BZA8 1340 aa16.09■□□□□ 0.17
CTNND1-238ENST00000534647 CHD4Q14839 1912 aa16.08■□□□□ 0.16
CTNND1-238ENST00000534647 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
CTNND1-238ENST00000534647 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
CTNND1-238ENST00000534647 FLAD1Q8NFF5 587 aa16.08■□□□□ 0.16
CTNND1-238ENST00000534647 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
CTNND1-238ENST00000534647 RGPD2P0DJD1 1756 aa16.08■□□□□ 0.16
CTNND1-238ENST00000534647 CYP27B1O15528 508 aa16.06■□□□□ 0.16
CTNND1-238ENST00000534647 NKX1-1Q15270 411 aaPredicted RBP16.06■□□□□ 0.16
CTNND1-238ENST00000534647 NCAPD2Q15021 1401 aa16.05■□□□□ 0.16
CTNND1-238ENST00000534647 NLGN2Q8NFZ4 835 aa16.05■□□□□ 0.16
CTNND1-238ENST00000534647 TUBGCP6Q96RT7 1819 aa16.04■□□□□ 0.16
CTNND1-238ENST00000534647 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
CTNND1-238ENST00000534647 C1QTNF8P60827 252 aa16.04■□□□□ 0.16
CTNND1-238ENST00000534647 SMARCC1Q92922 1105 aaPredicted RBP16.04■□□□□ 0.16
CTNND1-238ENST00000534647 UTRNP46939 3433 aa16.04■□□□□ 0.16
CTNND1-238ENST00000534647 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
CTNND1-238ENST00000534647 WASHC2AQ641Q2 1341 aa16.03■□□□□ 0.16
CTNND1-238ENST00000534647 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
CTNND1-238ENST00000534647 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.03■□□□□ 0.163e-10■□□□□ 9.7
CTNND1-238ENST00000534647 CD2APQ9Y5K6 639 aa16.03■□□□□ 0.16
CTNND1-238ENST00000534647 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
CTNND1-238ENST00000534647 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
CTNND1-238ENST00000534647 SPG7Q9UQ90 795 aa16.01■□□□□ 0.15
CTNND1-238ENST00000534647 YBX3P16989 372 aaKnown RBP eCLIP16■□□□□ 0.15
CTNND1-238ENST00000534647 PAXIP1Q6ZW49 1069 aaPredicted RBP16■□□□□ 0.15
CTNND1-238ENST00000534647 PIGBQ92521 554 aa16■□□□□ 0.15
CTNND1-238ENST00000534647 NSD3Q9BZ95 1437 aa16■□□□□ 0.15
CTNND1-238ENST00000534647 KIF20BQ96Q89 1820 aa15.99■□□□□ 0.15
CTNND1-238ENST00000534647 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
CTNND1-238ENST00000534647 PELP1Q8IZL8 1130 aaKnown RBP15.99■□□□□ 0.15
CTNND1-238ENST00000534647 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
CTNND1-238ENST00000534647 C5P01031 1676 aa15.99■□□□□ 0.15
CTNND1-238ENST00000534647 EYA1Q99502 592 aa15.98■□□□□ 0.15
CTNND1-238ENST00000534647 POLKQ9UBT6 870 aa15.98■□□□□ 0.15
CTNND1-238ENST00000534647 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
CTNND1-238ENST00000534647 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
CTNND1-238ENST00000534647 MSL1Q68DK7 614 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms