RNA–Protein interactions for RNA: ENST00000533996.5

SOX9-AS1-213, SOX9 antisense RNA 1, humanhuman

TSL 5

Gene SOX9-AS1, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-213ENST00000533996 GOLGB1Q14789 3259 aaKnown RBP13.49□□□□□ -0.25
SOX9-AS1-213ENST00000533996 ZNF827Q17R98 1081 aa13.49□□□□□ -0.25
SOX9-AS1-213ENST00000533996 SLC27A3Q5K4L6 730 aa13.49□□□□□ -0.25
SOX9-AS1-213ENST00000533996 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
SOX9-AS1-213ENST00000533996 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
SOX9-AS1-213ENST00000533996 HSPA6P17066 643 aa13.48□□□□□ -0.25
SOX9-AS1-213ENST00000533996 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
SOX9-AS1-213ENST00000533996 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
SOX9-AS1-213ENST00000533996 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
SOX9-AS1-213ENST00000533996 LRRC4BQ9NT99 713 aa13.47□□□□□ -0.25
SOX9-AS1-213ENST00000533996 KAT6BQ8WYB5 2073 aa13.46□□□□□ -0.25
SOX9-AS1-213ENST00000533996 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
SOX9-AS1-213ENST00000533996 CLEC11AQ9Y240 323 aa13.46□□□□□ -0.25
SOX9-AS1-213ENST00000533996 TTC21AQ8NDW8 1320 aa13.45□□□□□ -0.26
SOX9-AS1-213ENST00000533996 IL2RBP14784 551 aa13.45□□□□□ -0.26
SOX9-AS1-213ENST00000533996 NLGN2Q8NFZ4 835 aa13.45□□□□□ -0.26
SOX9-AS1-213ENST00000533996 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
SOX9-AS1-213ENST00000533996 TTC21BQ7Z4L5 1316 aa13.44□□□□□ -0.26
SOX9-AS1-213ENST00000533996 GPBP1L1Q9HC44 474 aaPredicted RBP13.44□□□□□ -0.26
SOX9-AS1-213ENST00000533996 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
SOX9-AS1-213ENST00000533996 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
SOX9-AS1-213ENST00000533996 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
SOX9-AS1-213ENST00000533996 ATP10DQ9P241 1426 aa13.43□□□□□ -0.26
SOX9-AS1-213ENST00000533996 NFAT5O94916 1531 aa13.43□□□□□ -0.26
SOX9-AS1-213ENST00000533996 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
SOX9-AS1-213ENST00000533996 ERBB3P21860 1342 aa13.41□□□□□ -0.26
SOX9-AS1-213ENST00000533996 PRR29P0C7W0 189 aa13.41□□□□□ -0.26
SOX9-AS1-213ENST00000533996 HMGB2P26583 209 aaKnown RBP13.41□□□□□ -0.26
SOX9-AS1-213ENST00000533996 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
SOX9-AS1-213ENST00000533996 LY75O60449 1722 aa13.41□□□□□ -0.26
SOX9-AS1-213ENST00000533996 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
SOX9-AS1-213ENST00000533996 NLRP2Q9NX02 1062 aa13.4□□□□□ -0.26
SOX9-AS1-213ENST00000533996 SOX12O15370 315 aa13.39□□□□□ -0.27
SOX9-AS1-213ENST00000533996 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
SOX9-AS1-213ENST00000533996 ADCY9O60503 1353 aa13.39□□□□□ -0.27
SOX9-AS1-213ENST00000533996 LTN1O94822 1766 aa13.38□□□□□ -0.27
SOX9-AS1-213ENST00000533996 USP54Q70EL1 1684 aa13.38□□□□□ -0.27
SOX9-AS1-213ENST00000533996 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
SOX9-AS1-213ENST00000533996 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
SOX9-AS1-213ENST00000533996 APLP1P51693 650 aa13.36□□□□□ -0.27
SOX9-AS1-213ENST00000533996 KTN1Q86UP2 1357 aaKnown RBP13.35□□□□□ -0.27
SOX9-AS1-213ENST00000533996 FAM208AQ9UK61 1670 aaKnown RBP13.35□□□□□ -0.27
SOX9-AS1-213ENST00000533996 ANKRD24Q8TF21 1146 aa13.35□□□□□ -0.27
SOX9-AS1-213ENST00000533996 MON2Q7Z3U7 1717 aa13.35□□□□□ -0.27
SOX9-AS1-213ENST00000533996 COL23A1Q86Y22 540 aaPredicted RBP13.34□□□□□ -0.27
SOX9-AS1-213ENST00000533996 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
SOX9-AS1-213ENST00000533996 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
SOX9-AS1-213ENST00000533996 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
SOX9-AS1-213ENST00000533996 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
SOX9-AS1-213ENST00000533996 DOT1LQ8TEK3 1739 aa13.33□□□□□ -0.28
SOX9-AS1-213ENST00000533996 KIF3CO14782 793 aa13.32□□□□□ -0.28
SOX9-AS1-213ENST00000533996 KCNQ4P56696 695 aa13.32□□□□□ -0.28
SOX9-AS1-213ENST00000533996 DNAJC5GQ8N7S2 189 aa13.32□□□□□ -0.28
SOX9-AS1-213ENST00000533996 SYTL4Q96C24 671 aaPredicted RBP13.32□□□□□ -0.28
SOX9-AS1-213ENST00000533996 CCNL1Q9UK58 526 aaPredicted RBP13.32□□□□□ -0.28
SOX9-AS1-213ENST00000533996 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
SOX9-AS1-213ENST00000533996 NSD2O96028 1365 aa13.31□□□□□ -0.28
SOX9-AS1-213ENST00000533996 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
SOX9-AS1-213ENST00000533996 USP47Q96K76 1375 aa13.3□□□□□ -0.28
SOX9-AS1-213ENST00000533996 C5P01031 1676 aa13.29□□□□□ -0.28
SOX9-AS1-213ENST00000533996 ECM2O94769 699 aaPredicted RBP13.29□□□□□ -0.28
SOX9-AS1-213ENST00000533996 TOMM70O94826 608 aa13.29□□□□□ -0.28
SOX9-AS1-213ENST00000533996 IP6K1Q92551 441 aa13.29□□□□□ -0.28
SOX9-AS1-213ENST00000533996 TAF1LQ8IZX4 1826 aa13.28□□□□□ -0.28
SOX9-AS1-213ENST00000533996 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
SOX9-AS1-213ENST00000533996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.28□□□□□ -0.28
SOX9-AS1-213ENST00000533996 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
SOX9-AS1-213ENST00000533996 ZCRB1Q8TBF4 217 aaKnown RBP13.27□□□□□ -0.29
SOX9-AS1-213ENST00000533996 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
SOX9-AS1-213ENST00000533996 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
SOX9-AS1-213ENST00000533996 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
SOX9-AS1-213ENST00000533996 SBNO2Q9Y2G9 1366 aa13.25□□□□□ -0.29
SOX9-AS1-213ENST00000533996 CGNL1Q0VF96 1302 aa13.25□□□□□ -0.29
SOX9-AS1-213ENST00000533996 NME9Q86XW9 330 aa13.25□□□□□ -0.29
SOX9-AS1-213ENST00000533996 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
SOX9-AS1-213ENST00000533996 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
SOX9-AS1-213ENST00000533996 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
SOX9-AS1-213ENST00000533996 EDC4Q6P2E9 1401 aaKnown RBP13.23□□□□□ -0.29
SOX9-AS1-213ENST00000533996 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
SOX9-AS1-213ENST00000533996 CD163L1Q9NR16 1453 aa13.23□□□□□ -0.29
SOX9-AS1-213ENST00000533996 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
SOX9-AS1-213ENST00000533996 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
SOX9-AS1-213ENST00000533996 UBR3Q6ZT12 1888 aa13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 PRELPP51888 382 aa13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 COL13A1Q5TAT6 717 aaPredicted RBP13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 KLRG1Q96E93 195 aa13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
SOX9-AS1-213ENST00000533996 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
SOX9-AS1-213ENST00000533996 GSE1Q14687 1217 aa13.2□□□□□ -0.3
SOX9-AS1-213ENST00000533996 SMARCC1Q92922 1105 aaPredicted RBP13.2□□□□□ -0.3
SOX9-AS1-213ENST00000533996 AK7Q96M32 723 aa13.2□□□□□ -0.3
SOX9-AS1-213ENST00000533996 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
SOX9-AS1-213ENST00000533996 SSFA2P28290 1259 aa13.19□□□□□ -0.3
SOX9-AS1-213ENST00000533996 HOXC9P31274 260 aa13.19□□□□□ -0.3
SOX9-AS1-213ENST00000533996 TGFB2P61812 414 aa13.19□□□□□ -0.3
SOX9-AS1-213ENST00000533996 FSTL1Q12841 308 aa13.19□□□□□ -0.3
SOX9-AS1-213ENST00000533996 PUS7Q96PZ0 661 aaKnown RBP13.19□□□□□ -0.3
SOX9-AS1-213ENST00000533996 TOGARAM1Q9Y4F4 1720 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms