RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 NBPF6Q5VWK0 638 aa24.7■■□□□ 1.54
RECQL4-207ENST00000534538 NBPF4Q96M43 638 aa24.7■■□□□ 1.54
RECQL4-207ENST00000534538 ARXQ96QS3 562 aa24.7■■□□□ 1.54
RECQL4-207ENST00000534538 SLC16A10Q8TF71 515 aa24.69■■□□□ 1.54
RECQL4-207ENST00000534538 SYTL4Q96C24 671 aaPredicted RBP24.68■■□□□ 1.54
RECQL4-207ENST00000534538 MEGF6O75095 1541 aa24.66■■□□□ 1.54
RECQL4-207ENST00000534538 MAP3K5Q99683 1374 aa24.66■■□□□ 1.54
RECQL4-207ENST00000534538 NSD2O96028 1365 aa24.65■■□□□ 1.54
RECQL4-207ENST00000534538 KIF24Q5T7B8 1368 aa24.65■■□□□ 1.54
RECQL4-207ENST00000534538 RGPD2P0DJD1 1756 aa24.65■■□□□ 1.54
RECQL4-207ENST00000534538 SMG6Q86US8 1419 aaKnown RBP24.64■■□□□ 1.54
RECQL4-207ENST00000534538 RAPGEF4Q8WZA2 1011 aa24.64■■□□□ 1.54
RECQL4-207ENST00000534538 TIMELESSQ9UNS1 1208 aa24.64■■□□□ 1.54
RECQL4-207ENST00000534538 INSRP06213 1382 aa24.64■■□□□ 1.53
RECQL4-207ENST00000534538 TFCP2L1Q9NZI6 479 aa24.63■■□□□ 1.53
RECQL4-207ENST00000534538 HSP90AB2PQ58FF8 381 aa24.62■■□□□ 1.53
RECQL4-207ENST00000534538 USHBP1Q8N6Y0 703 aa24.62■■□□□ 1.53
RECQL4-207ENST00000534538 PNPLA7Q6ZV29 1317 aa24.61■■□□□ 1.53
RECQL4-207ENST00000534538 SHANK3Q9BYB0 1731 aa24.61■■□□□ 1.53
RECQL4-207ENST00000534538 KCNQ4P56696 695 aa24.61■■□□□ 1.53
RECQL4-207ENST00000534538 CARD14Q9BXL6 1004 aa24.61■■□□□ 1.53
RECQL4-207ENST00000534538 QSER1Q2KHR3 1735 aa24.61■■□□□ 1.53
RECQL4-207ENST00000534538 FLT4P35916 1363 aa24.6■■□□□ 1.53
RECQL4-207ENST00000534538 TATP17735 454 aaPredicted RBP24.6■■□□□ 1.53
RECQL4-207ENST00000534538 DOT1LQ8TEK3 1739 aa24.59■■□□□ 1.53
RECQL4-207ENST00000534538 POLD1P28340 1107 aa24.59■■□□□ 1.53
RECQL4-207ENST00000534538 CCNL1Q9UK58 526 aaPredicted RBP24.59■■□□□ 1.53
RECQL4-207ENST00000534538 LY75O60449 1722 aa24.58■■□□□ 1.53
RECQL4-207ENST00000534538 UTRNP46939 3433 aa24.58■■□□□ 1.52
RECQL4-207ENST00000534538 HMGB2P26583 209 aaKnown RBP24.57■■□□□ 1.52
RECQL4-207ENST00000534538 PCDH11XQ9BZA7 1347 aa24.56■■□□□ 1.52
RECQL4-207ENST00000534538 PCDH11YQ9BZA8 1340 aa24.56■■□□□ 1.52
RECQL4-207ENST00000534538 KIF20BQ96Q89 1820 aa24.55■■□□□ 1.52
RECQL4-207ENST00000534538 COL24A1Q17RW2 1714 aa24.55■■□□□ 1.52
RECQL4-207ENST00000534538 ZNF784Q8NCA9 323 aaPredicted RBP24.53■■□□□ 1.52
RECQL4-207ENST00000534538 EMILIN1Q9Y6C2 1016 aa24.53■■□□□ 1.52
RECQL4-207ENST00000534538 NSD3Q9BZ95 1437 aa24.52■■□□□ 1.52
RECQL4-207ENST00000534538 CLSPNQ9HAW4 1339 aa24.52■■□□□ 1.52
RECQL4-207ENST00000534538 CYP27B1O15528 508 aa24.51■■□□□ 1.51
RECQL4-207ENST00000534538 COL23A1Q86Y22 540 aaPredicted RBP24.5■■□□□ 1.51
RECQL4-207ENST00000534538 WASHC2AQ641Q2 1341 aa24.5■■□□□ 1.51
RECQL4-207ENST00000534538 TUBGCP6Q96RT7 1819 aa24.49■■□□□ 1.51
RECQL4-207ENST00000534538 GPR162Q16538 588 aa24.49■■□□□ 1.51
RECQL4-207ENST00000534538 CHD4Q14839 1912 aa24.48■■□□□ 1.51
RECQL4-207ENST00000534538 NCAPD2Q15021 1401 aa24.48■■□□□ 1.51
RECQL4-207ENST00000534538 MPRIPQ6WCQ1 1025 aa24.48■■□□□ 1.51
RECQL4-207ENST00000534538 NKX1-1Q15270 411 aaPredicted RBP24.47■■□□□ 1.51
RECQL4-207ENST00000534538 PALLDQ8WX93 1383 aa24.46■■□□□ 1.51
RECQL4-207ENST00000534538 PPM1GO15355 546 aaPredicted RBP24.46■■□□□ 1.51
RECQL4-207ENST00000534538 MSH5O43196 834 aa24.46■■□□□ 1.51
RECQL4-207ENST00000534538 KLHL34Q8N239 644 aa24.46■■□□□ 1.51
RECQL4-207ENST00000534538 FLAD1Q8NFF5 587 aa24.46■■□□□ 1.51
RECQL4-207ENST00000534538 SMARCC1Q92922 1105 aaPredicted RBP24.46■■□□□ 1.51
RECQL4-207ENST00000534538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.45■■□□□ 1.5
RECQL4-207ENST00000534538 SPG7Q9UQ90 795 aa24.45■■□□□ 1.5
RECQL4-207ENST00000534538 EYA1Q99502 592 aa24.44■■□□□ 1.5
RECQL4-207ENST00000534538 POLKQ9UBT6 870 aa24.44■■□□□ 1.5
RECQL4-207ENST00000534538 NLGN2Q8NFZ4 835 aa24.42■■□□□ 1.5
RECQL4-207ENST00000534538 PIGBQ92521 554 aa24.42■■□□□ 1.5
RECQL4-207ENST00000534538 PKD1L3Q7Z443 1732 aa24.41■■□□□ 1.5
RECQL4-207ENST00000534538 ANKRD26Q9UPS8 1709 aa24.41■■□□□ 1.5
RECQL4-207ENST00000534538 C5P01031 1676 aa24.4■■□□□ 1.5
RECQL4-207ENST00000534538 GOLGB1Q14789 3259 aaKnown RBP24.39■■□□□ 1.5
RECQL4-207ENST00000534538 MAP2P11137 1827 aaKnown RBP24.39■■□□□ 1.49
RECQL4-207ENST00000534538 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
RECQL4-207ENST00000534538 ITGB4P16144 1822 aa24.38■■□□□ 1.49
RECQL4-207ENST00000534538 MSL1Q68DK7 614 aa24.37■■□□□ 1.49
RECQL4-207ENST00000534538 PELP1Q8IZL8 1130 aaKnown RBP24.37■■□□□ 1.49
RECQL4-207ENST00000534538 TOGARAM1Q9Y4F4 1720 aa24.37■■□□□ 1.49
RECQL4-207ENST00000534538 TAF1LQ8IZX4 1826 aa24.37■■□□□ 1.49
RECQL4-207ENST00000534538 GRIN3BO60391 1043 aa24.36■■□□□ 1.49
RECQL4-207ENST00000534538 IFNL2Q8IZJ0 200 aa24.36■■□□□ 1.49
RECQL4-207ENST00000534538 AK7Q96M32 723 aa24.36■■□□□ 1.49
RECQL4-207ENST00000534538 CD2APQ9Y5K6 639 aa24.36■■□□□ 1.49
RECQL4-207ENST00000534538 PLEKHG2Q9H7P9 1386 aa24.36■■□□□ 1.49
RECQL4-207ENST00000534538 LOC102724428A0A0B4J2F2 783 aa24.34■■□□□ 1.49
RECQL4-207ENST00000534538 PHKG2P15735 406 aa24.34■■□□□ 1.49
RECQL4-207ENST00000534538 SIK1P57059 783 aa24.34■■□□□ 1.49
RECQL4-207ENST00000534538 EIF4G2P78344 907 aaKnown RBP eCLIP24.34■■□□□ 1.49
RECQL4-207ENST00000534538 EIF4A2Q14240 407 aaKnown RBP24.34■■□□□ 1.49
RECQL4-207ENST00000534538 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
RECQL4-207ENST00000534538 TMOD3Q9NYL9 352 aa24.34■■□□□ 1.49
RECQL4-207ENST00000534538 C4BP0C0L5 1744 aa24.33■■□□□ 1.49
RECQL4-207ENST00000534538 YBX3P16989 372 aaKnown RBP eCLIP24.33■■□□□ 1.49
RECQL4-207ENST00000534538 TNNT2P45379 298 aaPredicted RBP24.32■■□□□ 1.48
RECQL4-207ENST00000534538 AMIGO3Q86WK7 504 aa24.32■■□□□ 1.48
RECQL4-207ENST00000534538 PANK3Q9H999 370 aa24.31■■□□□ 1.48
RECQL4-207ENST00000534538 ASAP1Q9ULH1 1129 aa24.31■■□□□ 1.48
RECQL4-207ENST00000534538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.3■■□□□ 1.48
RECQL4-207ENST00000534538 HSPA5P11021 654 aaKnown RBP24.3■■□□□ 1.48
RECQL4-207ENST00000534538 SSFA2P28290 1259 aa24.3■■□□□ 1.48
RECQL4-207ENST00000534538 C1QTNF8P60827 252 aa24.3■■□□□ 1.48
RECQL4-207ENST00000534538 LINC00116Q8NCU8 138 aa24.3■■□□□ 1.48
RECQL4-207ENST00000534538 IGSF1Q8N6C5 1336 aa24.28■■□□□ 1.48
RECQL4-207ENST00000534538 PHF14O94880 888 aa24.27■■□□□ 1.48
RECQL4-207ENST00000534538 ATG3Q9NT62 314 aa24.27■■□□□ 1.48
RECQL4-207ENST00000534538 UBR3Q6ZT12 1888 aa24.27■■□□□ 1.48
RECQL4-207ENST00000534538 ERVV-2B6SEH9 535 aa24.26■■□□□ 1.47
RECQL4-207ENST00000534538 ATP6V1AP38606 617 aa24.26■■□□□ 1.47
RECQL4-207ENST00000534538 ITPK1Q13572 414 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms