RNA–Protein interactions for RNA: ENST00000534557.1

VPS51-215, Transcript of VPS51, GARP complex subunit, humanhuman

APPRIS ALT2 TSL 3

Gene VPS51, Length 854 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-215ENST00000534557 PPM1GO15355 546 aaPredicted RBP25.29■■□□□ 1.64
VPS51-215ENST00000534557 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
VPS51-215ENST00000534557 ZBTB7AO95365 584 aa25.28■■□□□ 1.64
VPS51-215ENST00000534557 HMGB2P26583 209 aaKnown RBP25.28■■□□□ 1.64
VPS51-215ENST00000534557 NHSQ6T4R5 1651 aa25.27■■□□□ 1.64
VPS51-215ENST00000534557 USHBP1Q8N6Y0 703 aa25.26■■□□□ 1.63
VPS51-215ENST00000534557 MTFR1LQ9H019 292 aa25.25■■□□□ 1.63
VPS51-215ENST00000534557 ATF5Q9Y2D1 282 aaPredicted RBP25.25■■□□□ 1.63
VPS51-215ENST00000534557 PDGFDQ9GZP0 370 aaPredicted RBP25.23■■□□□ 1.63
VPS51-215ENST00000534557 HSPA5P11021 654 aaKnown RBP25.22■■□□□ 1.63
VPS51-215ENST00000534557 EMILIN1Q9Y6C2 1016 aa25.22■■□□□ 1.63
VPS51-215ENST00000534557 PCDH11XQ9BZA7 1347 aa25.21■■□□□ 1.63
VPS51-215ENST00000534557 PCDH11YQ9BZA8 1340 aa25.21■■□□□ 1.63
VPS51-215ENST00000534557 MEGF6O75095 1541 aa25.2■■□□□ 1.62
VPS51-215ENST00000534557 KIF20BQ96Q89 1820 aa25.19■■□□□ 1.62
VPS51-215ENST00000534557 WASHC2AQ641Q2 1341 aa25.19■■□□□ 1.62
VPS51-215ENST00000534557 LRRC4BQ9NT99 713 aa25.19■■□□□ 1.62
VPS51-215ENST00000534557 TFCP2L1Q9NZI6 479 aa25.18■■□□□ 1.62
VPS51-215ENST00000534557 SPG7Q9UQ90 795 aa25.18■■□□□ 1.62
VPS51-215ENST00000534557 BTAF1O14981 1849 aa25.17■■□□□ 1.62
VPS51-215ENST00000534557 SLC16A10Q8TF71 515 aa25.17■■□□□ 1.62
VPS51-215ENST00000534557 PTGER2P43116 358 aa25.16■■□□□ 1.62
VPS51-215ENST00000534557 CCNL1Q9UK58 526 aaPredicted RBP25.16■■□□□ 1.62
VPS51-215ENST00000534557 TNNT2P45379 298 aaPredicted RBP25.15■■□□□ 1.62
VPS51-215ENST00000534557 PANK3Q9H999 370 aa25.15■■□□□ 1.62
VPS51-215ENST00000534557 ZNF827Q17R98 1081 aa25.14■■□□□ 1.62
VPS51-215ENST00000534557 AKT1S1Q96B36 256 aa25.14■■□□□ 1.62
VPS51-215ENST00000534557 POLKQ9UBT6 870 aa25.14■■□□□ 1.62
VPS51-215ENST00000534557 MYOM1P52179 1685 aa25.13■■□□□ 1.61
VPS51-215ENST00000534557 CASZ1Q86V15 1759 aa25.13■■□□□ 1.61
VPS51-215ENST00000534557 POLD1P28340 1107 aa25.12■■□□□ 1.61
VPS51-215ENST00000534557 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
VPS51-215ENST00000534557 ARXQ96QS3 562 aa25.12■■□□□ 1.61
VPS51-215ENST00000534557 RGPD2P0DJD1 1756 aa25.12■■□□□ 1.61
VPS51-215ENST00000534557 SMARCC1Q92922 1105 aaPredicted RBP25.11■■□□□ 1.61
VPS51-215ENST00000534557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.11■■□□□ 1.61
VPS51-215ENST00000534557 YY1P25490 414 aa25.1■■□□□ 1.61
VPS51-215ENST00000534557 EYA1Q99502 592 aa25.1■■□□□ 1.61
VPS51-215ENST00000534557 KNSTRNQ9Y448 316 aa25.1■■□□□ 1.61
VPS51-215ENST00000534557 CYP27B1O15528 508 aa25.09■■□□□ 1.61
VPS51-215ENST00000534557 KCNQ4P56696 695 aa25.09■■□□□ 1.61
VPS51-215ENST00000534557 FHDC1Q9C0D6 1143 aaPredicted RBP25.09■■□□□ 1.61
VPS51-215ENST00000534557 MSH5O43196 834 aa25.08■■□□□ 1.61
VPS51-215ENST00000534557 MORC1Q86VD1 984 aa25.08■■□□□ 1.61
VPS51-215ENST00000534557 SYT17Q9BSW7 474 aa25.08■■□□□ 1.61
VPS51-215ENST00000534557 NSD2O96028 1365 aa25.07■■□□□ 1.6
VPS51-215ENST00000534557 SGIP1Q9BQI5 828 aa25.06■■□□□ 1.6
VPS51-215ENST00000534557 NKX1-1Q15270 411 aaPredicted RBP25.05■■□□□ 1.6
VPS51-215ENST00000534557 IFNL2Q8IZJ0 200 aa25.05■■□□□ 1.6
VPS51-215ENST00000534557 DOT1LQ8TEK3 1739 aa25.05■■□□□ 1.6
VPS51-215ENST00000534557 PNPLA7Q6ZV29 1317 aa25.05■■□□□ 1.6
VPS51-215ENST00000534557 EIF4A2Q14240 407 aaKnown RBP25.04■■□□□ 1.6
VPS51-215ENST00000534557 FLAD1Q8NFF5 587 aa25.04■■□□□ 1.6
VPS51-215ENST00000534557 PAPPAQ13219 1627 aa25.04■■□□□ 1.6
VPS51-215ENST00000534557 TMOD3Q9NYL9 352 aa25.02■■□□□ 1.6
VPS51-215ENST00000534557 PALLDQ8WX93 1383 aa25.02■■□□□ 1.6
VPS51-215ENST00000534557 MAP2P11137 1827 aaKnown RBP25.01■■□□□ 1.59
VPS51-215ENST00000534557 SHANK3Q9BYB0 1731 aa25■■□□□ 1.59
VPS51-215ENST00000534557 KLHL34Q8N239 644 aa25■■□□□ 1.59
VPS51-215ENST00000534557 PIGBQ92521 554 aa25■■□□□ 1.59
VPS51-215ENST00000534557 NCAPD2Q15021 1401 aa25■■□□□ 1.59
VPS51-215ENST00000534557 HSP90AB1P08238 724 aaKnown RBP24.99■■□□□ 1.59
VPS51-215ENST00000534557 PLEKHO1Q53GL0 409 aaPredicted RBP24.99■■□□□ 1.59
VPS51-215ENST00000534557 PLEKHG2Q9H7P9 1386 aa24.98■■□□□ 1.59
VPS51-215ENST00000534557 PHKG2P15735 406 aa24.98■■□□□ 1.59
VPS51-215ENST00000534557 AMOTQ4VCS5 1084 aa24.97■■□□□ 1.59
VPS51-215ENST00000534557 AK7Q96M32 723 aa24.97■■□□□ 1.59
VPS51-215ENST00000534557 MAP3K5Q99683 1374 aa24.96■■□□□ 1.59
VPS51-215ENST00000534557 COL23A1Q86Y22 540 aaPredicted RBP24.96■■□□□ 1.59
VPS51-215ENST00000534557 LY75O60449 1722 aa24.95■■□□□ 1.59
VPS51-215ENST00000534557 IGSF1Q8N6C5 1336 aa24.95■■□□□ 1.58
VPS51-215ENST00000534557 ANKRD26Q9UPS8 1709 aa24.95■■□□□ 1.58
VPS51-215ENST00000534557 GPR162Q16538 588 aa24.94■■□□□ 1.58
VPS51-215ENST00000534557 LOC102724428A0A0B4J2F2 783 aa24.92■■□□□ 1.58
VPS51-215ENST00000534557 ERVV-2B6SEH9 535 aa24.92■■□□□ 1.58
VPS51-215ENST00000534557 SIK1P57059 783 aa24.92■■□□□ 1.58
VPS51-215ENST00000534557 DCAF5Q96JK2 942 aa24.92■■□□□ 1.58
VPS51-215ENST00000534557 QSER1Q2KHR3 1735 aa24.92■■□□□ 1.58
VPS51-215ENST00000534557 C1orf141Q5JVX7 400 aa24.91■■□□□ 1.58
VPS51-215ENST00000534557 PKD1L3Q7Z443 1732 aa24.91■■□□□ 1.58
VPS51-215ENST00000534557 KIF7Q2M1P5 1343 aa24.9■■□□□ 1.58
VPS51-215ENST00000534557 ATP6V1AP38606 617 aa24.9■■□□□ 1.58
VPS51-215ENST00000534557 ZNF530Q6P9A1 599 aaPredicted RBP24.89■■□□□ 1.58
VPS51-215ENST00000534557 ASAP1Q9ULH1 1129 aa24.89■■□□□ 1.58
VPS51-215ENST00000534557 MTHFSP49914 203 aa24.87■■□□□ 1.57
VPS51-215ENST00000534557 CABP4P57796 275 aa24.87■■□□□ 1.57
VPS51-215ENST00000534557 AMER1Q5JTC6 1135 aaPredicted RBP24.87■■□□□ 1.57
VPS51-215ENST00000534557 MSL1Q68DK7 614 aa24.87■■□□□ 1.57
VPS51-215ENST00000534557 SULT6B1Q6IMI4 303 aa24.87■■□□□ 1.57
VPS51-215ENST00000534557 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
VPS51-215ENST00000534557 SSFA2P28290 1259 aa24.86■■□□□ 1.57
VPS51-215ENST00000534557 ATG3Q9NT62 314 aa24.86■■□□□ 1.57
VPS51-215ENST00000534557 PHF14O94880 888 aa24.85■■□□□ 1.57
VPS51-215ENST00000534557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.84■■□□□ 1.57
VPS51-215ENST00000534557 RBM42Q9BTD8 480 aaKnown RBP24.84■■□□□ 1.57
VPS51-215ENST00000534557 ITGB4P16144 1822 aa24.83■■□□□ 1.57
VPS51-215ENST00000534557 C5P01031 1676 aa24.82■■□□□ 1.56
VPS51-215ENST00000534557 GNPATO15228 680 aa24.82■■□□□ 1.56
VPS51-215ENST00000534557 IL13P35225 146 aa24.82■■□□□ 1.56
VPS51-215ENST00000534557 LINC00116Q8NCU8 138 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms