RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 SOS1Q07889 1333 aaPredicted RBP17.08■□□□□ 0.32
BEST1-208ENST00000534553 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
BEST1-208ENST00000534553 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
BEST1-208ENST00000534553 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
BEST1-208ENST00000534553 ABCC6O95255 1503 aa17.07■□□□□ 0.32
BEST1-208ENST00000534553 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
BEST1-208ENST00000534553 MRPL50Q8N5N7 158 aaKnown RBP17.07■□□□□ 0.32
BEST1-208ENST00000534553 STRCQ7RTU9 1775 aa17.07■□□□□ 0.32
BEST1-208ENST00000534553 MCM10Q7L590 875 aa17.06■□□□□ 0.32
BEST1-208ENST00000534553 API5Q9BZZ5 524 aaKnown RBP17.05■□□□□ 0.32
BEST1-208ENST00000534553 RWDD1Q9H446 243 aaPredicted RBP17.05■□□□□ 0.32
BEST1-208ENST00000534553 PLEKHG2Q9H7P9 1386 aa17.05■□□□□ 0.32
BEST1-208ENST00000534553 LMOD2Q6P5Q4 547 aa17.05■□□□□ 0.32
BEST1-208ENST00000534553 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
BEST1-208ENST00000534553 LTV1Q96GA3 475 aaPredicted RBP17.05■□□□□ 0.32
BEST1-208ENST00000534553 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
BEST1-208ENST00000534553 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
BEST1-208ENST00000534553 TSPYL6Q8N831 410 aa17.04■□□□□ 0.32
BEST1-208ENST00000534553 C8orf58Q8NAV2 365 aa17.04■□□□□ 0.32
BEST1-208ENST00000534553 CAMTA1Q9Y6Y1 1673 aa17.03■□□□□ 0.32
BEST1-208ENST00000534553 AMOTQ4VCS5 1084 aa17.03■□□□□ 0.32
BEST1-208ENST00000534553 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
BEST1-208ENST00000534553 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
BEST1-208ENST00000534553 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.31
BEST1-208ENST00000534553 NBPF4Q96M43 638 aa17.02■□□□□ 0.31
BEST1-208ENST00000534553 PXDNQ92626 1479 aa17.02■□□□□ 0.31
BEST1-208ENST00000534553 MED1Q15648 1581 aaPredicted RBP17.02■□□□□ 0.31
BEST1-208ENST00000534553 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
BEST1-208ENST00000534553 CHMP4AQ9BY43 222 aa17.01■□□□□ 0.31
BEST1-208ENST00000534553 ABCC4O15439 1325 aa17.01■□□□□ 0.31
BEST1-208ENST00000534553 PTPRCP08575 1304 aa17.01■□□□□ 0.31
BEST1-208ENST00000534553 IGHDP01880 384 aa17■□□□□ 0.31
BEST1-208ENST00000534553 HDAC1Q13547 482 aaPredicted RBP17■□□□□ 0.31
BEST1-208ENST00000534553 PLEKHO1Q53GL0 409 aaPredicted RBP17■□□□□ 0.31
BEST1-208ENST00000534553 OVOS2A0A0G2JMS6 1433 aa17■□□□□ 0.31
BEST1-208ENST00000534553 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
BEST1-208ENST00000534553 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
BEST1-208ENST00000534553 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
BEST1-208ENST00000534553 SPATA31A3Q5VYP0 1347 aa16.99■□□□□ 0.31
BEST1-208ENST00000534553 CEMIPQ8WUJ3 1361 aa16.99■□□□□ 0.31
BEST1-208ENST00000534553 ELL2O00472 640 aaPredicted RBP16.99■□□□□ 0.31
BEST1-208ENST00000534553 ZBTB40Q9NUA8 1239 aa16.99■□□□□ 0.31
BEST1-208ENST00000534553 ZBTB7CA1YPR0 619 aa16.98■□□□□ 0.31
BEST1-208ENST00000534553 PDE4AP27815 886 aa16.98■□□□□ 0.31
BEST1-208ENST00000534553 TAF7Q15545 349 aaPredicted RBP16.98■□□□□ 0.31
BEST1-208ENST00000534553 BACH2Q9BYV9 841 aa16.98■□□□□ 0.31
BEST1-208ENST00000534553 ERBB3P21860 1342 aa16.98■□□□□ 0.31
BEST1-208ENST00000534553 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
BEST1-208ENST00000534553 CPDO75976 1380 aa16.97■□□□□ 0.31
BEST1-208ENST00000534553 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.31
BEST1-208ENST00000534553 FAM208AQ9UK61 1670 aaKnown RBP16.96■□□□□ 0.31
BEST1-208ENST00000534553 BRINP3Q76B58 766 aa16.96■□□□□ 0.31
BEST1-208ENST00000534553 USHBP1Q8N6Y0 703 aa16.96■□□□□ 0.31
BEST1-208ENST00000534553 IL17REQ8NFR9 667 aa16.96■□□□□ 0.3
BEST1-208ENST00000534553 ZNF335Q9H4Z2 1342 aaPredicted RBP16.95■□□□□ 0.3
BEST1-208ENST00000534553 ANP32AP39687 249 aaKnown RBP16.94■□□□□ 0.3
BEST1-208ENST00000534553 FAM161AQ3B820 660 aa16.94■□□□□ 0.3
BEST1-208ENST00000534553 C1orf141Q5JVX7 400 aa16.94■□□□□ 0.3
BEST1-208ENST00000534553 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
BEST1-208ENST00000534553 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
BEST1-208ENST00000534553 HOXB7P09629 217 aa16.93■□□□□ 0.3
BEST1-208ENST00000534553 LRRC59Q96AG4 307 aaKnown RBP16.93■□□□□ 0.3
BEST1-208ENST00000534553 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
BEST1-208ENST00000534553 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
BEST1-208ENST00000534553 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
BEST1-208ENST00000534553 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
BEST1-208ENST00000534553 ZNF530Q6P9A1 599 aaPredicted RBP16.93■□□□□ 0.3
BEST1-208ENST00000534553 AXIN2Q9Y2T1 843 aa16.93■□□□□ 0.3
BEST1-208ENST00000534553 SOS2Q07890 1332 aaPredicted RBP16.93■□□□□ 0.3
BEST1-208ENST00000534553 ZC3H6P61129 1189 aaKnown RBP16.92■□□□□ 0.3
BEST1-208ENST00000534553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.92■□□□□ 0.3
BEST1-208ENST00000534553 RGPD2P0DJD1 1756 aa16.91■□□□□ 0.3
BEST1-208ENST00000534553 RGS3P49796 1198 aa16.91■□□□□ 0.3
BEST1-208ENST00000534553 TEFQ10587 303 aa16.91■□□□□ 0.3
BEST1-208ENST00000534553 SMC5Q8IY18 1101 aa16.91■□□□□ 0.3
BEST1-208ENST00000534553 COL18A1P39060 1754 aa16.91■□□□□ 0.3
BEST1-208ENST00000534553 SLC4A2P04920 1241 aa16.9■□□□□ 0.3
BEST1-208ENST00000534553 KRT24Q2M2I5 525 aa16.9■□□□□ 0.3
BEST1-208ENST00000534553 RAPGEF4Q8WZA2 1011 aa16.9■□□□□ 0.3
BEST1-208ENST00000534553 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
BEST1-208ENST00000534553 RGS12O14924 1447 aa16.9■□□□□ 0.3
BEST1-208ENST00000534553 DDX17Q92841 729 aaKnown RBP16.89■□□□□ 0.29
BEST1-208ENST00000534553 GCC1Q96CN9 775 aa16.89■□□□□ 0.29
BEST1-208ENST00000534553 CCT4P50991 539 aaKnown RBP16.88■□□□□ 0.29
BEST1-208ENST00000534553 PDZRN3Q9UPQ7 1066 aa16.88■□□□□ 0.29
BEST1-208ENST00000534553 CACNA1FO60840 1977 aa16.88■□□□□ 0.29
BEST1-208ENST00000534553 ADAMTS7Q9UKP4 1686 aa16.87■□□□□ 0.29
BEST1-208ENST00000534553 TATP17735 454 aaPredicted RBP16.87■□□□□ 0.29
BEST1-208ENST00000534553 SPG7Q9UQ90 795 aa16.87■□□□□ 0.29
BEST1-208ENST00000534553 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
BEST1-208ENST00000534553 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
BEST1-208ENST00000534553 PLEKHG5O94827 1062 aa16.86■□□□□ 0.29
BEST1-208ENST00000534553 SKAP1Q86WV1 359 aa16.86■□□□□ 0.29
BEST1-208ENST00000534553 NLRP2Q9NX02 1062 aa16.86■□□□□ 0.29
BEST1-208ENST00000534553 RGPD5Q99666 1765 aa16.86■□□□□ 0.29
BEST1-208ENST00000534553 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
BEST1-208ENST00000534553 PXDNLA1KZ92 1463 aa16.85■□□□□ 0.29
BEST1-208ENST00000534553 CSB-PGBD3P0DP91 1061 aa16.85■□□□□ 0.29
BEST1-208ENST00000534553 C8orf34Q49A92 452 aa16.85■□□□□ 0.29
BEST1-208ENST00000534553 BTBD11A6QL63 1104 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms