RNA–Protein interactions for RNA: ENST00000534390.2

PAX6-230, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-230ENST00000534390 NHSQ6T4R5 1651 aa21.61■■□□□ 1.05
PAX6-230ENST00000534390 PER1O15534 1290 aaPredicted RBP21.61■■□□□ 1.05
PAX6-230ENST00000534390 KCNQ2O43526 872 aa21.61■■□□□ 1.05
PAX6-230ENST00000534390 PARD3Q8TEW0 1356 aa21.61■■□□□ 1.05
PAX6-230ENST00000534390 PSDA5PKW4 1024 aaPredicted RBP21.6■■□□□ 1.05
PAX6-230ENST00000534390 EYA1Q99502 592 aa21.6■■□□□ 1.05
PAX6-230ENST00000534390 SHANK3Q9BYB0 1731 aa21.6■■□□□ 1.05
PAX6-230ENST00000534390 SYTL4Q96C24 671 aaPredicted RBP21.59■■□□□ 1.05
PAX6-230ENST00000534390 RREB1Q92766 1687 aa21.59■■□□□ 1.05
PAX6-230ENST00000534390 NUP188Q5SRE5 1749 aa21.57■■□□□ 1.04
PAX6-230ENST00000534390 DOT1LQ8TEK3 1739 aa21.57■■□□□ 1.04
PAX6-230ENST00000534390 PCDH11XQ9BZA7 1347 aa21.56■■□□□ 1.04
PAX6-230ENST00000534390 PCDH11YQ9BZA8 1340 aa21.56■■□□□ 1.04
PAX6-230ENST00000534390 MTHFSP49914 203 aa21.55■■□□□ 1.04
PAX6-230ENST00000534390 R3HDM1Q15032 1099 aaKnown RBP21.55■■□□□ 1.04
PAX6-230ENST00000534390 BTAF1O14981 1849 aa21.55■■□□□ 1.04
PAX6-230ENST00000534390 RGPD3A6NKT7 1758 aaPredicted RBP21.54■■□□□ 1.04
PAX6-230ENST00000534390 RGPD4Q7Z3J3 1758 aa21.54■■□□□ 1.04
PAX6-230ENST00000534390 NCAPD2Q15021 1401 aa21.54■■□□□ 1.04
PAX6-230ENST00000534390 PLSCR1O15162 318 aa21.53■■□□□ 1.04
PAX6-230ENST00000534390 NBPF14Q5TI25 921 aa21.53■■□□□ 1.04
PAX6-230ENST00000534390 SPG7Q9UQ90 795 aa21.53■■□□□ 1.04
PAX6-230ENST00000534390 PKD1L3Q7Z443 1732 aa21.52■■□□□ 1.04
PAX6-230ENST00000534390 NPC1L1Q9UHC9 1359 aa21.52■■□□□ 1.04
PAX6-230ENST00000534390 PRIM1P49642 420 aaKnown RBP21.52■■□□□ 1.04
PAX6-230ENST00000534390 IGSF1Q8N6C5 1336 aa21.52■■□□□ 1.03
PAX6-230ENST00000534390 CYP27B1O15528 508 aa21.49■■□□□ 1.03
PAX6-230ENST00000534390 TXNRD1Q16881 649 aa21.49■■□□□ 1.03
PAX6-230ENST00000534390 AEBP1Q8IUX7 1158 aa21.48■■□□□ 1.03
PAX6-230ENST00000534390 IL13P35225 146 aa21.47■■□□□ 1.03
PAX6-230ENST00000534390 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
PAX6-230ENST00000534390 ZEB1P37275 1124 aaPredicted RBP21.46■■□□□ 1.03
PAX6-230ENST00000534390 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
PAX6-230ENST00000534390 PROM2Q8N271 834 aa21.45■■□□□ 1.02
PAX6-230ENST00000534390 MPRIPQ6WCQ1 1025 aa21.44■■□□□ 1.02
PAX6-230ENST00000534390 ANO8Q9HCE9 1232 aaPredicted RBP21.44■■□□□ 1.02
PAX6-230ENST00000534390 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.44■■□□□ 1.02
PAX6-230ENST00000534390 TOGARAM1Q9Y4F4 1720 aa21.43■■□□□ 1.02
PAX6-230ENST00000534390 HMOX1P09601 288 aa21.43■■□□□ 1.02
PAX6-230ENST00000534390 PLEKHO1Q53GL0 409 aaPredicted RBP21.43■■□□□ 1.02
PAX6-230ENST00000534390 IFNL2Q8IZJ0 200 aa21.43■■□□□ 1.02
PAX6-230ENST00000534390 U2SURPO15042 1029 aaKnown RBP21.42■■□□□ 1.02
PAX6-230ENST00000534390 PHKG2P15735 406 aa21.42■■□□□ 1.02
PAX6-230ENST00000534390 ZNF530Q6P9A1 599 aaPredicted RBP21.42■■□□□ 1.02
PAX6-230ENST00000534390 STK32BQ9NY57 414 aa21.42■■□□□ 1.02
PAX6-230ENST00000534390 CFAP53Q96M91 514 aa21.41■■□□□ 1.02
PAX6-230ENST00000534390 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
PAX6-230ENST00000534390 ITGB4P16144 1822 aa21.4■■□□□ 1.02
PAX6-230ENST00000534390 KCNQ4P56696 695 aa21.39■■□□□ 1.01
PAX6-230ENST00000534390 AMOTQ4VCS5 1084 aa21.39■■□□□ 1.01
PAX6-230ENST00000534390 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.01
PAX6-230ENST00000534390 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.01
PAX6-230ENST00000534390 PLEKHG2Q9H7P9 1386 aa21.38■■□□□ 1.01
PAX6-230ENST00000534390 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
PAX6-230ENST00000534390 TMOD3Q9NYL9 352 aa21.38■■□□□ 1.01
PAX6-230ENST00000534390 KDRP35968 1356 aa21.37■■□□□ 1.01
PAX6-230ENST00000534390 NKX1-1Q15270 411 aaPredicted RBP21.37■■□□□ 1.01
PAX6-230ENST00000534390 LRRC4BQ9NT99 713 aa21.37■■□□□ 1.01
PAX6-230ENST00000534390 CCNL1Q9UK58 526 aaPredicted RBP21.37■■□□□ 1.01
PAX6-230ENST00000534390 SLC27A3Q5K4L6 730 aa21.36■■□□□ 1.01
PAX6-230ENST00000534390 PALLDQ8WX93 1383 aa21.36■■□□□ 1.01
PAX6-230ENST00000534390 LY75O60449 1722 aa21.35■■□□□ 1.01
PAX6-230ENST00000534390 HSP90AB1P08238 724 aaKnown RBP21.35■■□□□ 1.01
PAX6-230ENST00000534390 SLC15A2Q16348 729 aa21.35■■□□□ 1.01
PAX6-230ENST00000534390 LRP5O75197 1615 aa21.34■■□□□ 1.01
PAX6-230ENST00000534390 PIGBQ92521 554 aa21.34■■□□□ 1.01
PAX6-230ENST00000534390 PAPPAQ13219 1627 aa21.33■■□□□ 1.01
PAX6-230ENST00000534390 DCAF5Q96JK2 942 aa21.33■■□□□ 1.01
PAX6-230ENST00000534390 ZNF827Q17R98 1081 aa21.32■■□□□ 1
PAX6-230ENST00000534390 SMARCC1Q92922 1105 aaPredicted RBP21.32■■□□□ 1
PAX6-230ENST00000534390 NUDCQ9Y266 331 aa21.32■■□□□ 1
PAX6-230ENST00000534390 CABP4P57796 275 aa21.31■■□□□ 1
PAX6-230ENST00000534390 KDM6AO15550 1401 aaPredicted RBP21.3■■□□□ 1
PAX6-230ENST00000534390 PDGFDQ9GZP0 370 aaPredicted RBP21.3■■□□□ 1
PAX6-230ENST00000534390 SRCAPQ6ZRS2 3230 aa21.29■■□□□ 1
PAX6-230ENST00000534390 CASZ1Q86V15 1759 aa21.29■■□□□ 1
PAX6-230ENST00000534390 ZBTB7AO95365 584 aa21.29■■□□□ 1
PAX6-230ENST00000534390 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
PAX6-230ENST00000534390 ERVV-2B6SEH9 535 aa21.28■■□□□ 1
PAX6-230ENST00000534390 U2AF1L5P0DN76 240 aaPredicted RBP21.28■■□□□ 1
PAX6-230ENST00000534390 U2AF1Q01081 240 aaKnown RBP eCLIP21.28■■□□□ 1
PAX6-230ENST00000534390 ASAP1Q9ULH1 1129 aa21.28■■□□□ 1
PAX6-230ENST00000534390 C5P01031 1676 aa21.28■■□□□ 1
PAX6-230ENST00000534390 MTHFSDQ2M296 383 aaKnown RBP21.27■■□□□ 1
PAX6-230ENST00000534390 AKAP4Q5JQC9 854 aa21.27■■□□□ 1
PAX6-230ENST00000534390 SPON1Q9HCB6 807 aa21.27■■□□□ 1
PAX6-230ENST00000534390 PRKAR2BP31323 418 aa21.26■□□□□ 0.99
PAX6-230ENST00000534390 AKT1S1Q96B36 256 aa21.26■□□□□ 0.99
PAX6-230ENST00000534390 PPP1R1BQ9UD71 204 aaPredicted RBP21.26■□□□□ 0.99
PAX6-230ENST00000534390 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
PAX6-230ENST00000534390 LOC102724428A0A0B4J2F2 783 aa21.24■□□□□ 0.99
PAX6-230ENST00000534390 MSH5O43196 834 aa21.24■□□□□ 0.99
PAX6-230ENST00000534390 SIK1P57059 783 aa21.24■□□□□ 0.99
PAX6-230ENST00000534390 RALBP1Q15311 655 aa21.24■□□□□ 0.99
PAX6-230ENST00000534390 RBM42Q9BTD8 480 aaKnown RBP21.24■□□□□ 0.99
PAX6-230ENST00000534390 ATG3Q9NT62 314 aa21.24■□□□□ 0.99
PAX6-230ENST00000534390 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
PAX6-230ENST00000534390 TUBGCP6Q96RT7 1819 aa21.24■□□□□ 0.99
PAX6-230ENST00000534390 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
PAX6-230ENST00000534390 TAF1LQ8IZX4 1826 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms