RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 VASH1Q7L8A9 365 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-208ENST00000534106 ATP1B4Q9UN42 357 aaPredicted RBP5.21□□□□□ -1.58
CHMP4A-208ENST00000534106 MADDQ8WXG6 1647 aa5.21□□□□□ -1.58
CHMP4A-208ENST00000534106 SPATA31D1Q6ZQQ2 1576 aa5.21□□□□□ -1.58
CHMP4A-208ENST00000534106 MAGEB6P1A0A0J9YX57 407 aa5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 PER1O15534 1290 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 HSPA1LP34931 641 aa5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 RANGAP1P46060 587 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 NBPF14Q5TI25 921 aa5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 HELBQ8NG08 1087 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 YEATS2Q9ULM3 1422 aa5.2□□□□□ -1.58
CHMP4A-208ENST00000534106 NR3C2P08235 984 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 FSHRP23945 695 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 PIP4K2BP78356 416 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 C4orf48Q5BLP8 95 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 LINC00528Q8N1L1 170 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 KLF16Q9BXK1 252 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 CARD14Q9BXL6 1004 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 ATP10BO94823 1461 aa5.19□□□□□ -1.58
CHMP4A-208ENST00000534106 IQGAP2Q13576 1575 aa5.18□□□□□ -1.58
CHMP4A-208ENST00000534106 PPFIA3O75145 1194 aa5.18□□□□□ -1.58
CHMP4A-208ENST00000534106 GRM5P41594 1212 aa5.18□□□□□ -1.58
CHMP4A-208ENST00000534106 MYSM1Q5VVJ2 828 aa5.18□□□□□ -1.58
CHMP4A-208ENST00000534106 LIMD1Q9UGP4 676 aa5.18□□□□□ -1.58
CHMP4A-208ENST00000534106 ZNF335Q9H4Z2 1342 aaPredicted RBP5.18□□□□□ -1.58
CHMP4A-208ENST00000534106 LORP23490 312 aaPredicted RBP5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 PDE4DQ08499 809 aa5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 QPCTQ16769 361 aa5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 CCDC116Q8IYX3 515 aa5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 TSEN34Q9BSV6 310 aaKnown RBP5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 EMILIN1Q9Y6C2 1016 aa5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 RIMS1Q86UR5 1692 aaKnown RBP5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 UGGT2Q9NYU1 1516 aa5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 BCORL1Q5H9F3 1711 aa5.17□□□□□ -1.58
CHMP4A-208ENST00000534106 PHLDB1Q86UU1 1377 aa5.16□□□□□ -1.58
CHMP4A-208ENST00000534106 FIGNL2A6NMB9 653 aa5.16□□□□□ -1.58
CHMP4A-208ENST00000534106 LILRB3O75022 631 aa5.16□□□□□ -1.58
CHMP4A-208ENST00000534106 CLK2P49760 499 aaKnown RBP5.16□□□□□ -1.58
CHMP4A-208ENST00000534106 MEIOBQ8N635 442 aa5.16□□□□□ -1.58
CHMP4A-208ENST00000534106 AKNAQ7Z591 1439 aa5.15□□□□□ -1.58
CHMP4A-208ENST00000534106 DENND4BO75064 1496 aaPredicted RBP5.15□□□□□ -1.58
CHMP4A-208ENST00000534106 RAPGEF2Q9Y4G8 1499 aa5.15□□□□□ -1.58
CHMP4A-208ENST00000534106 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.15□□□□□ -1.592e-13■■■□□ 15.3
CHMP4A-208ENST00000534106 RTL5Q5HYW3 569 aaPredicted RBP5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 AFAP1Q8N556 730 aa5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 RSPH6AQ9H0K4 717 aa5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 POLR3EQ9NVU0 708 aa5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 PGPEP1Q9NXJ5 209 aa5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 ABCA8O94911 1581 aa5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 SOS2Q07890 1332 aaPredicted RBP5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 KIAA0556O60303 1618 aa5.15□□□□□ -1.59
CHMP4A-208ENST00000534106 FRMPD1Q5SYB0 1578 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 PLEKHD1A6NEE1 506 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 TTLL8A6PVC2 850 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 VSIG8P0DPA2 414 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 TUSC1Q2TAM9 212 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 SH3RF1Q7Z6J0 888 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 ZBTB33Q86T24 672 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 GPKOWQ92917 476 aaPredicted RBP eCLIP5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 CNTNAP3BQ96NU0 1288 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 ARHGAP9Q9BRR9 750 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 C1QTNF2Q9BXJ5 285 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 CNTNAP3Q9BZ76 1288 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 SLC24A3Q9HC58 644 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 RGS17Q9UGC6 210 aaPredicted RBP5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 DNMT3LQ9UJW3 386 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 MAP4K5Q9Y4K4 846 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 LTBP4Q8N2S1 1624 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 POGZQ7Z3K3 1410 aa5.14□□□□□ -1.59
CHMP4A-208ENST00000534106 NEO1Q92859 1461 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 SRCAPQ6ZRS2 3230 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 CFAP43Q8NDM7 1665 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 SH3BP5LQ7L8J4 393 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 TRMT44Q8IYL2 757 aaKnown RBP5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 SLC10A4Q96EP9 437 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 PTPRTO14522 1441 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 FHOD3Q2V2M9 1422 aa5.13□□□□□ -1.59
CHMP4A-208ENST00000534106 SIGLEC1Q9BZZ2 1709 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 PTSQ03393 145 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 CTDSPL2Q05D32 466 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 CBLBQ13191 982 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 ERFEQ4G0M1 354 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 PPP1R26Q5T8A7 1209 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 FAM9AQ8IZU1 332 aaPredicted RBP5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 UHRF1BP1Q6BDS2 1440 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 SCAPERQ9BY12 1400 aa5.12□□□□□ -1.59
CHMP4A-208ENST00000534106 STRCQ7RTU9 1775 aa5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 CDC14CA4D256 554 aa5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 DHX9Q08211 1270 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 PDXDC2PQ6P474 469 aa5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 KCTD15Q96SI1 283 aaPredicted RBP5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 CDV3Q9UKY7 258 aaKnown RBP5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 FANCAO15360 1455 aa5.11□□□□□ -1.59
CHMP4A-208ENST00000534106 ATP10AO60312 1499 aa5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 RELBQ01201 579 aa5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 KCTD17Q8N5Z5 321 aa5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 CCDC155Q8N6L0 562 aa5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 GPR161Q8N6U8 529 aaKnown RBP5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 COL25A1Q9BXS0 654 aaPredicted RBP5.1□□□□□ -1.59
CHMP4A-208ENST00000534106 POLMQ9NP87 494 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 209.4 ms